RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 PRIMPOLQ96LW4 560 aa9.67□□□□□ -0.86
TGFBR1-208ENST00000550253 PRDM9Q9NQV7 894 aa9.67□□□□□ -0.86
TGFBR1-208ENST00000550253 BCAMP50895 628 aa9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 GTF2IP78347 998 aa9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 CCDC102BQ68D86 513 aa9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 DZIP3Q86Y13 1208 aaKnown RBP9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 ICMTO60725 284 aa9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 GIGYF1O75420 1035 aaPredicted RBP9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 SH3RF1Q7Z6J0 888 aa9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 PCDHGA11Q9Y5H2 935 aa9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 TARBP1Q13395 1621 aaKnown RBP9.66□□□□□ -0.86
TGFBR1-208ENST00000550253 EMP3P54852 163 aa9.65□□□□□ -0.86
TGFBR1-208ENST00000550253 ECM1Q16610 540 aa9.65□□□□□ -0.86
TGFBR1-208ENST00000550253 OXLD1Q5BKU9 147 aa9.65□□□□□ -0.86
TGFBR1-208ENST00000550253 PTCRAQ6ISU1 281 aaPredicted RBP9.65□□□□□ -0.86
TGFBR1-208ENST00000550253 OTUD5Q96G74 571 aa9.65□□□□□ -0.86
TGFBR1-208ENST00000550253 SFI1A8K8P3 1242 aa9.64□□□□□ -0.87
TGFBR1-208ENST00000550253 ABL1P00519 1130 aa9.64□□□□□ -0.87
TGFBR1-208ENST00000550253 ZNF211Q13398 564 aaPredicted RBP9.64□□□□□ -0.87
TGFBR1-208ENST00000550253 H3BRB1 525 aa9.63□□□□□ -0.87
TGFBR1-208ENST00000550253 TPCN2Q8NHX9 752 aa9.63□□□□□ -0.87
TGFBR1-208ENST00000550253 TUT1Q9H6E5 874 aaKnown RBP9.63□□□□□ -0.87
TGFBR1-208ENST00000550253 ANO2Q9NQ90 1003 aa9.63□□□□□ -0.87
TGFBR1-208ENST00000550253 DNMBPQ6XZF7 1577 aa9.63□□□□□ -0.87
TGFBR1-208ENST00000550253 ST18O60284 1047 aa9.62□□□□□ -0.87
TGFBR1-208ENST00000550253 VAMP1P23763 118 aa9.62□□□□□ -0.87
TGFBR1-208ENST00000550253 ZNF326Q5BKZ1 582 aaKnown RBP9.62□□□□□ -0.87
TGFBR1-208ENST00000550253 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
TGFBR1-208ENST00000550253 AQRO60306 1485 aaKnown RBP eCLIP9.62□□□□□ -0.87
TGFBR1-208ENST00000550253 ARAP1Q96P48 1450 aa9.62□□□□□ -0.87
TGFBR1-208ENST00000550253 FAM205CA6NFA0 338 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 TCF3P15923 654 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 LSM11P83369 360 aaKnown RBP eCLIP9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 MARVELD3Q96A59 401 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 CARD14Q9BXL6 1004 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 RBM19Q9Y4C8 960 aaKnown RBP9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 GOLGA8CPA6NN73 597 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 C21orf2O43822 256 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 RNF20Q5VTR2 975 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 GLYCTKQ8IVS8 523 aa9.61□□□□□ -0.87
TGFBR1-208ENST00000550253 MAGEB6P1A0A0J9YX57 407 aa9.6□□□□□ -0.87
TGFBR1-208ENST00000550253 ERFEQ4G0M1 354 aa9.6□□□□□ -0.87
TGFBR1-208ENST00000550253 CYB5RLQ6IPT4 315 aa9.6□□□□□ -0.87
TGFBR1-208ENST00000550253 GTF3C2Q8WUA4 911 aaPredicted RBP9.6□□□□□ -0.87
TGFBR1-208ENST00000550253 ASB16Q96NS5 453 aa9.6□□□□□ -0.87
TGFBR1-208ENST00000550253 SEPT3Q9UH03 358 aa9.6□□□□□ -0.87
TGFBR1-208ENST00000550253 POTEB3A0JP26 581 aa9.59□□□□□ -0.87
TGFBR1-208ENST00000550253 WEE1P30291 646 aa9.59□□□□□ -0.87
TGFBR1-208ENST00000550253 TAGLNQ01995 201 aaKnown RBP9.59□□□□□ -0.87
TGFBR1-208ENST00000550253 POTEBQ6S5H4 581 aa9.59□□□□□ -0.87
TGFBR1-208ENST00000550253 WBP1LQ9NX94 342 aa9.59□□□□□ -0.87
TGFBR1-208ENST00000550253 DNMT3AQ9Y6K1 912 aaPredicted RBP9.59□□□□□ -0.87
TGFBR1-208ENST00000550253 LGR5O75473 907 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 MAPK1P28482 360 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 COPS2P61201 443 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 ARHGAP4P98171 946 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 USP4Q13107 963 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 WNT2BQ93097 391 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 DCTN4Q9UJW0 460 aa9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 POLA1P09884 1462 aaPredicted RBP9.58□□□□□ -0.88
TGFBR1-208ENST00000550253 ESPNB1AK53 854 aa9.57□□□□□ -0.88
TGFBR1-208ENST00000550253 FKBP4Q02790 459 aaKnown RBP eCLIP9.57□□□□□ -0.88
TGFBR1-208ENST00000550253 PSME1Q06323 249 aa9.57□□□□□ -0.88
TGFBR1-208ENST00000550253 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
TGFBR1-208ENST00000550253 CAPN12Q6ZSI9 719 aa9.57□□□□□ -0.88
TGFBR1-208ENST00000550253 HINFPQ9BQA5 517 aa9.57□□□□□ -0.88
TGFBR1-208ENST00000550253 ABCC8Q09428 1581 aa9.57□□□□□ -0.88
TGFBR1-208ENST00000550253 M0R2N6 131 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 ADH1BP00325 375 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 BPHLQ86WA6 291 aaPredicted RBP9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 BAP1Q92560 729 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 FOXJ1Q92949 421 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 RAD54L2Q9Y4B4 1467 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 TLL1O43897 1013 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 SF3B2Q13435 895 aaKnown RBP9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 FKBP5Q13451 457 aaPredicted RBP9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 HS3ST6Q96QI5 342 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 MKNK1Q9BUB5 465 aa9.56□□□□□ -0.88
TGFBR1-208ENST00000550253 MTMR3Q13615 1198 aa9.55□□□□□ -0.88
TGFBR1-208ENST00000550253 COL19A1Q14993 1142 aa9.55□□□□□ -0.88
TGFBR1-208ENST00000550253 TSEN2Q8NCE0 465 aaKnown RBP9.55□□□□□ -0.88
TGFBR1-208ENST00000550253 STAC3Q96MF2 364 aa9.55□□□□□ -0.88
TGFBR1-208ENST00000550253 PURBQ96QR8 312 aaKnown RBP9.55□□□□□ -0.88
TGFBR1-208ENST00000550253 PCDHB11Q9Y5F2 797 aa9.55□□□□□ -0.88
TGFBR1-208ENST00000550253 ZPR1O75312 459 aa9.54□□□□□ -0.88
TGFBR1-208ENST00000550253 C1QTNF2Q9BXJ5 285 aa9.54□□□□□ -0.88
TGFBR1-208ENST00000550253 CLASP1Q7Z460 1538 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 PTCD1O75127 700 aaKnown RBP9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 RECKO95980 971 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 NBPF20Q3BBV1 942 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 CCDC125Q86Z20 511 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 ZSCAN29Q8IWY8 852 aaPredicted RBP9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 ZNF511Q8NB15 262 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 COL26A1Q96A83 441 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 SLC10A4Q96EP9 437 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 PCDH10Q9P2E7 1040 aa9.53□□□□□ -0.88
TGFBR1-208ENST00000550253 AGERQ15109 404 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms