RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 EYA1Q99502 592 aa11.42□□□□□ -0.58
SF3B2-216ENST00000534765 C1orf167Q5SNV9 1468 aa11.42□□□□□ -0.58
SF3B2-216ENST00000534765 MYH16Q9H6N6 1097 aa11.42□□□□□ -0.58
SF3B2-216ENST00000534765 MCM10Q7L590 875 aa11.42□□□□□ -0.58
SF3B2-216ENST00000534765 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
SF3B2-216ENST00000534765 MST1RQ04912 1400 aa11.42□□□□□ -0.58
SF3B2-216ENST00000534765 FCHSD2O94868 740 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 BACH2Q9BYV9 841 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 MIS18AQ9NYP9 233 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 ALS2Q96Q42 1657 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 GOLGB1Q14789 3259 aaKnown RBP11.41□□□□□ -0.58
SF3B2-216ENST00000534765 EP400Q96L91 3159 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 LTV1Q96GA3 475 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-216ENST00000534765 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 HOXC9P31274 260 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 CABLES1Q8TDN4 633 aa11.41□□□□□ -0.58
SF3B2-216ENST00000534765 ELL2O00472 640 aaPredicted RBP11.4□□□□□ -0.58
SF3B2-216ENST00000534765 C14orf37Q86TY3 774 aa11.4□□□□□ -0.58
SF3B2-216ENST00000534765 WDR63Q8IWG1 891 aa11.4□□□□□ -0.58
SF3B2-216ENST00000534765 LRRC59Q96AG4 307 aaKnown RBP11.4□□□□□ -0.58
SF3B2-216ENST00000534765 CLUAP1Q96AJ1 413 aa11.4□□□□□ -0.58
SF3B2-216ENST00000534765 IGHDP01880 384 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 CRYBG1Q9Y4K1 1723 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 MTHFSDQ2M296 383 aaKnown RBP11.39□□□□□ -0.59
SF3B2-216ENST00000534765 KIAA1211Q6ZU35 1233 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 COG6Q9Y2V7 657 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 TTC21AQ8NDW8 1320 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 NFE2L2Q16236 605 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 PDCL3Q9H2J4 239 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 MBIPQ9NS73 344 aa11.39□□□□□ -0.59
SF3B2-216ENST00000534765 C8orf58Q8NAV2 365 aa11.38□□□□□ -0.59
SF3B2-216ENST00000534765 SBNO1A3KN83 1393 aa11.37□□□□□ -0.59
SF3B2-216ENST00000534765 ZNF853P0CG23 659 aa11.37□□□□□ -0.59
SF3B2-216ENST00000534765 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
SF3B2-216ENST00000534765 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
SF3B2-216ENST00000534765 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
SF3B2-216ENST00000534765 KDM2BQ8NHM5 1336 aa11.37□□□□□ -0.59
SF3B2-216ENST00000534765 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
SF3B2-216ENST00000534765 PSME1Q06323 249 aa11.37□□□□□ -0.59
SF3B2-216ENST00000534765 MAPK8IP3Q9UPT6 1336 aa11.37□□□□□ -0.59
SF3B2-216ENST00000534765 MSNP26038 577 aaKnown RBP11.36□□□□□ -0.59
SF3B2-216ENST00000534765 IGSF1Q8N6C5 1336 aa11.36□□□□□ -0.59
SF3B2-216ENST00000534765 FLT4P35916 1363 aa11.36□□□□□ -0.59
SF3B2-216ENST00000534765 R3HCC1Q9Y3T6 440 aaKnown RBP11.36□□□□□ -0.59
SF3B2-216ENST00000534765 KDRP35968 1356 aa11.36□□□□□ -0.59
SF3B2-216ENST00000534765 MSH6P52701 1360 aa11.36□□□□□ -0.59
SF3B2-216ENST00000534765 BECN1Q14457 450 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 TAF7LQ5H9L4 462 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 CRB1P82279 1406 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 SLIT3O75094 1523 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 ESPNB1AK53 854 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 PXDNQ92626 1479 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 COL18A1P39060 1754 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 PCDHB15Q9Y5E8 787 aa11.35□□□□□ -0.59
SF3B2-216ENST00000534765 PHRF1Q9P1Y6 1649 aaKnown RBP11.34□□□□□ -0.59
SF3B2-216ENST00000534765 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
SF3B2-216ENST00000534765 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
SF3B2-216ENST00000534765 AMPHP49418 695 aa11.34□□□□□ -0.59
SF3B2-216ENST00000534765 CALD1Q05682 793 aaKnown RBP11.34□□□□□ -0.59
SF3B2-216ENST00000534765 DNTTIP2Q5QJE6 756 aaKnown RBP11.34□□□□□ -0.59
SF3B2-216ENST00000534765 KRT28Q7Z3Y7 464 aa11.34□□□□□ -0.59
SF3B2-216ENST00000534765 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
SF3B2-216ENST00000534765 VAMP4O75379 141 aa11.33□□□□□ -0.6
SF3B2-216ENST00000534765 GCP02774 474 aa11.33□□□□□ -0.6
SF3B2-216ENST00000534765 TRIM27P14373 513 aa11.33□□□□□ -0.6
SF3B2-216ENST00000534765 CLCN1P35523 988 aa11.33□□□□□ -0.6
SF3B2-216ENST00000534765 LRRC37A3O60309 1634 aa11.33□□□□□ -0.6
SF3B2-216ENST00000534765 ZC3H6P61129 1189 aaKnown RBP11.33□□□□□ -0.6
SF3B2-216ENST00000534765 NOB1Q9ULX3 412 aaKnown RBP11.33□□□□□ -0.6
SF3B2-216ENST00000534765 TPM2P07951 284 aa11.33□□□□□ -0.6
SF3B2-216ENST00000534765 BRINP3Q76B58 766 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 IL17REQ8NFR9 667 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 ARHGEF10O15013 1369 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 XRCC6P12956 609 aaKnown RBP eCLIP11.31□□□□□ -0.6
SF3B2-216ENST00000534765 CHRNA2Q15822 529 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 LGR6Q9HBX8 967 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 USP19O94966 1318 aa11.31□□□□□ -0.6
SF3B2-216ENST00000534765 FAM208AQ9UK61 1670 aaKnown RBP11.31□□□□□ -0.6
SF3B2-216ENST00000534765 KIF1AQ12756 1690 aa11.3□□□□□ -0.6
SF3B2-216ENST00000534765 KCNQ3O43525 872 aa11.29□□□□□ -0.6
SF3B2-216ENST00000534765 RGS12O14924 1447 aa11.29□□□□□ -0.6
SF3B2-216ENST00000534765 IP6K1Q92551 441 aa11.29□□□□□ -0.6
SF3B2-216ENST00000534765 LMO7Q8WWI1 1683 aa11.29□□□□□ -0.6
SF3B2-216ENST00000534765 CAMTA1Q9Y6Y1 1673 aa11.29□□□□□ -0.6
SF3B2-216ENST00000534765 TMEM57Q8N5G2 664 aa11.29□□□□□ -0.6
SF3B2-216ENST00000534765 SMC4Q9NTJ3 1288 aa11.29□□□□□ -0.6
SF3B2-216ENST00000534765 IL16Q14005 1332 aa11.28□□□□□ -0.6
SF3B2-216ENST00000534765 MS4A1P11836 297 aa11.28□□□□□ -0.6
SF3B2-216ENST00000534765 NCBP3Q53F19 620 aaKnown RBP11.28□□□□□ -0.6
SF3B2-216ENST00000534765 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
SF3B2-216ENST00000534765 UPF2Q9HAU5 1272 aaKnown RBP11.28□□□□□ -0.6
SF3B2-216ENST00000534765 ABCA3Q99758 1704 aa11.28□□□□□ -0.6
SF3B2-216ENST00000534765 MRPL50Q8N5N7 158 aaKnown RBP11.28□□□□□ -0.6
SF3B2-216ENST00000534765 NGEFQ8N5V2 710 aa11.28□□□□□ -0.6
SF3B2-216ENST00000534765 CHL1O00533 1208 aa11.27□□□□□ -0.6
SF3B2-216ENST00000534765 G2E3Q7L622 706 aa11.27□□□□□ -0.61
SF3B2-216ENST00000534765 PRAMEF22A3QJZ6 481 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms