RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 FMN2Q9NZ56 1722 aa6.48□□□□□ -1.37
PROM1-220ENST00000540805 ZBTB9Q96C00 473 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 RUNDC1Q96C34 613 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 CIZ1Q9ULV3 898 aaPredicted RBP6.47□□□□□ -1.37
PROM1-220ENST00000540805 PIK3C2AO00443 1686 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 AMPHP49418 695 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 RRP7AQ9Y3A4 280 aaKnown RBP6.47□□□□□ -1.37
PROM1-220ENST00000540805 MINK1Q8N4C8 1332 aaPredicted RBP6.47□□□□□ -1.37
PROM1-220ENST00000540805 NCKAP5LQ9HCH0 1330 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 LRRC7Q96NW7 1537 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 ELL2O00472 640 aaPredicted RBP6.47□□□□□ -1.37
PROM1-220ENST00000540805 HSP90AB1P08238 724 aaKnown RBP6.47□□□□□ -1.37
PROM1-220ENST00000540805 CBX1P83916 185 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 CCDC173Q0VFZ6 552 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 WDR63Q8IWG1 891 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 TNPO1Q92973 898 aaKnown RBP6.47□□□□□ -1.37
PROM1-220ENST00000540805 PTCH1Q13635 1447 aa6.47□□□□□ -1.37
PROM1-220ENST00000540805 NCLP19338 710 aaKnown RBP6.46□□□□□ -1.37
PROM1-220ENST00000540805 TMEM51Q9NW97 253 aa6.46□□□□□ -1.37
PROM1-220ENST00000540805 ZKSCAN2Q63HK3 967 aa6.46□□□□□ -1.38
PROM1-220ENST00000540805 SNX21Q969T3 373 aa6.46□□□□□ -1.38
PROM1-220ENST00000540805 CHMP3Q9Y3E7 222 aa6.46□□□□□ -1.38
PROM1-220ENST00000540805 DDIT3P35638 169 aa6.46□□□□□ -1.38
PROM1-220ENST00000540805 SMC5Q8IY18 1101 aa6.46□□□□□ -1.38
PROM1-220ENST00000540805 DZIP1LQ8IYY4 767 aaKnown RBP6.46□□□□□ -1.38
PROM1-220ENST00000540805 TCP11L2Q8N4U5 519 aa6.46□□□□□ -1.38
PROM1-220ENST00000540805 SYTL4Q96C24 671 aaPredicted RBP6.46□□□□□ -1.38
PROM1-220ENST00000540805 PPIP5K1Q6PFW1 1433 aa6.46□□□□□ -1.38
PROM1-220ENST00000540805 MTHFSP49914 203 aa6.45□□□□□ -1.38
PROM1-220ENST00000540805 RAB3GAP1Q15042 981 aa6.45□□□□□ -1.38
PROM1-220ENST00000540805 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.45□□□□□ -1.38
PROM1-220ENST00000540805 CABP1Q9NZU7 370 aa6.45□□□□□ -1.38
PROM1-220ENST00000540805 EDC4Q6P2E9 1401 aaKnown RBP6.45□□□□□ -1.38
PROM1-220ENST00000540805 GOLGA6L22H0YM25 854 aa6.45□□□□□ -1.38
PROM1-220ENST00000540805 ZSCAN20P17040 1043 aaPredicted RBP6.45□□□□□ -1.38
PROM1-220ENST00000540805 MSNP26038 577 aaKnown RBP6.45□□□□□ -1.38
PROM1-220ENST00000540805 RBM25P49756 843 aaKnown RBP6.45□□□□□ -1.38
PROM1-220ENST00000540805 ZSCAN30Q86W11 494 aa6.45□□□□□ -1.38
PROM1-220ENST00000540805 UQCRHLA0A096LP55 91 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 WASLO00401 505 aaPredicted RBP6.44□□□□□ -1.38
PROM1-220ENST00000540805 UQCRHP07919 91 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 NASPP49321 788 aaPredicted RBP6.44□□□□□ -1.38
PROM1-220ENST00000540805 EVA1CP58658 441 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 HDAC1Q13547 482 aaPredicted RBP6.44□□□□□ -1.38
PROM1-220ENST00000540805 PPP4R3BQ5MIZ7 849 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 NUTM2GQ5VZR2 741 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 OVOS2A0A0J9YW53 1432 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 OVOS2Q6IE36 1432 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 SPDYE4A6NLX3 237 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 CDK11BP21127 795 aaKnown RBP6.44□□□□□ -1.38
PROM1-220ENST00000540805 CCDC27Q2M243 656 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 SLC4A10Q6U841 1118 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 TXNDC2Q86VQ3 553 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.44□□□□□ -1.38
PROM1-220ENST00000540805 PPP1R9BQ96SB3 815 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 STRCP1A6NGW2 1772 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 OFD1O75665 1012 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 FBLN1P23142 703 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 DDX19BQ9UMR2 479 aa6.44□□□□□ -1.38
PROM1-220ENST00000540805 ITPRIPQ8IWB1 547 aa6.43□□□□□ -1.38
PROM1-220ENST00000540805 GGNBP2Q9H3C7 697 aa6.43□□□□□ -1.38
PROM1-220ENST00000540805 CDK12Q9NYV4 1490 aaPredicted RBP6.43□□□□□ -1.38
PROM1-220ENST00000540805 CT47B1P0C2W7 299 aaPredicted RBP6.43□□□□□ -1.38
PROM1-220ENST00000540805 SMC4Q9NTJ3 1288 aa6.43□□□□□ -1.38
PROM1-220ENST00000540805 ZRANB1Q9UGI0 708 aa6.43□□□□□ -1.38
PROM1-220ENST00000540805 NWD1Q149M9 1564 aa6.43□□□□□ -1.38
PROM1-220ENST00000540805 TERF1P54274 439 aa6.43□□□□□ -1.38
PROM1-220ENST00000540805 HSPA2P54652 639 aa6.43□□□□□ -1.38
PROM1-220ENST00000540805 CHMP4CQ96CF2 233 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 MAP7D2Q96T17 732 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 POLKQ9UBT6 870 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 TRIM35Q9UPQ4 493 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 AATKQ6ZMQ8 1374 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 IBTKQ9P2D0 1353 aaPredicted RBP6.42□□□□□ -1.38
PROM1-220ENST00000540805 K7ELQ4 463 aaPredicted RBP6.42□□□□□ -1.38
PROM1-220ENST00000540805 PLCB2Q00722 1185 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 ATP2B3Q16720 1220 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 DHX37Q8IY37 1157 aaKnown RBP6.42□□□□□ -1.38
PROM1-220ENST00000540805 TERF2IPQ9NYB0 399 aa6.42□□□□□ -1.38
PROM1-220ENST00000540805 DDX49Q9Y6V7 483 aaKnown RBP6.42□□□□□ -1.38
PROM1-220ENST00000540805 PHRF1Q9P1Y6 1649 aaKnown RBP6.41□□□□□ -1.38
PROM1-220ENST00000540805 TRIM27P14373 513 aa6.41□□□□□ -1.38
PROM1-220ENST00000540805 KLHL40Q2TBA0 621 aa6.41□□□□□ -1.38
PROM1-220ENST00000540805 USP6P35125 1406 aa6.41□□□□□ -1.38
PROM1-220ENST00000540805 USP31Q70CQ4 1352 aa6.41□□□□□ -1.38
PROM1-220ENST00000540805 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.41□□□□□ -1.38
PROM1-220ENST00000540805 SSFA2P28290 1259 aa6.41□□□□□ -1.38
PROM1-220ENST00000540805 ZFP91Q96JP5 570 aaPredicted RBP6.41□□□□□ -1.38
PROM1-220ENST00000540805 CGNQ9P2M7 1197 aaKnown RBP6.41□□□□□ -1.38
PROM1-220ENST00000540805 DMTNQ08495 405 aa6.41□□□□□ -1.38
PROM1-220ENST00000540805 ATF7IPQ6VMQ6 1270 aa6.41□□□□□ -1.38
PROM1-220ENST00000540805 NUDT16Q96DE0 195 aaKnown RBP6.41□□□□□ -1.38
PROM1-220ENST00000540805 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.41□□□□□ -1.38
PROM1-220ENST00000540805 G3V3G9 751 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 NUCB1Q02818 461 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 PSME1Q06323 249 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 GORABQ5T7V8 394 aa6.4□□□□□ -1.38
PROM1-220ENST00000540805 DCAF8Q5TAQ9 597 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms