RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 DEFB132Q7Z7B7 95 aa11.29□□□□□ -0.6
GGA3-202ENST00000538886 HSP90AB1P08238 724 aaKnown RBP11.28□□□□□ -0.6
GGA3-202ENST00000538886 SLC4A10Q6U841 1118 aa11.28□□□□□ -0.6
GGA3-202ENST00000538886 LGR6Q9HBX8 967 aa11.28□□□□□ -0.6
GGA3-202ENST00000538886 NSD2O96028 1365 aa11.28□□□□□ -0.6
GGA3-202ENST00000538886 QRICH2Q9H0J4 1663 aa11.28□□□□□ -0.6
GGA3-202ENST00000538886 LAMC1P11047 1609 aa11.28□□□□□ -0.6
GGA3-202ENST00000538886 IL13P35225 146 aa11.28□□□□□ -0.6
GGA3-202ENST00000538886 BAG6P46379 1132 aa11.27□□□□□ -0.6
GGA3-202ENST00000538886 VPS72Q15906 364 aa11.27□□□□□ -0.6
GGA3-202ENST00000538886 TFCP2L1Q9NZI6 479 aa11.27□□□□□ -0.6
GGA3-202ENST00000538886 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
GGA3-202ENST00000538886 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
GGA3-202ENST00000538886 TMPOP42166 694 aaKnown RBP11.27□□□□□ -0.61
GGA3-202ENST00000538886 EN1Q05925 392 aaPredicted RBP11.27□□□□□ -0.61
GGA3-202ENST00000538886 GOLGA2Q08379 1002 aa11.27□□□□□ -0.61
GGA3-202ENST00000538886 STK31Q9BXU1 1019 aa11.27□□□□□ -0.61
GGA3-202ENST00000538886 NRXN3Q9Y4C0 1643 aa11.27□□□□□ -0.61
GGA3-202ENST00000538886 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
GGA3-202ENST00000538886 CALD1Q05682 793 aaKnown RBP11.26□□□□□ -0.61
GGA3-202ENST00000538886 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
GGA3-202ENST00000538886 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
GGA3-202ENST00000538886 NFE2L2Q16236 605 aa11.26□□□□□ -0.61
GGA3-202ENST00000538886 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
GGA3-202ENST00000538886 LTBP4Q8N2S1 1624 aa11.25□□□□□ -0.61
GGA3-202ENST00000538886 CPSF1Q10570 1443 aaKnown RBP11.25□□□□□ -0.61
GGA3-202ENST00000538886 CDCA7Q9BWT1 371 aaPredicted RBP11.25□□□□□ -0.61
GGA3-202ENST00000538886 ANXA1P04083 346 aa11.25□□□□□ -0.61
GGA3-202ENST00000538886 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
GGA3-202ENST00000538886 PCDH11XQ9BZA7 1347 aa11.25□□□□□ -0.61
GGA3-202ENST00000538886 PCDH11YQ9BZA8 1340 aa11.25□□□□□ -0.61
GGA3-202ENST00000538886 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
GGA3-202ENST00000538886 SPATA31A1Q5TZJ5 1347 aa11.24□□□□□ -0.61
GGA3-202ENST00000538886 AK7Q96M32 723 aa11.24□□□□□ -0.61
GGA3-202ENST00000538886 MYH16Q9H6N6 1097 aa11.24□□□□□ -0.61
GGA3-202ENST00000538886 CCNL1Q9UK58 526 aaPredicted RBP11.24□□□□□ -0.61
GGA3-202ENST00000538886 KDM5AP29375 1690 aaKnown RBP11.24□□□□□ -0.61
GGA3-202ENST00000538886 INSRP06213 1382 aa11.24□□□□□ -0.61
GGA3-202ENST00000538886 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
GGA3-202ENST00000538886 CHD2O14647 1828 aaKnown RBP11.23□□□□□ -0.61
GGA3-202ENST00000538886 BRD4O60885 1362 aaPredicted RBP11.23□□□□□ -0.61
GGA3-202ENST00000538886 FNBP4Q8N3X1 1017 aaPredicted RBP11.23□□□□□ -0.61
GGA3-202ENST00000538886 ROBO1Q9Y6N7 1651 aa11.23□□□□□ -0.61
GGA3-202ENST00000538886 CHMP3Q9Y3E7 222 aa11.23□□□□□ -0.61
GGA3-202ENST00000538886 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
GGA3-202ENST00000538886 ASAP1Q9ULH1 1129 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 SPATA31A5Q5VU36 1347 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 SPATA31A7Q8IWB4 1347 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 CDC42BPGQ6DT37 1551 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 KCNA4P22459 653 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 NBPF14Q5TI25 921 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 AKAP4Q5JQC9 854 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 MARCH10Q8NA82 808 aaPredicted RBP11.22□□□□□ -0.61
GGA3-202ENST00000538886 DCAF5Q96JK2 942 aa11.22□□□□□ -0.61
GGA3-202ENST00000538886 CYP27B1O15528 508 aa11.21□□□□□ -0.61
GGA3-202ENST00000538886 TAF7Q15545 349 aaPredicted RBP11.21□□□□□ -0.61
GGA3-202ENST00000538886 HDGFL1Q5TGJ6 251 aa11.21□□□□□ -0.61
GGA3-202ENST00000538886 VSIG10Q8N0Z9 540 aa11.21□□□□□ -0.61
GGA3-202ENST00000538886 NOP58Q9Y2X3 529 aaKnown RBP11.21□□□□□ -0.61
GGA3-202ENST00000538886 KRT24Q2M2I5 525 aa11.21□□□□□ -0.61
GGA3-202ENST00000538886 GNAI1P63096 354 aa11.21□□□□□ -0.62
GGA3-202ENST00000538886 SMIM5Q71RC9 77 aa11.21□□□□□ -0.62
GGA3-202ENST00000538886 USP19O94966 1318 aa11.21□□□□□ -0.62
GGA3-202ENST00000538886 PHKG2P15735 406 aa11.2□□□□□ -0.62
GGA3-202ENST00000538886 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
GGA3-202ENST00000538886 ARHGEF28Q8N1W1 1705 aaKnown RBP11.2□□□□□ -0.62
GGA3-202ENST00000538886 GNPATO15228 680 aa11.2□□□□□ -0.62
GGA3-202ENST00000538886 STARD3NLO95772 234 aa11.2□□□□□ -0.62
GGA3-202ENST00000538886 FKBP5Q13451 457 aaPredicted RBP11.2□□□□□ -0.62
GGA3-202ENST00000538886 MSL1Q68DK7 614 aa11.2□□□□□ -0.62
GGA3-202ENST00000538886 EXOSC9Q06265 439 aaKnown RBP11.19□□□□□ -0.62
GGA3-202ENST00000538886 RNMTO43148 476 aaKnown RBP11.19□□□□□ -0.62
GGA3-202ENST00000538886 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
GGA3-202ENST00000538886 THRAP3Q9Y2W1 955 aaKnown RBP11.19□□□□□ -0.62
GGA3-202ENST00000538886 CRB1P82279 1406 aa11.19□□□□□ -0.62
GGA3-202ENST00000538886 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
GGA3-202ENST00000538886 RIC3Q7Z5B4 369 aa11.19□□□□□ -0.62
GGA3-202ENST00000538886 TBC1D2BQ9UPU7 963 aa11.19□□□□□ -0.62
GGA3-202ENST00000538886 A0A0U1RQG5 324 aaPredicted RBP11.18□□□□□ -0.62
GGA3-202ENST00000538886 KCNQ3O43525 872 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 FANCIQ9NVI1 1328 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 ZPR1O75312 459 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 RFC4P35249 363 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 PTF1AQ7RTS3 328 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 NALCNQ8IZF0 1738 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 FMNL2Q96PY5 1086 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 ZBTB3Q9H5J0 574 aa11.18□□□□□ -0.62
GGA3-202ENST00000538886 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 STK32BQ9NY57 414 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
GGA3-202ENST00000538886 USP31Q70CQ4 1352 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 PIGBQ92521 554 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 PHLPP1O60346 1717 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 GPTP24298 496 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 DNAJC10Q8IXB1 793 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 IL17REQ8NFR9 667 aa11.17□□□□□ -0.62
GGA3-202ENST00000538886 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
GGA3-202ENST00000538886 XRN1Q8IZH2 1706 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms