RNA–Protein interactions for RNA: ENST00000628364.2

NRXN1-228, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 2,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-228ENST00000628364 SNX21Q969T3 373 aa33.65■■■□□ 2.98
NRXN1-228ENST00000628364 RTF1Q92541 710 aaKnown RBP33.65■■■□□ 2.98
NRXN1-228ENST00000628364 RGS12O14924 1447 aa33.65■■■□□ 2.98
NRXN1-228ENST00000628364 CHMP5Q9NZZ3 219 aa33.64■■■□□ 2.98
NRXN1-228ENST00000628364 RIMS1Q86UR5 1692 aaKnown RBP33.64■■■□□ 2.98
NRXN1-228ENST00000628364 ANKARQ7Z5J8 1434 aa33.63■■■□□ 2.97
NRXN1-228ENST00000628364 SOX12O15370 315 aa33.63■■■□□ 2.97
NRXN1-228ENST00000628364 ANKRD44Q8N8A2 993 aa33.63■■■□□ 2.97
NRXN1-228ENST00000628364 AMPHP49418 695 aa33.62■■■□□ 2.97
NRXN1-228ENST00000628364 KRT24Q2M2I5 525 aa33.62■■■□□ 2.97
NRXN1-228ENST00000628364 GAS2L2Q8NHY3 880 aa33.61■■■□□ 2.97
NRXN1-228ENST00000628364 MTHFSDQ2M296 383 aaKnown RBP33.61■■■□□ 2.97
NRXN1-228ENST00000628364 IGSF1Q8N6C5 1336 aa33.6■■■□□ 2.97
NRXN1-228ENST00000628364 HTATSF1O43719 755 aaKnown RBP33.59■■■□□ 2.97
NRXN1-228ENST00000628364 XRN1Q8IZH2 1706 aaKnown RBP33.59■■■□□ 2.97
NRXN1-228ENST00000628364 FER1L4A9Z1Z3 1794 aa33.59■■■□□ 2.97
NRXN1-228ENST00000628364 TBC1D9Q6ZT07 1266 aa33.58■■■□□ 2.97
NRXN1-228ENST00000628364 CDC45O75419 566 aa33.57■■■□□ 2.96
NRXN1-228ENST00000628364 TSPYL4Q9UJ04 414 aa33.57■■■□□ 2.96
NRXN1-228ENST00000628364 ATP10DQ9P241 1426 aa33.57■■■□□ 2.96
NRXN1-228ENST00000628364 EYA1Q99502 592 aa33.56■■■□□ 2.96
NRXN1-228ENST00000628364 PIK3C2AO00443 1686 aa33.56■■■□□ 2.96
NRXN1-228ENST00000628364 SLC4A2P04920 1241 aa33.55■■■□□ 2.96
NRXN1-228ENST00000628364 SPRYD3Q8NCJ5 442 aa33.55■■■□□ 2.96
NRXN1-228ENST00000628364 RGPD8O14715 1765 aaPredicted RBP33.55■■■□□ 2.96
NRXN1-228ENST00000628364 PLEKHM2Q8IWE5 1019 aa33.54■■■□□ 2.96
NRXN1-228ENST00000628364 NCOA3Q9Y6Q9 1424 aa33.54■■■□□ 2.96
NRXN1-228ENST00000628364 CEP85Q6P2H3 762 aa33.54■■■□□ 2.96
NRXN1-228ENST00000628364 RTL1A6NKG5 1358 aa33.53■■■□□ 2.96
NRXN1-228ENST00000628364 FOXO3O43524 673 aa33.52■■■□□ 2.96
NRXN1-228ENST00000628364 NLRP6P59044 892 aa33.52■■■□□ 2.96
NRXN1-228ENST00000628364 MSH6P52701 1360 aa33.52■■■□□ 2.96
NRXN1-228ENST00000628364 MCM4P33991 863 aa33.5■■■□□ 2.95
NRXN1-228ENST00000628364 CCT4P50991 539 aaKnown RBP33.5■■■□□ 2.95
NRXN1-228ENST00000628364 CEP170BQ9Y4F5 1589 aaPredicted RBP33.5■■■□□ 2.95
NRXN1-228ENST00000628364 TTC22Q5TAA0 569 aa33.49■■■□□ 2.95
NRXN1-228ENST00000628364 PLPPR3Q6T4P5 718 aa33.49■■■□□ 2.95
NRXN1-228ENST00000628364 USP54Q70EL1 1684 aa33.48■■■□□ 2.95
NRXN1-228ENST00000628364 MIS18AQ9NYP9 233 aa33.48■■■□□ 2.95
NRXN1-228ENST00000628364 GSPT1P15170 499 aaKnown RBP33.48■■■□□ 2.95
NRXN1-228ENST00000628364 KIF2CQ99661 725 aa33.48■■■□□ 2.95
NRXN1-228ENST00000628364 HMMRO75330 724 aa33.47■■■□□ 2.95
NRXN1-228ENST00000628364 MEIS3Q99687 375 aa33.47■■■□□ 2.95
NRXN1-228ENST00000628364 SOS1Q07889 1333 aaPredicted RBP33.46■■■□□ 2.95
NRXN1-228ENST00000628364 KCNA6P17658 529 aa33.46■■■□□ 2.95
NRXN1-228ENST00000628364 HOXC9P31274 260 aa33.45■■■□□ 2.95
NRXN1-228ENST00000628364 DDIT3P35638 169 aa33.45■■■□□ 2.95
NRXN1-228ENST00000628364 CIZ1Q9ULV3 898 aaPredicted RBP33.45■■■□□ 2.95
NRXN1-228ENST00000628364 GNAT3A8MTJ3 354 aa33.44■■■□□ 2.94
NRXN1-228ENST00000628364 STK31Q9BXU1 1019 aa33.44■■■□□ 2.94
NRXN1-228ENST00000628364 HSP90AB1P08238 724 aaKnown RBP33.44■■■□□ 2.94
NRXN1-228ENST00000628364 IL27Q8NEV9 243 aa33.44■■■□□ 2.94
NRXN1-228ENST00000628364 BABAM1Q9NWV8 329 aa33.44■■■□□ 2.94
NRXN1-228ENST00000628364 LRRC37A3O60309 1634 aa33.42■■■□□ 2.94
NRXN1-228ENST00000628364 ABTB2Q8N961 1025 aa33.4■■■□□ 2.94
NRXN1-228ENST00000628364 CCDC30Q5VVM6 783 aa33.4■■■□□ 2.94
NRXN1-228ENST00000628364 G2E3Q7L622 706 aa33.39■■■□□ 2.94
NRXN1-228ENST00000628364 C16orf71Q8IYS4 520 aaPredicted RBP33.39■■■□□ 2.94
NRXN1-228ENST00000628364 BRPF3Q9ULD4 1205 aa33.39■■■□□ 2.94
NRXN1-228ENST00000628364 MARF1Q9Y4F3 1742 aaKnown RBP33.38■■■□□ 2.93
NRXN1-228ENST00000628364 CASC1Q6TDU7 716 aa33.38■■■□□ 2.93
NRXN1-228ENST00000628364 L1TD1Q5T7N2 865 aaKnown RBP33.37■■■□□ 2.93
NRXN1-228ENST00000628364 SLC4A10Q6U841 1118 aa33.37■■■□□ 2.93
NRXN1-228ENST00000628364 MAP3K5Q99683 1374 aa33.37■■■□□ 2.93
NRXN1-228ENST00000628364 DDX11L8A8MPP1 907 aa33.37■■■□□ 2.93
NRXN1-228ENST00000628364 K7ELQ4 463 aaPredicted RBP33.37■■■□□ 2.93
NRXN1-228ENST00000628364 NWD1Q149M9 1564 aa33.36■■■□□ 2.93
NRXN1-228ENST00000628364 GNAI2P04899 355 aa33.35■■■□□ 2.93
NRXN1-228ENST00000628364 F6X3S4 739 aa33.33■■■□□ 2.93
NRXN1-228ENST00000628364 NUTM2GQ5VZR2 741 aa33.33■■■□□ 2.93
NRXN1-228ENST00000628364 TAF7Q15545 349 aaPredicted RBP33.32■■■□□ 2.93
NRXN1-228ENST00000628364 GNAI3P08754 354 aa33.32■■■□□ 2.92
NRXN1-228ENST00000628364 FLIIQ13045 1269 aa33.32■■■□□ 2.92
NRXN1-228ENST00000628364 RABEP1Q15276 862 aa33.32■■■□□ 2.92
NRXN1-228ENST00000628364 PHF8Q9UPP1 1060 aa33.31■■■□□ 2.92
NRXN1-228ENST00000628364 HSP90AA1P07900 732 aaKnown RBP33.31■■■□□ 2.92
NRXN1-228ENST00000628364 SDSP20132 328 aa33.31■■■□□ 2.92
NRXN1-228ENST00000628364 OSBPL3Q9H4L5 887 aa33.31■■■□□ 2.92
NRXN1-228ENST00000628364 IL17REQ8NFR9 667 aa33.3■■■□□ 2.92
NRXN1-228ENST00000628364 OTUD7AQ8TE49 926 aaPredicted RBP33.3■■■□□ 2.92
NRXN1-228ENST00000628364 SMARCA5O60264 1052 aaPredicted RBP33.3■■■□□ 2.92
NRXN1-228ENST00000628364 TRAK2O60296 914 aa33.29■■■□□ 2.92
NRXN1-228ENST00000628364 USP26Q9BXU7 913 aa33.29■■■□□ 2.92
NRXN1-228ENST00000628364 FAM208AQ9UK61 1670 aaKnown RBP33.28■■■□□ 2.92
NRXN1-228ENST00000628364 FKBP5Q13451 457 aaPredicted RBP33.28■■■□□ 2.92
NRXN1-228ENST00000628364 RAB3GAP1Q15042 981 aa33.28■■■□□ 2.92
NRXN1-228ENST00000628364 ANKLE2Q86XL3 938 aa33.27■■■□□ 2.92
NRXN1-228ENST00000628364 GBP4Q96PP9 640 aa33.27■■■□□ 2.92
NRXN1-228ENST00000628364 APBB1O00213 710 aa33.27■■■□□ 2.92
NRXN1-228ENST00000628364 CD2BP2O95400 341 aaKnown RBP33.27■■■□□ 2.92
NRXN1-228ENST00000628364 CACNA1FO60840 1977 aa33.26■■■□□ 2.92
NRXN1-228ENST00000628364 PTMSP20962 102 aa33.26■■■□□ 2.91
NRXN1-228ENST00000628364 IP6K1Q92551 441 aa33.26■■■□□ 2.91
NRXN1-228ENST00000628364 LTV1Q96GA3 475 aaPredicted RBP33.26■■■□□ 2.91
NRXN1-228ENST00000628364 RBM42Q9BTD8 480 aaKnown RBP33.26■■■□□ 2.91
NRXN1-228ENST00000628364 TNPO1Q92973 898 aaKnown RBP33.24■■■□□ 2.91
NRXN1-228ENST00000628364 CHD2O14647 1828 aaKnown RBP33.24■■■□□ 2.91
NRXN1-228ENST00000628364 PXDNLA1KZ92 1463 aa33.24■■■□□ 2.91
NRXN1-228ENST00000628364 REC8O95072 547 aa33.24■■■□□ 2.91
NRXN1-228ENST00000628364 C14orf37Q86TY3 774 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms