RNA–Protein interactions for RNA: ENST00000536515.5

LGR5-202, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-202ENST00000536515 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
LGR5-202ENST00000536515 FSD2A1L4K1 749 aa16.3■□□□□ 0.2
LGR5-202ENST00000536515 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
LGR5-202ENST00000536515 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
LGR5-202ENST00000536515 DDX11L8A8MPP1 907 aa16.29■□□□□ 0.2
LGR5-202ENST00000536515 GSPT1P15170 499 aaKnown RBP16.29■□□□□ 0.2
LGR5-202ENST00000536515 MCM10Q7L590 875 aa16.29■□□□□ 0.2
LGR5-202ENST00000536515 PTPRUQ92729 1446 aa16.29■□□□□ 0.2
LGR5-202ENST00000536515 TNPO1Q92973 898 aaKnown RBP16.29■□□□□ 0.2
LGR5-202ENST00000536515 CDC45O75419 566 aa16.28■□□□□ 0.2
LGR5-202ENST00000536515 HSP90AA1P07900 732 aaKnown RBP16.28■□□□□ 0.2
LGR5-202ENST00000536515 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
LGR5-202ENST00000536515 PLEKHM2Q8IWE5 1019 aa16.28■□□□□ 0.2
LGR5-202ENST00000536515 DCTPP1Q9H773 170 aa16.28■□□□□ 0.2
LGR5-202ENST00000536515 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
LGR5-202ENST00000536515 ITSN1Q15811 1721 aa16.27■□□□□ 0.2
LGR5-202ENST00000536515 TTC21BQ7Z4L5 1316 aa16.27■□□□□ 0.19
LGR5-202ENST00000536515 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.19
LGR5-202ENST00000536515 C16orf71Q8IYS4 520 aaPredicted RBP16.27■□□□□ 0.19
LGR5-202ENST00000536515 PANK2Q9BZ23 570 aa16.27■□□□□ 0.19
LGR5-202ENST00000536515 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
LGR5-202ENST00000536515 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
LGR5-202ENST00000536515 KIF24Q5T7B8 1368 aa16.26■□□□□ 0.19
LGR5-202ENST00000536515 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
LGR5-202ENST00000536515 SOX12O15370 315 aa16.26■□□□□ 0.19
LGR5-202ENST00000536515 ACEP12821 1306 aa16.25■□□□□ 0.19
LGR5-202ENST00000536515 CHL1O00533 1208 aa16.25■□□□□ 0.19
LGR5-202ENST00000536515 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
LGR5-202ENST00000536515 RAB3GAP1Q15042 981 aa16.25■□□□□ 0.19
LGR5-202ENST00000536515 RGS12O14924 1447 aa16.24■□□□□ 0.19
LGR5-202ENST00000536515 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
LGR5-202ENST00000536515 ANKRD44Q8N8A2 993 aa16.24■□□□□ 0.19
LGR5-202ENST00000536515 NRKQ7Z2Y5 1582 aa16.24■□□□□ 0.19
LGR5-202ENST00000536515 OTUD7AQ8TE49 926 aaPredicted RBP16.24■□□□□ 0.19
LGR5-202ENST00000536515 ATP10DQ9P241 1426 aa16.24■□□□□ 0.19
LGR5-202ENST00000536515 APBB1O00213 710 aa16.23■□□□□ 0.19
LGR5-202ENST00000536515 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
LGR5-202ENST00000536515 RRAGDQ9NQL2 400 aaPredicted RBP16.23■□□□□ 0.19
LGR5-202ENST00000536515 CEP85Q6P2H3 762 aa16.23■□□□□ 0.19
LGR5-202ENST00000536515 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
LGR5-202ENST00000536515 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
LGR5-202ENST00000536515 MSH6P52701 1360 aa16.22■□□□□ 0.19
LGR5-202ENST00000536515 HAP1P54257 671 aaPredicted RBP16.22■□□□□ 0.19
LGR5-202ENST00000536515 MEIS3Q99687 375 aa16.22■□□□□ 0.19
LGR5-202ENST00000536515 MIS18AQ9NYP9 233 aa16.22■□□□□ 0.19
LGR5-202ENST00000536515 AMOTL2Q9Y2J4 779 aa16.22■□□□□ 0.19
LGR5-202ENST00000536515 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
LGR5-202ENST00000536515 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
LGR5-202ENST00000536515 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.19
LGR5-202ENST00000536515 OVOS2A0A0J9YW53 1432 aa16.21■□□□□ 0.19
LGR5-202ENST00000536515 OVOS2Q6IE36 1432 aa16.21■□□□□ 0.19
LGR5-202ENST00000536515 KCNA6P17658 529 aa16.21■□□□□ 0.19
LGR5-202ENST00000536515 RTL1A6NKG5 1358 aa16.21■□□□□ 0.19
LGR5-202ENST00000536515 KIAA0232Q92628 1395 aa16.21■□□□□ 0.19
LGR5-202ENST00000536515 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
LGR5-202ENST00000536515 MRE11P49959 708 aa16.2■□□□□ 0.18
LGR5-202ENST00000536515 FOXO3O43524 673 aa16.2■□□□□ 0.18
LGR5-202ENST00000536515 PTPRCP08575 1304 aa16.19■□□□□ 0.18
LGR5-202ENST00000536515 PLEKHG3A1L390 1219 aa16.19■□□□□ 0.18
LGR5-202ENST00000536515 SSFA2P28290 1259 aa16.19■□□□□ 0.18
LGR5-202ENST00000536515 USP6P35125 1406 aa16.19■□□□□ 0.18
LGR5-202ENST00000536515 PEAK1Q9H792 1746 aa16.19■□□□□ 0.18
LGR5-202ENST00000536515 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.19■□□□□ 0.18
LGR5-202ENST00000536515 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
LGR5-202ENST00000536515 CRB1P82279 1406 aa16.18■□□□□ 0.18
LGR5-202ENST00000536515 SDSP20132 328 aa16.18■□□□□ 0.18
LGR5-202ENST00000536515 USP26Q9BXU7 913 aa16.18■□□□□ 0.18
LGR5-202ENST00000536515 RABEP1Q15276 862 aa16.17■□□□□ 0.18
LGR5-202ENST00000536515 MAP3K19Q56UN5 1328 aa16.17■□□□□ 0.18
LGR5-202ENST00000536515 SLC4A10Q6U841 1118 aa16.17■□□□□ 0.18
LGR5-202ENST00000536515 G2E3Q7L622 706 aa16.17■□□□□ 0.18
LGR5-202ENST00000536515 F6X3S4 739 aa16.16■□□□□ 0.18
LGR5-202ENST00000536515 MTHFSDQ2M296 383 aaKnown RBP16.16■□□□□ 0.18
LGR5-202ENST00000536515 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
LGR5-202ENST00000536515 USP31Q70CQ4 1352 aa16.15■□□□□ 0.18
LGR5-202ENST00000536515 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
LGR5-202ENST00000536515 SKOR2Q2VWA4 1001 aaPredicted RBP16.15■□□□□ 0.18
LGR5-202ENST00000536515 GAS2L3Q86XJ1 694 aa16.15■□□□□ 0.18
LGR5-202ENST00000536515 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
LGR5-202ENST00000536515 RGPD1P0DJD0 1748 aa16.15■□□□□ 0.18
LGR5-202ENST00000536515 NALCNQ8IZF0 1738 aa16.15■□□□□ 0.18
LGR5-202ENST00000536515 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
LGR5-202ENST00000536515 CASC1Q6TDU7 716 aa16.14■□□□□ 0.17
LGR5-202ENST00000536515 ISY1Q9ULR0 285 aaKnown RBP16.13■□□□□ 0.17
LGR5-202ENST00000536515 ARHGEF10O15013 1369 aa16.13■□□□□ 0.17
LGR5-202ENST00000536515 PTMSP20962 102 aa16.13■□□□□ 0.17
LGR5-202ENST00000536515 HMMRO75330 724 aa16.12■□□□□ 0.17
LGR5-202ENST00000536515 AK9Q5TCS8 1911 aa16.12■□□□□ 0.17
LGR5-202ENST00000536515 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
LGR5-202ENST00000536515 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
LGR5-202ENST00000536515 BAG4O95429 457 aaKnown RBP16.12■□□□□ 0.17
LGR5-202ENST00000536515 XIRP1Q702N8 1843 aaKnown RBP16.11■□□□□ 0.17
LGR5-202ENST00000536515 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
LGR5-202ENST00000536515 AMPHP49418 695 aa16.11■□□□□ 0.17
LGR5-202ENST00000536515 EYA1Q99502 592 aa16.11■□□□□ 0.17
LGR5-202ENST00000536515 CCT4P50991 539 aaKnown RBP16.11■□□□□ 0.17
LGR5-202ENST00000536515 ZNF335Q9H4Z2 1342 aaPredicted RBP16.1■□□□□ 0.17
LGR5-202ENST00000536515 FLT4P35916 1363 aa16.1■□□□□ 0.17
LGR5-202ENST00000536515 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
LGR5-202ENST00000536515 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms