RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 H3BM21 787 aa12.64□□□□□ -0.39
CHKA-205ENST00000530730 ABCA5Q8WWZ7 1642 aa12.62□□□□□ -0.39
CHKA-205ENST00000530730 BMP2P12643 396 aa12.62□□□□□ -0.39
CHKA-205ENST00000530730 INSM1Q01101 510 aaPredicted RBP12.62□□□□□ -0.39
CHKA-205ENST00000530730 INTS6LQ5JSJ4 861 aaKnown RBP12.62□□□□□ -0.39
CHKA-205ENST00000530730 C6orf118Q5T5N4 469 aa12.62□□□□□ -0.39
CHKA-205ENST00000530730 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
CHKA-205ENST00000530730 IRF7Q92985 503 aa12.61□□□□□ -0.39
CHKA-205ENST00000530730 GJD4Q96KN9 370 aaPredicted RBP12.61□□□□□ -0.39
CHKA-205ENST00000530730 SOS2Q07890 1332 aaPredicted RBP12.61□□□□□ -0.39
CHKA-205ENST00000530730 BANK1Q8NDB2 785 aa12.6□□□□□ -0.39
CHKA-205ENST00000530730 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
CHKA-205ENST00000530730 MAN1A2O60476 641 aa12.59□□□□□ -0.39
CHKA-205ENST00000530730 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
CHKA-205ENST00000530730 ESPNB1AK53 854 aa12.58□□□□□ -0.4
CHKA-205ENST00000530730 NUP160Q12769 1436 aa12.57□□□□□ -0.4
CHKA-205ENST00000530730 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
CHKA-205ENST00000530730 SEPT12Q8IYM1 358 aa12.57□□□□□ -0.4
CHKA-205ENST00000530730 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
CHKA-205ENST00000530730 TOP2BQ02880 1626 aa12.56□□□□□ -0.4
CHKA-205ENST00000530730 SPINT1O43278 529 aa12.56□□□□□ -0.4
CHKA-205ENST00000530730 VSIG8P0DPA2 414 aa12.56□□□□□ -0.4
CHKA-205ENST00000530730 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
CHKA-205ENST00000530730 SOBPA7XYQ1 873 aa12.55□□□□□ -0.4
CHKA-205ENST00000530730 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
CHKA-205ENST00000530730 CBLBQ13191 982 aa12.55□□□□□ -0.4
CHKA-205ENST00000530730 TRIM52Q96A61 297 aa12.54□□□□□ -0.4
CHKA-205ENST00000530730 STK17AQ9UEE5 414 aa12.54□□□□□ -0.4
CHKA-205ENST00000530730 DNMT3LQ9UJW3 386 aa12.54□□□□□ -0.4
CHKA-205ENST00000530730 BIVM-ERCC5R4GMW8 1640 aa12.54□□□□□ -0.4
CHKA-205ENST00000530730 ADAMTS12P58397 1594 aa12.53□□□□□ -0.4
CHKA-205ENST00000530730 CEP170Q5SW79 1584 aa12.53□□□□□ -0.4
CHKA-205ENST00000530730 TTLL8A6PVC2 850 aa12.52□□□□□ -0.41
CHKA-205ENST00000530730 VEGFBP49765 207 aa12.52□□□□□ -0.41
CHKA-205ENST00000530730 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.52□□□□□ -0.41
CHKA-205ENST00000530730 CCDC125Q86Z20 511 aa12.52□□□□□ -0.41
CHKA-205ENST00000530730 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
CHKA-205ENST00000530730 GMPRP36959 345 aa12.51□□□□□ -0.41
CHKA-205ENST00000530730 ERICH3Q5RHP9 1530 aa12.51□□□□□ -0.41
CHKA-205ENST00000530730 APBB1O00213 710 aa12.5□□□□□ -0.41
CHKA-205ENST00000530730 FBXO45P0C2W1 286 aa12.5□□□□□ -0.41
CHKA-205ENST00000530730 ZNF592Q92610 1267 aa12.5□□□□□ -0.41
CHKA-205ENST00000530730 ERVH48-1M5A8F1 160 aa12.49□□□□□ -0.41
CHKA-205ENST00000530730 MCCD1P59942 119 aaPredicted RBP12.49□□□□□ -0.41
CHKA-205ENST00000530730 ZNF784Q8NCA9 323 aaPredicted RBP12.49□□□□□ -0.41
CHKA-205ENST00000530730 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
CHKA-205ENST00000530730 LILRA1O75019 489 aa12.48□□□□□ -0.41
CHKA-205ENST00000530730 PPFIA3O75145 1194 aa12.48□□□□□ -0.41
CHKA-205ENST00000530730 MTMR14Q8NCE2 650 aa12.48□□□□□ -0.41
CHKA-205ENST00000530730 TMPRSS4Q9NRS4 437 aa12.48□□□□□ -0.41
CHKA-205ENST00000530730 GPR37L1O60883 481 aa12.47□□□□□ -0.41
CHKA-205ENST00000530730 ADH1AP07327 375 aa12.47□□□□□ -0.41
CHKA-205ENST00000530730 NR1H3Q13133 447 aa12.46□□□□□ -0.41
CHKA-205ENST00000530730 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.41
CHKA-205ENST00000530730 SHROOM2Q13796 1616 aa12.46□□□□□ -0.41
CHKA-205ENST00000530730 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
CHKA-205ENST00000530730 PCDHB9Q9Y5E1 797 aa12.44□□□□□ -0.42
CHKA-205ENST00000530730 IGF1RP08069 1367 aa12.43□□□□□ -0.42
CHKA-205ENST00000530730 LORP23490 312 aaPredicted RBP12.43□□□□□ -0.42
CHKA-205ENST00000530730 ADD1P35611 737 aaKnown RBP12.43□□□□□ -0.42
CHKA-205ENST00000530730 RELBQ01201 579 aa12.43□□□□□ -0.42
CHKA-205ENST00000530730 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
CHKA-205ENST00000530730 RAB15P59190 212 aa12.42□□□□□ -0.42
CHKA-205ENST00000530730 PTSQ03393 145 aa12.42□□□□□ -0.42
CHKA-205ENST00000530730 RNF20Q5VTR2 975 aa12.42□□□□□ -0.42
CHKA-205ENST00000530730 KDF1Q8NAX2 398 aaPredicted RBP12.42□□□□□ -0.42
CHKA-205ENST00000530730 GIGYF1O75420 1035 aaPredicted RBP12.41□□□□□ -0.42
CHKA-205ENST00000530730 PTGIRP43119 386 aa12.41□□□□□ -0.42
CHKA-205ENST00000530730 CTSOP43234 321 aaPredicted RBP12.41□□□□□ -0.42
CHKA-205ENST00000530730 INSM2Q96T92 566 aaPredicted RBP12.41□□□□□ -0.42
CHKA-205ENST00000530730 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
CHKA-205ENST00000530730 RNF217Q8TC41 542 aa12.4□□□□□ -0.42
CHKA-205ENST00000530730 FAM181BA6NEQ2 426 aa12.39□□□□□ -0.43
CHKA-205ENST00000530730 FIGNL2A6NMB9 653 aa12.39□□□□□ -0.43
CHKA-205ENST00000530730 ZSCAN1Q8NBB4 408 aa12.39□□□□□ -0.43
CHKA-205ENST00000530730 SLC35F4A4IF30 521 aa12.38□□□□□ -0.43
CHKA-205ENST00000530730 FAM69CQ0P6D2 419 aa12.38□□□□□ -0.43
CHKA-205ENST00000530730 NANOS1Q8WY41 292 aaKnown RBP12.38□□□□□ -0.43
CHKA-205ENST00000530730 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
CHKA-205ENST00000530730 ERVK-9P63128 1117 aa12.37□□□□□ -0.43
CHKA-205ENST00000530730 ZNF395Q9H8N7 513 aaPredicted RBP12.37□□□□□ -0.43
CHKA-205ENST00000530730 POLMQ9NP87 494 aaPredicted RBP12.37□□□□□ -0.43
CHKA-205ENST00000530730 CYLDQ9NQC7 956 aa12.37□□□□□ -0.43
CHKA-205ENST00000530730 CCDC155Q8N6L0 562 aa12.36□□□□□ -0.43
CHKA-205ENST00000530730 KIAA0586Q9BVV6 1533 aa12.36□□□□□ -0.43
CHKA-205ENST00000530730 FOXD4L5Q5VV16 416 aaPredicted RBP12.35□□□□□ -0.43
CHKA-205ENST00000530730 RUSC2Q8N2Y8 1516 aa12.35□□□□□ -0.43
CHKA-205ENST00000530730 CC2D2BQ6DHV5 1058 aa12.34□□□□□ -0.43
CHKA-205ENST00000530730 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
CHKA-205ENST00000530730 GPC1P35052 558 aa12.33□□□□□ -0.44
CHKA-205ENST00000530730 RNF144AP50876 292 aaPredicted RBP12.33□□□□□ -0.44
CHKA-205ENST00000530730 PRM3Q9NNZ6 103 aa12.33□□□□□ -0.44
CHKA-205ENST00000530730 ABCC10Q5T3U5 1492 aa12.33□□□□□ -0.44
CHKA-205ENST00000530730 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
CHKA-205ENST00000530730 SENP3-EIF4A1A0A087X0R7 540 aa12.3□□□□□ -0.44
CHKA-205ENST00000530730 ITGA6P23229 1130 aa12.3□□□□□ -0.44
CHKA-205ENST00000530730 LYSMD3Q7Z3D4 306 aa12.3□□□□□ -0.44
CHKA-205ENST00000530730 KIF13AQ9H1H9 1805 aa12.3□□□□□ -0.44
CHKA-205ENST00000530730 PTPRGP23470 1445 aa12.29□□□□□ -0.44
CHKA-205ENST00000530730 TTBK1Q5TCY1 1321 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms