RNA–Protein interactions for RNA: ENST00000592385.5

HDAC5-211, Transcript of histone deacetylase 5, humanhuman

TSL 5

Gene HDAC5, Length 2,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-211ENST00000592385 ATP10DQ9P241 1426 aa19.05■□□□□ 0.64
HDAC5-211ENST00000592385 KDRP35968 1356 aa19.05■□□□□ 0.64
HDAC5-211ENST00000592385 TBC1D9Q6ZT07 1266 aa19.04■□□□□ 0.64
HDAC5-211ENST00000592385 RPAP2Q8IXW5 612 aaPredicted RBP19.04■□□□□ 0.64
HDAC5-211ENST00000592385 ANKRD44Q8N8A2 993 aa19.04■□□□□ 0.64
HDAC5-211ENST00000592385 MAP3K19Q56UN5 1328 aa19.04■□□□□ 0.64
HDAC5-211ENST00000592385 MCM4P33991 863 aa19.04■□□□□ 0.64
HDAC5-211ENST00000592385 SPRYD3Q8NCJ5 442 aa19.04■□□□□ 0.64
HDAC5-211ENST00000592385 BRPF3Q9ULD4 1205 aa19.04■□□□□ 0.64
HDAC5-211ENST00000592385 KRT24Q2M2I5 525 aa19.03■□□□□ 0.64
HDAC5-211ENST00000592385 CDC45O75419 566 aa19.03■□□□□ 0.64
HDAC5-211ENST00000592385 RGPD8O14715 1765 aaPredicted RBP19.03■□□□□ 0.64
HDAC5-211ENST00000592385 DDIT3P35638 169 aa19.02■□□□□ 0.64
HDAC5-211ENST00000592385 KIF2CQ99661 725 aa19.02■□□□□ 0.63
HDAC5-211ENST00000592385 PLEKHM2Q8IWE5 1019 aa19.01■□□□□ 0.63
HDAC5-211ENST00000592385 PIK3C2AO00443 1686 aa19.01■□□□□ 0.63
HDAC5-211ENST00000592385 XRN1Q8IZH2 1706 aaKnown RBP19.01■□□□□ 0.63
HDAC5-211ENST00000592385 RTL1A6NKG5 1358 aa19■□□□□ 0.63
HDAC5-211ENST00000592385 CEBPAP49715 358 aaPredicted RBP19■□□□□ 0.63
HDAC5-211ENST00000592385 CIZ1Q9ULV3 898 aaPredicted RBP19■□□□□ 0.63
HDAC5-211ENST00000592385 IGSF1Q8N6C5 1336 aa19■□□□□ 0.63
HDAC5-211ENST00000592385 MSH6P52701 1360 aa19■□□□□ 0.63
HDAC5-211ENST00000592385 CEP85Q6P2H3 762 aa19■□□□□ 0.63
HDAC5-211ENST00000592385 RTF1Q92541 710 aaKnown RBP19■□□□□ 0.63
HDAC5-211ENST00000592385 MTHFSDQ2M296 383 aaKnown RBP18.99■□□□□ 0.63
HDAC5-211ENST00000592385 NGDNQ8NEJ9 315 aaKnown RBP18.99■□□□□ 0.63
HDAC5-211ENST00000592385 ANKARQ7Z5J8 1434 aa18.99■□□□□ 0.63
HDAC5-211ENST00000592385 GSPT1P15170 499 aaKnown RBP18.99■□□□□ 0.63
HDAC5-211ENST00000592385 GAS2L2Q8NHY3 880 aa18.99■□□□□ 0.63
HDAC5-211ENST00000592385 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
HDAC5-211ENST00000592385 SOX12O15370 315 aa18.98■□□□□ 0.63
HDAC5-211ENST00000592385 L1TD1Q5T7N2 865 aaKnown RBP18.98■□□□□ 0.63
HDAC5-211ENST00000592385 TTC22Q5TAA0 569 aa18.98■□□□□ 0.63
HDAC5-211ENST00000592385 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
HDAC5-211ENST00000592385 HTATSF1O43719 755 aaKnown RBP18.97■□□□□ 0.63
HDAC5-211ENST00000592385 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
HDAC5-211ENST00000592385 LRRC37A3O60309 1634 aa18.97■□□□□ 0.63
HDAC5-211ENST00000592385 SLC4A2P04920 1241 aa18.97■□□□□ 0.63
HDAC5-211ENST00000592385 TSPYL4Q9UJ04 414 aa18.97■□□□□ 0.63
HDAC5-211ENST00000592385 CEP170BQ9Y4F5 1589 aaPredicted RBP18.96■□□□□ 0.63
HDAC5-211ENST00000592385 HSP90AB1P08238 724 aaKnown RBP18.96■□□□□ 0.63
HDAC5-211ENST00000592385 AMPHP49418 695 aa18.96■□□□□ 0.63
HDAC5-211ENST00000592385 DDX11L8A8MPP1 907 aa18.96■□□□□ 0.63
HDAC5-211ENST00000592385 EYA1Q99502 592 aa18.96■□□□□ 0.63
HDAC5-211ENST00000592385 FOXO3O43524 673 aa18.95■□□□□ 0.62
HDAC5-211ENST00000592385 MEIS3Q99687 375 aa18.95■□□□□ 0.62
HDAC5-211ENST00000592385 CCT4P50991 539 aaKnown RBP18.94■□□□□ 0.62
HDAC5-211ENST00000592385 CACNA1FO60840 1977 aa18.94■□□□□ 0.62
HDAC5-211ENST00000592385 MARF1Q9Y4F3 1742 aaKnown RBP18.94■□□□□ 0.62
HDAC5-211ENST00000592385 K7ELQ4 463 aaPredicted RBP18.93■□□□□ 0.62
HDAC5-211ENST00000592385 HMMRO75330 724 aa18.93■□□□□ 0.62
HDAC5-211ENST00000592385 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
HDAC5-211ENST00000592385 SOS1Q07889 1333 aaPredicted RBP18.92■□□□□ 0.62
HDAC5-211ENST00000592385 TRAK2O60296 914 aa18.91■□□□□ 0.62
HDAC5-211ENST00000592385 NLRP6P59044 892 aa18.91■□□□□ 0.62
HDAC5-211ENST00000592385 C16orf71Q8IYS4 520 aaPredicted RBP18.91■□□□□ 0.62
HDAC5-211ENST00000592385 FAM208AQ9UK61 1670 aaKnown RBP18.91■□□□□ 0.62
HDAC5-211ENST00000592385 NWD1Q149M9 1564 aa18.9■□□□□ 0.62
HDAC5-211ENST00000592385 RAB3GAP1Q15042 981 aa18.9■□□□□ 0.62
HDAC5-211ENST00000592385 CD2BP2O95400 341 aaKnown RBP18.9■□□□□ 0.62
HDAC5-211ENST00000592385 G2E3Q7L622 706 aa18.9■□□□□ 0.62
HDAC5-211ENST00000592385 STK31Q9BXU1 1019 aa18.9■□□□□ 0.62
HDAC5-211ENST00000592385 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
HDAC5-211ENST00000592385 FSD2A1L4K1 749 aa18.89■□□□□ 0.62
HDAC5-211ENST00000592385 HOXC9P31274 260 aa18.89■□□□□ 0.62
HDAC5-211ENST00000592385 RABEP1Q15276 862 aa18.89■□□□□ 0.62
HDAC5-211ENST00000592385 BABAM1Q9NWV8 329 aa18.89■□□□□ 0.62
HDAC5-211ENST00000592385 GNAT3A8MTJ3 354 aa18.89■□□□□ 0.61
HDAC5-211ENST00000592385 CASC1Q6TDU7 716 aa18.89■□□□□ 0.61
HDAC5-211ENST00000592385 GBP4Q96PP9 640 aa18.89■□□□□ 0.61
HDAC5-211ENST00000592385 N4BP2Q86UW6 1770 aaPredicted RBP18.89■□□□□ 0.61
HDAC5-211ENST00000592385 TNPO1Q92973 898 aaKnown RBP18.88■□□□□ 0.61
HDAC5-211ENST00000592385 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
HDAC5-211ENST00000592385 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
HDAC5-211ENST00000592385 USP26Q9BXU7 913 aa18.88■□□□□ 0.61
HDAC5-211ENST00000592385 SDSP20132 328 aa18.87■□□□□ 0.61
HDAC5-211ENST00000592385 PTMSP20962 102 aa18.87■□□□□ 0.61
HDAC5-211ENST00000592385 CCDC30Q5VVM6 783 aa18.87■□□□□ 0.61
HDAC5-211ENST00000592385 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
HDAC5-211ENST00000592385 GOLGA6L3A6NEY3 463 aa18.87■□□□□ 0.61
HDAC5-211ENST00000592385 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
HDAC5-211ENST00000592385 GNAI2P04899 355 aa18.87■□□□□ 0.61
HDAC5-211ENST00000592385 SLC4A10Q6U841 1118 aa18.87■□□□□ 0.61
HDAC5-211ENST00000592385 MAP3K5Q99683 1374 aa18.86■□□□□ 0.61
HDAC5-211ENST00000592385 F6X3S4 739 aa18.86■□□□□ 0.61
HDAC5-211ENST00000592385 SMARCA5O60264 1052 aaPredicted RBP18.86■□□□□ 0.61
HDAC5-211ENST00000592385 KCNA6P17658 529 aa18.86■□□□□ 0.61
HDAC5-211ENST00000592385 GNAI3P08754 354 aa18.85■□□□□ 0.61
HDAC5-211ENST00000592385 FLIIQ13045 1269 aa18.85■□□□□ 0.61
HDAC5-211ENST00000592385 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
HDAC5-211ENST00000592385 PXDNLA1KZ92 1463 aa18.84■□□□□ 0.61
HDAC5-211ENST00000592385 REC8O95072 547 aa18.83■□□□□ 0.61
HDAC5-211ENST00000592385 FAM43AQ8N2R8 423 aa18.83■□□□□ 0.61
HDAC5-211ENST00000592385 ABTB2Q8N961 1025 aa18.83■□□□□ 0.61
HDAC5-211ENST00000592385 APBB1O00213 710 aa18.83■□□□□ 0.6
HDAC5-211ENST00000592385 TAF7Q15545 349 aaPredicted RBP18.82■□□□□ 0.6
HDAC5-211ENST00000592385 SKOR2Q2VWA4 1001 aaPredicted RBP18.82■□□□□ 0.6
HDAC5-211ENST00000592385 CLEC17AQ6ZS10 378 aa18.82■□□□□ 0.6
HDAC5-211ENST00000592385 GZF1Q9H116 711 aaPredicted RBP18.82■□□□□ 0.6
HDAC5-211ENST00000592385 LTN1O94822 1766 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms