RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 MYT1Q01538 1121 aa12.15□□□□□ -0.46
POLB-216ENST00000530566 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
POLB-216ENST00000530566 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
POLB-216ENST00000530566 SLC52A1Q9NWF4 448 aa12.15□□□□□ -0.46
POLB-216ENST00000530566 MYOM2P54296 1465 aa12.14□□□□□ -0.47
POLB-216ENST00000530566 EHBP1L1Q8N3D4 1523 aa12.14□□□□□ -0.47
POLB-216ENST00000530566 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
POLB-216ENST00000530566 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
POLB-216ENST00000530566 TRPM2O94759 1503 aa12.13□□□□□ -0.47
POLB-216ENST00000530566 KCNQ2O43526 872 aa12.13□□□□□ -0.47
POLB-216ENST00000530566 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
POLB-216ENST00000530566 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
POLB-216ENST00000530566 RPRD2Q5VT52 1461 aaKnown RBP12.13□□□□□ -0.47
POLB-216ENST00000530566 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
POLB-216ENST00000530566 RGPD1P0DJD0 1748 aa12.12□□□□□ -0.47
POLB-216ENST00000530566 KANK1Q14678 1352 aa12.12□□□□□ -0.47
POLB-216ENST00000530566 LAMC1P11047 1609 aa12.11□□□□□ -0.47
POLB-216ENST00000530566 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
POLB-216ENST00000530566 NPDC1Q9NQX5 325 aaPredicted RBP12.11□□□□□ -0.47
POLB-216ENST00000530566 SLIT2O94813 1529 aa12.11□□□□□ -0.47
POLB-216ENST00000530566 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
POLB-216ENST00000530566 C1orf167Q5SNV9 1468 aa12.1□□□□□ -0.47
POLB-216ENST00000530566 VPS72Q15906 364 aa12.1□□□□□ -0.47
POLB-216ENST00000530566 NBPF8Q3BBV2 869 aa12.1□□□□□ -0.47
POLB-216ENST00000530566 NBPF14Q5TI25 921 aa12.1□□□□□ -0.47
POLB-216ENST00000530566 PADI6Q6TGC4 694 aa12.1□□□□□ -0.47
POLB-216ENST00000530566 TTC13Q8NBP0 860 aa12.1□□□□□ -0.47
POLB-216ENST00000530566 PTPRUQ92729 1446 aa12.1□□□□□ -0.47
POLB-216ENST00000530566 RNF40O75150 1001 aa12.09□□□□□ -0.47
POLB-216ENST00000530566 MLLT3P42568 568 aaPredicted RBP12.09□□□□□ -0.47
POLB-216ENST00000530566 ORAI2Q96SN7 254 aa12.09□□□□□ -0.47
POLB-216ENST00000530566 UTRNP46939 3433 aa12.08□□□□□ -0.48
POLB-216ENST00000530566 DUOX2Q9NRD8 1548 aa12.08□□□□□ -0.48
POLB-216ENST00000530566 C3orf80F5H4A9 247 aa12.08□□□□□ -0.48
POLB-216ENST00000530566 CAMKK2Q96RR4 588 aa12.08□□□□□ -0.48
POLB-216ENST00000530566 NOS1P29475 1434 aa12.08□□□□□ -0.48
POLB-216ENST00000530566 ADGRL3Q9HAR2 1447 aa12.08□□□□□ -0.48
POLB-216ENST00000530566 FAM182BQ5T319 152 aa12.07□□□□□ -0.48
POLB-216ENST00000530566 SLF2Q8IX21 1173 aa12.07□□□□□ -0.48
POLB-216ENST00000530566 IRX2Q9BZI1 471 aaPredicted RBP12.06□□□□□ -0.48
POLB-216ENST00000530566 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
POLB-216ENST00000530566 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
POLB-216ENST00000530566 ADGRB2O60241 1585 aa12.05□□□□□ -0.48
POLB-216ENST00000530566 CHD4Q14839 1912 aa12.04□□□□□ -0.48
POLB-216ENST00000530566 MYO5BQ9ULV0 1848 aa12.04□□□□□ -0.48
POLB-216ENST00000530566 TNS1Q9HBL0 1735 aaKnown RBP12.03□□□□□ -0.48
POLB-216ENST00000530566 APBA3O96018 575 aa12.03□□□□□ -0.48
POLB-216ENST00000530566 PLCB2Q00722 1185 aa12.03□□□□□ -0.48
POLB-216ENST00000530566 PTGDRQ13258 359 aa12.03□□□□□ -0.48
POLB-216ENST00000530566 IL21Q9HBE4 155 aa12.03□□□□□ -0.48
POLB-216ENST00000530566 NPHP3Q7Z494 1330 aa12.03□□□□□ -0.48
POLB-216ENST00000530566 GCC2Q8IWJ2 1684 aa12.03□□□□□ -0.48
POLB-216ENST00000530566 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
POLB-216ENST00000530566 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
POLB-216ENST00000530566 NALCNQ8IZF0 1738 aa12.02□□□□□ -0.49
POLB-216ENST00000530566 ERBINQ96RT1 1412 aa12.02□□□□□ -0.49
POLB-216ENST00000530566 LMTK2Q8IWU2 1503 aa12.01□□□□□ -0.49
POLB-216ENST00000530566 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
POLB-216ENST00000530566 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
POLB-216ENST00000530566 TRIM37O94972 964 aa12.01□□□□□ -0.49
POLB-216ENST00000530566 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
POLB-216ENST00000530566 TJAP1Q5JTD0 557 aa12.01□□□□□ -0.49
POLB-216ENST00000530566 EYA1Q99502 592 aa12.01□□□□□ -0.49
POLB-216ENST00000530566 XPCQ01831 940 aaPredicted RBP12□□□□□ -0.49
POLB-216ENST00000530566 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
POLB-216ENST00000530566 MTRQ99707 1265 aa12□□□□□ -0.49
POLB-216ENST00000530566 PRR14Q9BWN1 585 aa12□□□□□ -0.49
POLB-216ENST00000530566 KIF15Q9NS87 1388 aa12□□□□□ -0.49
POLB-216ENST00000530566 FAM83GA6ND36 823 aa11.99□□□□□ -0.49
POLB-216ENST00000530566 HSPA6P17066 643 aa11.99□□□□□ -0.49
POLB-216ENST00000530566 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
POLB-216ENST00000530566 NRKQ7Z2Y5 1582 aa11.98□□□□□ -0.49
POLB-216ENST00000530566 RRP7BPQ9NSQ0 103 aa11.98□□□□□ -0.49
POLB-216ENST00000530566 USP32Q8NFA0 1604 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 PXDNQ92626 1479 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 FOXO3O43524 673 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 DNAJB2P25686 324 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 APLP1P51693 650 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 PRELPP51888 382 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 ESCO1Q5FWF5 840 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 SYT17Q9BSW7 474 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 NUP188Q5SRE5 1749 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 RREB1Q92766 1687 aa11.97□□□□□ -0.49
POLB-216ENST00000530566 ADGRL2O95490 1459 aa11.96□□□□□ -0.49
POLB-216ENST00000530566 SEMA3EO15041 775 aa11.96□□□□□ -0.49
POLB-216ENST00000530566 FCHSD2O94868 740 aa11.96□□□□□ -0.49
POLB-216ENST00000530566 SMYD5Q6GMV2 418 aa11.96□□□□□ -0.49
POLB-216ENST00000530566 FAM196AQ6ZSG2 479 aa11.96□□□□□ -0.49
POLB-216ENST00000530566 FHDC1Q9C0D6 1143 aaPredicted RBP11.96□□□□□ -0.49
POLB-216ENST00000530566 NWD2Q9ULI1 1742 aa11.95□□□□□ -0.5
POLB-216ENST00000530566 METP08581 1390 aa11.94□□□□□ -0.5
POLB-216ENST00000530566 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
POLB-216ENST00000530566 PLCH1Q4KWH8 1693 aa11.94□□□□□ -0.5
POLB-216ENST00000530566 COL13A1Q5TAT6 717 aaPredicted RBP11.93□□□□□ -0.5
POLB-216ENST00000530566 ADGRG1Q9Y653 693 aa11.93□□□□□ -0.5
POLB-216ENST00000530566 MYOM1P52179 1685 aa11.93□□□□□ -0.5
POLB-216ENST00000530566 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
POLB-216ENST00000530566 GPR162Q16538 588 aa11.92□□□□□ -0.5
POLB-216ENST00000530566 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
POLB-216ENST00000530566 SPATA31A3Q5VYP0 1347 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms