RNA–Protein interactions for RNA: ENST00000539714.5

NCAPD2-208, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-208ENST00000539714 LMOD2Q6P5Q4 547 aa9.39□□□□□ -0.91
NCAPD2-208ENST00000539714 TMC1Q8TDI8 760 aa9.39□□□□□ -0.91
NCAPD2-208ENST00000539714 TERF2IPQ9NYB0 399 aa9.39□□□□□ -0.91
NCAPD2-208ENST00000539714 LHX6Q9UPM6 363 aa9.39□□□□□ -0.91
NCAPD2-208ENST00000539714 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
NCAPD2-208ENST00000539714 PSDA5PKW4 1024 aaPredicted RBP9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 FOSBP53539 338 aa9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 CC2D1BQ5T0F9 858 aaKnown RBP9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 HDGFL2Q7Z4V5 671 aaPredicted RBP9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 YTHDC1Q96MU7 727 aaKnown RBP9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 PCDHGA10Q9Y5H3 936 aa9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 DCCP43146 1447 aa9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 NCOA3Q9Y6Q9 1424 aa9.38□□□□□ -0.91
NCAPD2-208ENST00000539714 KCNA6P17658 529 aa9.37□□□□□ -0.91
NCAPD2-208ENST00000539714 CARD14Q9BXL6 1004 aa9.37□□□□□ -0.91
NCAPD2-208ENST00000539714 SLC12A5Q9H2X9 1139 aa9.37□□□□□ -0.91
NCAPD2-208ENST00000539714 TRPM3Q9HCF6 1732 aaPredicted RBP9.36□□□□□ -0.91
NCAPD2-208ENST00000539714 RBM26Q5T8P6 1007 aaKnown RBP9.36□□□□□ -0.91
NCAPD2-208ENST00000539714 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
NCAPD2-208ENST00000539714 ZNF454Q8N9F8 522 aa9.36□□□□□ -0.91
NCAPD2-208ENST00000539714 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
NCAPD2-208ENST00000539714 BLMP54132 1417 aaPredicted RBP9.36□□□□□ -0.91
NCAPD2-208ENST00000539714 PRR36Q9H6K5 1346 aa9.35□□□□□ -0.91
NCAPD2-208ENST00000539714 LTN1O94822 1766 aa9.35□□□□□ -0.91
NCAPD2-208ENST00000539714 USP6P35125 1406 aa9.35□□□□□ -0.91
NCAPD2-208ENST00000539714 NUDT16Q96DE0 195 aaKnown RBP9.35□□□□□ -0.91
NCAPD2-208ENST00000539714 POLR3AO14802 1390 aaPredicted RBP9.35□□□□□ -0.91
NCAPD2-208ENST00000539714 SMG6Q86US8 1419 aaKnown RBP9.34□□□□□ -0.91
NCAPD2-208ENST00000539714 CCDC184Q52MB2 194 aa9.34□□□□□ -0.91
NCAPD2-208ENST00000539714 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
NCAPD2-208ENST00000539714 PHRF1Q9P1Y6 1649 aaKnown RBP9.34□□□□□ -0.91
NCAPD2-208ENST00000539714 ERBB3P21860 1342 aa9.33□□□□□ -0.92
NCAPD2-208ENST00000539714 ALS2Q96Q42 1657 aa9.33□□□□□ -0.92
NCAPD2-208ENST00000539714 PPP2R1AP30153 589 aa9.33□□□□□ -0.92
NCAPD2-208ENST00000539714 CABP1Q9NZU7 370 aa9.33□□□□□ -0.92
NCAPD2-208ENST00000539714 COL3A1P02461 1466 aaPredicted RBP9.33□□□□□ -0.92
NCAPD2-208ENST00000539714 CDK12Q9NYV4 1490 aaPredicted RBP9.33□□□□□ -0.92
NCAPD2-208ENST00000539714 OVOS2A0A0J9YW53 1432 aa9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 OVOS2Q6IE36 1432 aa9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 SSH2Q76I76 1423 aa9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 PLEKHG3A1L390 1219 aa9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 EMP3P54852 163 aa9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 PPP4R3BQ5MIZ7 849 aa9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 MARVELD3Q96A59 401 aa9.32□□□□□ -0.92
NCAPD2-208ENST00000539714 ZBED9Q6R2W3 1325 aa9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 CRYBG1Q9Y4K1 1723 aa9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 EN1Q05925 392 aaPredicted RBP9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 MORC1Q86VD1 984 aa9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 RBM33Q96EV2 1170 aaKnown RBP9.31□□□□□ -0.92
NCAPD2-208ENST00000539714 MAP3K7O43318 606 aa9.3□□□□□ -0.92
NCAPD2-208ENST00000539714 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
NCAPD2-208ENST00000539714 FAM9BQ8IZU0 186 aa9.3□□□□□ -0.92
NCAPD2-208ENST00000539714 RGPD1P0DJD0 1748 aa9.3□□□□□ -0.92
NCAPD2-208ENST00000539714 PEAK1Q9H792 1746 aa9.3□□□□□ -0.92
NCAPD2-208ENST00000539714 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
NCAPD2-208ENST00000539714 TTC21AQ8NDW8 1320 aa9.3□□□□□ -0.92
NCAPD2-208ENST00000539714 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 AATKQ6ZMQ8 1374 aa9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 HSPA2P54652 639 aa9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 HNRNPUQ00839 825 aaKnown RBP eCLIP9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 ADAM33Q9BZ11 813 aa9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 MST1RQ04912 1400 aa9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 ACEP12821 1306 aa9.29□□□□□ -0.92
NCAPD2-208ENST00000539714 ABCA3Q99758 1704 aa9.28□□□□□ -0.92
NCAPD2-208ENST00000539714 FYB1O15117 783 aa9.28□□□□□ -0.92
NCAPD2-208ENST00000539714 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
NCAPD2-208ENST00000539714 GPIHBP1Q8IV16 184 aa9.28□□□□□ -0.92
NCAPD2-208ENST00000539714 ZC3H15Q8WU90 426 aaKnown RBP9.28□□□□□ -0.92
NCAPD2-208ENST00000539714 IQSEC2Q5JU85 1478 aa9.28□□□□□ -0.92
NCAPD2-208ENST00000539714 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
NCAPD2-208ENST00000539714 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 USP31Q70CQ4 1352 aa9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 FAM208AQ9UK61 1670 aaKnown RBP9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 FAM205CA6NFA0 338 aa9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 CFAP53Q96M91 514 aa9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 BCL2L12Q9HB09 334 aa9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 MED1Q15648 1581 aaPredicted RBP9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 TTC21BQ7Z4L5 1316 aa9.27□□□□□ -0.93
NCAPD2-208ENST00000539714 SLIT3O75094 1523 aa9.26□□□□□ -0.93
NCAPD2-208ENST00000539714 MSH6P52701 1360 aa9.26□□□□□ -0.93
NCAPD2-208ENST00000539714 WDR43Q15061 677 aaKnown RBP eCLIP9.26□□□□□ -0.934e-33■■■□□ 18.2
NCAPD2-208ENST00000539714 PROSER2Q86WR7 435 aaPredicted RBP9.26□□□□□ -0.93
NCAPD2-208ENST00000539714 GGNBP2Q9H3C7 697 aa9.26□□□□□ -0.93
NCAPD2-208ENST00000539714 VIRMAQ69YN4 1812 aaKnown RBP9.26□□□□□ -0.93
NCAPD2-208ENST00000539714 NFAT5O94916 1531 aa9.26□□□□□ -0.93
NCAPD2-208ENST00000539714 PNPLA6Q8IY17 1366 aa9.25□□□□□ -0.93
NCAPD2-208ENST00000539714 FCHSD2O94868 740 aa9.25□□□□□ -0.93
NCAPD2-208ENST00000539714 PRKCSHP14314 528 aaPredicted RBP9.25□□□□□ -0.93
NCAPD2-208ENST00000539714 TSR1Q2NL82 804 aaKnown RBP9.25□□□□□ -0.93
NCAPD2-208ENST00000539714 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
NCAPD2-208ENST00000539714 COG3Q96JB2 828 aa9.25□□□□□ -0.93
NCAPD2-208ENST00000539714 ABCC6O95255 1503 aa9.25□□□□□ -0.93
NCAPD2-208ENST00000539714 CAMTA1Q9Y6Y1 1673 aa9.24□□□□□ -0.93
NCAPD2-208ENST00000539714 PTPREP23469 700 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms