RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 PPLO60437 1756 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 METP08581 1390 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 SENP3-EIF4A1A0A087X0R7 540 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 CFAP69A5D8W1 941 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 SAFB2Q14151 953 aaKnown RBP eCLIP5.42□□□□□ -1.54
LRIT3-202ENST00000594814 PPP4R3BQ5MIZ7 849 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 NOL7Q9UMY1 257 aaKnown RBP5.42□□□□□ -1.54
LRIT3-202ENST00000594814 KIF3AQ9Y496 699 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 NCKAP5LQ9HCH0 1330 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 SETD1BQ9UPS6 1966 aaKnown RBP5.42□□□□□ -1.54
LRIT3-202ENST00000594814 ZFYVE9O95405 1425 aa5.42□□□□□ -1.54
LRIT3-202ENST00000594814 NRXN3Q9Y4C0 1643 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 CDCA7Q9BWT1 371 aaPredicted RBP5.41□□□□□ -1.54
LRIT3-202ENST00000594814 TRAK1Q9UPV9 953 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 GPRASP1Q5JY77 1395 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 PLEKHH1Q9ULM0 1364 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 ZC3H13Q5T200 1668 aaKnown RBP5.41□□□□□ -1.54
LRIT3-202ENST00000594814 PLEKHG3A1L390 1219 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 CTR9Q6PD62 1173 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 WAPLQ7Z5K2 1190 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 FAM9BQ8IZU0 186 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 GPATCH11Q8N954 259 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 C14orf93Q9H972 538 aaKnown RBP5.41□□□□□ -1.54
LRIT3-202ENST00000594814 STK26Q9P289 416 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 CLGNO14967 610 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 LARGE2Q8N3Y3 721 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 CEP120Q8N960 986 aa5.41□□□□□ -1.54
LRIT3-202ENST00000594814 SCAF11Q99590 1463 aaKnown RBP5.4□□□□□ -1.54
LRIT3-202ENST00000594814 ATAD2Q6PL18 1390 aa5.4□□□□□ -1.54
LRIT3-202ENST00000594814 DDX46Q7L014 1031 aaKnown RBP5.4□□□□□ -1.54
LRIT3-202ENST00000594814 KIF1BO60333 1816 aa5.4□□□□□ -1.54
LRIT3-202ENST00000594814 PARD3Q8TEW0 1356 aa5.4□□□□□ -1.54
LRIT3-202ENST00000594814 RIMS1Q86UR5 1692 aaKnown RBP5.4□□□□□ -1.55
LRIT3-202ENST00000594814 EXOC6Q8TAG9 804 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 SLC26A8Q96RN1 970 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 POGKQ9P215 609 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 C7P10643 843 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 ZSCAN20P17040 1043 aaPredicted RBP5.4□□□□□ -1.55
LRIT3-202ENST00000594814 ERCC3P19447 782 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 INHBEP58166 350 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 NLRP13Q86W25 1043 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 RETREG2Q8NC44 543 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 SNX21Q969T3 373 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 POLR3GLQ9BT43 218 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 NRBP1Q9UHY1 535 aa5.4□□□□□ -1.55
LRIT3-202ENST00000594814 UBR1Q8IWV7 1749 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 GOLGA6L22H0YM25 854 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 RIPK4P57078 832 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 SLKQ9H2G2 1235 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-202ENST00000594814 CCDC39Q9UFE4 941 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 RAD50Q92878 1312 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 TNRQ92752 1358 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 PTPRUQ92729 1446 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 TGFB3P10600 412 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 RGS3P49796 1198 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 ZNF622Q969S3 477 aaKnown RBP eCLIP5.39□□□□□ -1.55
LRIT3-202ENST00000594814 EFCC1Q9HA90 598 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 SETD1AO15047 1707 aaKnown RBP5.39□□□□□ -1.55
LRIT3-202ENST00000594814 MYOM2P54296 1465 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 MARCH6O60337 910 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 TPM3P06753 285 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 HSPA2P54652 639 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 ZNF445P59923 1031 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 SMC5Q8IY18 1101 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 PDLIM2Q96JY6 352 aa5.39□□□□□ -1.55
LRIT3-202ENST00000594814 GZF1Q9H116 711 aaPredicted RBP5.39□□□□□ -1.55
LRIT3-202ENST00000594814 KIF16BQ96L93 1317 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 PER1O15534 1290 aaPredicted RBP5.38□□□□□ -1.55
LRIT3-202ENST00000594814 TMCO4Q5TGY1 634 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 MYRIPQ8NFW9 859 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 TMC1Q8TDI8 760 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 TBC1D32Q96NH3 1257 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 CARD14Q9BXL6 1004 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 UBA5Q9GZZ9 404 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 IQGAP1P46940 1657 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 ADAMTS13Q76LX8 1427 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 RIMS2Q9UQ26 1411 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 ALKQ9UM73 1620 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 GYS2P54840 703 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 GIMAP6Q6P9H5 292 aa5.38□□□□□ -1.55
LRIT3-202ENST00000594814 GPBP1L1Q9HC44 474 aaPredicted RBP5.38□□□□□ -1.55
LRIT3-202ENST00000594814 TPD52L2O43399 206 aaKnown RBP5.37□□□□□ -1.55
LRIT3-202ENST00000594814 RHBDL3P58872 404 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 PDE3AQ14432 1141 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 UVSSAQ2YD98 709 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 C4orf46Q504U0 113 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 RBM46Q8TBY0 533 aaKnown RBP5.37□□□□□ -1.55
LRIT3-202ENST00000594814 IRF2BPLQ9H1B7 796 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 NPC1L1Q9UHC9 1359 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 TMEM2Q9UHN6 1383 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 NEURL4Q96JN8 1562 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 LRP5O75197 1615 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 SMARCA5O60264 1052 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-202ENST00000594814 GEMIN8Q9NWZ8 242 aaKnown RBP5.37□□□□□ -1.55
LRIT3-202ENST00000594814 DMRT2Q9Y5R5 561 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 HS6ST3Q8IZP7 471 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 HELBQ8NG08 1087 aaPredicted RBP5.37□□□□□ -1.55
LRIT3-202ENST00000594814 PMFBP1Q8TBY8 1022 aa5.37□□□□□ -1.55
LRIT3-202ENST00000594814 SNRNP27Q8WVK2 155 aaKnown RBP5.37□□□□□ -1.55
LRIT3-202ENST00000594814 CALCOCO1Q9P1Z2 691 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms