RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 IFT57Q9NWB7 429 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 IL16Q14005 1332 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 SDSP20132 328 aa13.76□□□□□ -0.21
ZNF544-213ENST00000599227 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
ZNF544-213ENST00000599227 RBM25P49756 843 aaKnown RBP13.76□□□□□ -0.21
ZNF544-213ENST00000599227 KIF2CQ99661 725 aa13.75□□□□□ -0.21
ZNF544-213ENST00000599227 SURF6O75683 361 aaKnown RBP13.75□□□□□ -0.21
ZNF544-213ENST00000599227 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
ZNF544-213ENST00000599227 ZNF692Q9BU19 519 aaPredicted RBP13.75□□□□□ -0.21
ZNF544-213ENST00000599227 BAG4O95429 457 aaKnown RBP13.74□□□□□ -0.21
ZNF544-213ENST00000599227 SYTL4Q96C24 671 aaPredicted RBP13.74□□□□□ -0.21
ZNF544-213ENST00000599227 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
ZNF544-213ENST00000599227 GDPD2Q9HCC8 539 aa13.74□□□□□ -0.21
ZNF544-213ENST00000599227 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
ZNF544-213ENST00000599227 RAB3GAP1Q15042 981 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 SHPRHQ149N8 1683 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 ERBB4Q15303 1308 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 LTKP29376 864 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 INTS3Q68E01 1043 aaKnown RBP13.73□□□□□ -0.21
ZNF544-213ENST00000599227 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 GLI2P10070 1586 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 POGZQ7Z3K3 1410 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 FSD2A1L4K1 749 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 FGD1P98174 961 aa13.73□□□□□ -0.21
ZNF544-213ENST00000599227 HDGFL1Q5TGJ6 251 aa13.72□□□□□ -0.21
ZNF544-213ENST00000599227 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
ZNF544-213ENST00000599227 KIDINS220Q9ULH0 1771 aa13.72□□□□□ -0.21
ZNF544-213ENST00000599227 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
ZNF544-213ENST00000599227 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
ZNF544-213ENST00000599227 ST18O60284 1047 aa13.72□□□□□ -0.21
ZNF544-213ENST00000599227 TTC22Q5TAA0 569 aa13.72□□□□□ -0.21
ZNF544-213ENST00000599227 INO80Q9ULG1 1556 aaPredicted RBP13.72□□□□□ -0.21
ZNF544-213ENST00000599227 MSNP26038 577 aaKnown RBP13.72□□□□□ -0.21
ZNF544-213ENST00000599227 SNX21Q969T3 373 aa13.71□□□□□ -0.21
ZNF544-213ENST00000599227 PTMAP06454 111 aaKnown RBP13.71□□□□□ -0.22
ZNF544-213ENST00000599227 SLC39A6Q13433 755 aa13.71□□□□□ -0.22
ZNF544-213ENST00000599227 CHMP4CQ96CF2 233 aa13.7□□□□□ -0.22
ZNF544-213ENST00000599227 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
ZNF544-213ENST00000599227 AK9Q5TCS8 1911 aa13.7□□□□□ -0.22
ZNF544-213ENST00000599227 RBM10P98175 930 aaKnown RBP13.7□□□□□ -0.22
ZNF544-213ENST00000599227 CEP85Q6P2H3 762 aa13.7□□□□□ -0.22
ZNF544-213ENST00000599227 KCNA6P17658 529 aa13.7□□□□□ -0.22
ZNF544-213ENST00000599227 RABEP1Q15276 862 aa13.7□□□□□ -0.22
ZNF544-213ENST00000599227 MTHFSDQ2M296 383 aaKnown RBP13.7□□□□□ -0.22
ZNF544-213ENST00000599227 HSP90AA2PQ14568 343 aaPredicted RBP13.69□□□□□ -0.22
ZNF544-213ENST00000599227 SKOR2Q2VWA4 1001 aaPredicted RBP13.69□□□□□ -0.22
ZNF544-213ENST00000599227 DCTPP1Q9H773 170 aa13.69□□□□□ -0.22
ZNF544-213ENST00000599227 ABCC3O15438 1527 aa13.69□□□□□ -0.22
ZNF544-213ENST00000599227 SYCE3A1L190 88 aa13.69□□□□□ -0.22
ZNF544-213ENST00000599227 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
ZNF544-213ENST00000599227 FBXW7Q969H0 707 aa13.69□□□□□ -0.22
ZNF544-213ENST00000599227 MSH6P52701 1360 aa13.68□□□□□ -0.22
ZNF544-213ENST00000599227 VSIG10Q8N0Z9 540 aa13.68□□□□□ -0.22
ZNF544-213ENST00000599227 PUS7Q96PZ0 661 aaKnown RBP13.68□□□□□ -0.22
ZNF544-213ENST00000599227 USP26Q9BXU7 913 aa13.68□□□□□ -0.22
ZNF544-213ENST00000599227 VWDEQ8N2E2 1590 aa13.68□□□□□ -0.22
ZNF544-213ENST00000599227 NRXN1Q9ULB1 1477 aa13.68□□□□□ -0.22
ZNF544-213ENST00000599227 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
ZNF544-213ENST00000599227 HMMRO75330 724 aa13.68□□□□□ -0.22
ZNF544-213ENST00000599227 PROSER2Q86WR7 435 aaPredicted RBP13.68□□□□□ -0.22
ZNF544-213ENST00000599227 PHAXQ9H814 394 aaKnown RBP13.68□□□□□ -0.22
ZNF544-213ENST00000599227 CAMSAP1Q5T5Y3 1602 aa13.68□□□□□ -0.22
ZNF544-213ENST00000599227 SETD1BQ9UPS6 1966 aaKnown RBP13.67□□□□□ -0.22
ZNF544-213ENST00000599227 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 HSPA2P54652 639 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 C1orf141Q5JVX7 400 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 ANKRD44Q8N8A2 993 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 CIZ1Q9ULV3 898 aaPredicted RBP13.67□□□□□ -0.22
ZNF544-213ENST00000599227 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
ZNF544-213ENST00000599227 REC8O95072 547 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 ARHGAP45Q92619 1136 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 ABCC4O15439 1325 aa13.67□□□□□ -0.22
ZNF544-213ENST00000599227 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
ZNF544-213ENST00000599227 UBE2Q2Q8WVN8 375 aa13.66□□□□□ -0.22
ZNF544-213ENST00000599227 CLCN1P35523 988 aa13.66□□□□□ -0.22
ZNF544-213ENST00000599227 LRRC7Q96NW7 1537 aa13.66□□□□□ -0.22
ZNF544-213ENST00000599227 KCNQ3O43525 872 aa13.66□□□□□ -0.22
ZNF544-213ENST00000599227 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
ZNF544-213ENST00000599227 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
ZNF544-213ENST00000599227 TAF7Q15545 349 aaPredicted RBP13.66□□□□□ -0.22
ZNF544-213ENST00000599227 KIAA1211Q6ZU35 1233 aa13.66□□□□□ -0.22
ZNF544-213ENST00000599227 R3HCC1Q9Y3T6 440 aaKnown RBP13.66□□□□□ -0.22
ZNF544-213ENST00000599227 METP08581 1390 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 ERC2O15083 957 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 SRGAP3O43295 1099 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 DNTTIP2Q5QJE6 756 aaKnown RBP13.65□□□□□ -0.22
ZNF544-213ENST00000599227 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 EYA1Q99502 592 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 KIAA1210Q9ULL0 1709 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 NUCB2P80303 420 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 TTC21BQ7Z4L5 1316 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 RIMS2Q9UQ26 1411 aa13.65□□□□□ -0.22
ZNF544-213ENST00000599227 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.23
ZNF544-213ENST00000599227 PKNOX2Q96KN3 472 aa13.65□□□□□ -0.23
ZNF544-213ENST00000599227 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms