RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
XRCC3-209ENST00000554913 SDSP20132 328 aa20.48■□□□□ 0.87
XRCC3-209ENST00000554913 CPS1P31327 1500 aa20.47■□□□□ 0.87
XRCC3-209ENST00000554913 NASPP49321 788 aaPredicted RBP20.47■□□□□ 0.87
XRCC3-209ENST00000554913 NUDT16Q96DE0 195 aaKnown RBP20.47■□□□□ 0.87
XRCC3-209ENST00000554913 RGS12O14924 1447 aa20.47■□□□□ 0.87
XRCC3-209ENST00000554913 TXNDC2Q86VQ3 553 aa20.46■□□□□ 0.87
XRCC3-209ENST00000554913 RPAP2Q8IXW5 612 aaPredicted RBP20.46■□□□□ 0.87
XRCC3-209ENST00000554913 CYP2E1P05181 493 aaPredicted RBP20.45■□□□□ 0.86
XRCC3-209ENST00000554913 NUCB2P80303 420 aa20.45■□□□□ 0.86
XRCC3-209ENST00000554913 SULT6B1Q6IMI4 303 aa20.45■□□□□ 0.86
XRCC3-209ENST00000554913 MCM10Q7L590 875 aa20.45■□□□□ 0.86
XRCC3-209ENST00000554913 MEIS3Q99687 375 aa20.45■□□□□ 0.86
XRCC3-209ENST00000554913 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
XRCC3-209ENST00000554913 A2ML1A8K2U0 1454 aa20.44■□□□□ 0.86
XRCC3-209ENST00000554913 MSH6P52701 1360 aa20.44■□□□□ 0.86
XRCC3-209ENST00000554913 CCDC173Q0VFZ6 552 aa20.44■□□□□ 0.86
XRCC3-209ENST00000554913 NCLP19338 710 aaKnown RBP20.44■□□□□ 0.86
XRCC3-209ENST00000554913 ZGPATQ8N5A5 531 aaKnown RBP20.44■□□□□ 0.86
XRCC3-209ENST00000554913 PPP1R9BQ96SB3 815 aa20.44■□□□□ 0.86
XRCC3-209ENST00000554913 RTL1A6NKG5 1358 aa20.43■□□□□ 0.86
XRCC3-209ENST00000554913 LMBRD1Q9NUN5 540 aa20.43■□□□□ 0.86
XRCC3-209ENST00000554913 CCDC61Q9Y6R9 512 aa20.43■□□□□ 0.86
XRCC3-209ENST00000554913 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
XRCC3-209ENST00000554913 CHL1O00533 1208 aa20.43■□□□□ 0.86
XRCC3-209ENST00000554913 CAVIN1Q6NZI2 390 aaKnown RBP20.43■□□□□ 0.86
XRCC3-209ENST00000554913 EIF4A2Q14240 407 aaKnown RBP20.42■□□□□ 0.86
XRCC3-209ENST00000554913 METP08581 1390 aa20.42■□□□□ 0.86
XRCC3-209ENST00000554913 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
XRCC3-209ENST00000554913 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
XRCC3-209ENST00000554913 CASC1Q6TDU7 716 aa20.4■□□□□ 0.86
XRCC3-209ENST00000554913 ZNF445P59923 1031 aa20.4■□□□□ 0.86
XRCC3-209ENST00000554913 ZSCAN23Q3MJ62 389 aa20.4■□□□□ 0.86
XRCC3-209ENST00000554913 ST18O60284 1047 aa20.39■□□□□ 0.85
XRCC3-209ENST00000554913 ANP32BQ92688 251 aaKnown RBP20.38■□□□□ 0.85
XRCC3-209ENST00000554913 CHAMP1Q96JM3 812 aa20.38■□□□□ 0.85
XRCC3-209ENST00000554913 CWC22Q9HCG8 908 aaKnown RBP20.38■□□□□ 0.85
XRCC3-209ENST00000554913 ZDHHC9Q9Y397 364 aa20.38■□□□□ 0.85
XRCC3-209ENST00000554913 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
XRCC3-209ENST00000554913 MIS18AQ9NYP9 233 aa20.38■□□□□ 0.85
XRCC3-209ENST00000554913 PRPF40AO75400 957 aaKnown RBP20.37■□□□□ 0.85
XRCC3-209ENST00000554913 HAP1P54257 671 aaPredicted RBP20.37■□□□□ 0.85
XRCC3-209ENST00000554913 PTPRCP08575 1304 aa20.37■□□□□ 0.85
XRCC3-209ENST00000554913 REC8O95072 547 aa20.37■□□□□ 0.85
XRCC3-209ENST00000554913 PRR36Q9H6K5 1346 aa20.37■□□□□ 0.85
XRCC3-209ENST00000554913 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
XRCC3-209ENST00000554913 ERC2O15083 957 aa20.36■□□□□ 0.85
XRCC3-209ENST00000554913 ZSCAN30Q86W11 494 aa20.36■□□□□ 0.85
XRCC3-209ENST00000554913 HSP90AA2PQ14568 343 aaPredicted RBP20.35■□□□□ 0.85
XRCC3-209ENST00000554913 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
XRCC3-209ENST00000554913 RBSNQ9H1K0 784 aa20.35■□□□□ 0.85
XRCC3-209ENST00000554913 RBM27Q9P2N5 1060 aaKnown RBP20.35■□□□□ 0.85
XRCC3-209ENST00000554913 F6X3S4 739 aa20.35■□□□□ 0.85
XRCC3-209ENST00000554913 SLC4A10Q6U841 1118 aa20.35■□□□□ 0.85
XRCC3-209ENST00000554913 G2E3Q7L622 706 aa20.35■□□□□ 0.85
XRCC3-209ENST00000554913 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
XRCC3-209ENST00000554913 MON2Q7Z3U7 1717 aa20.34■□□□□ 0.85
XRCC3-209ENST00000554913 PRIM1P49642 420 aaKnown RBP20.34■□□□□ 0.85
XRCC3-209ENST00000554913 PDE1AP54750 535 aa20.33■□□□□ 0.85
XRCC3-209ENST00000554913 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.84
XRCC3-209ENST00000554913 TSHZ3Q63HK5 1081 aa20.33■□□□□ 0.84
XRCC3-209ENST00000554913 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.84
XRCC3-209ENST00000554913 C3P01024 1663 aa20.33■□□□□ 0.84
XRCC3-209ENST00000554913 NRXN3Q9Y4C0 1643 aa20.32■□□□□ 0.84
XRCC3-209ENST00000554913 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
XRCC3-209ENST00000554913 HMMRO75330 724 aa20.32■□□□□ 0.84
XRCC3-209ENST00000554913 SOX12O15370 315 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 FOXO3O43524 673 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 RRP9O43818 475 aaKnown RBP20.31■□□□□ 0.84
XRCC3-209ENST00000554913 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.31■□□□□ 0.84
XRCC3-209ENST00000554913 NEK4P51957 841 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 OSBPL3Q9H4L5 887 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 EXOC6BQ9Y2D4 811 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 CRB1P82279 1406 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 NRKQ7Z2Y5 1582 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 TTC21BQ7Z4L5 1316 aa20.31■□□□□ 0.84
XRCC3-209ENST00000554913 NUTM2FA1L443 756 aa20.3■□□□□ 0.84
XRCC3-209ENST00000554913 NSFL1CQ9UNZ2 370 aaKnown RBP20.3■□□□□ 0.84
XRCC3-209ENST00000554913 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
XRCC3-209ENST00000554913 MSNP26038 577 aaKnown RBP20.29■□□□□ 0.84
XRCC3-209ENST00000554913 CEBPAP49715 358 aaPredicted RBP20.29■□□□□ 0.84
XRCC3-209ENST00000554913 TMX3Q96JJ7 454 aa20.29■□□□□ 0.84
XRCC3-209ENST00000554913 TMEM63CQ9P1W3 806 aa20.29■□□□□ 0.84
XRCC3-209ENST00000554913 AKAP12Q02952 1782 aa20.29■□□□□ 0.84
XRCC3-209ENST00000554913 TSPYL4Q9UJ04 414 aa20.28■□□□□ 0.84
XRCC3-209ENST00000554913 ACEP12821 1306 aa20.27■□□□□ 0.84
XRCC3-209ENST00000554913 TPM2P07951 284 aa20.27■□□□□ 0.84
XRCC3-209ENST00000554913 CCT4P50991 539 aaKnown RBP20.27■□□□□ 0.84
XRCC3-209ENST00000554913 ITSN1Q15811 1721 aa20.27■□□□□ 0.83
XRCC3-209ENST00000554913 OFD1O75665 1012 aa20.26■□□□□ 0.83
XRCC3-209ENST00000554913 SIRT1Q96EB6 747 aa20.26■□□□□ 0.83
XRCC3-209ENST00000554913 PDLIM2Q96JY6 352 aa20.26■□□□□ 0.83
XRCC3-209ENST00000554913 PALD1Q9ULE6 856 aa20.26■□□□□ 0.83
XRCC3-209ENST00000554913 SYCE3A1L190 88 aa20.26■□□□□ 0.83
XRCC3-209ENST00000554913 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
XRCC3-209ENST00000554913 ESYT1Q9BSJ8 1104 aa20.26■□□□□ 0.83
XRCC3-209ENST00000554913 GNAI2P04899 355 aa20.25■□□□□ 0.83
XRCC3-209ENST00000554913 MAP3K19Q56UN5 1328 aa20.25■□□□□ 0.83
XRCC3-209ENST00000554913 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
XRCC3-209ENST00000554913 NOL8Q76FK4 1167 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms