RNA–Protein interactions for RNA: ENST00000526539.2

SLC38A6-209, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-209ENST00000526539 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
SLC38A6-209ENST00000526539 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
SLC38A6-209ENST00000526539 ESPNB1AK53 854 aa11.24□□□□□ -0.61
SLC38A6-209ENST00000526539 BMP1P13497 986 aa11.24□□□□□ -0.61
SLC38A6-209ENST00000526539 PPP1R26Q5T8A7 1209 aaPredicted RBP11.24□□□□□ -0.61
SLC38A6-209ENST00000526539 TRIM46Q7Z4K8 759 aa11.24□□□□□ -0.61
SLC38A6-209ENST00000526539 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
SLC38A6-209ENST00000526539 FLIIQ13045 1269 aa11.23□□□□□ -0.61
SLC38A6-209ENST00000526539 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
SLC38A6-209ENST00000526539 ABL2P42684 1182 aa11.22□□□□□ -0.61
SLC38A6-209ENST00000526539 DHX9Q08211 1270 aaKnown RBP11.22□□□□□ -0.61
SLC38A6-209ENST00000526539 COG6Q9Y2V7 657 aa11.22□□□□□ -0.61
SLC38A6-209ENST00000526539 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
SLC38A6-209ENST00000526539 MCCD1P59942 119 aaPredicted RBP11.21□□□□□ -0.61
SLC38A6-209ENST00000526539 EFCAB5A4FU69 1503 aa11.2□□□□□ -0.62
SLC38A6-209ENST00000526539 KIAA0586Q9BVV6 1533 aa11.2□□□□□ -0.62
SLC38A6-209ENST00000526539 LOC105371045A0A1W2PR82 267 aa11.2□□□□□ -0.62
SLC38A6-209ENST00000526539 RAB15P59190 212 aa11.2□□□□□ -0.62
SLC38A6-209ENST00000526539 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
SLC38A6-209ENST00000526539 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 C11orf95C9JLR9 678 aaPredicted RBP11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 MRPL14Q6P1L8 145 aaKnown RBP11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 ZNF592Q92610 1267 aa11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 TRIM47Q96LD4 638 aa11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
SLC38A6-209ENST00000526539 NUP160Q12769 1436 aa11.18□□□□□ -0.62
SLC38A6-209ENST00000526539 ERVH48-1M5A8F1 160 aa11.18□□□□□ -0.62
SLC38A6-209ENST00000526539 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
SLC38A6-209ENST00000526539 POM121Q96HA1 1249 aa11.18□□□□□ -0.62
SLC38A6-209ENST00000526539 CLIP1P30622 1438 aa11.18□□□□□ -0.62
SLC38A6-209ENST00000526539 VAC14Q08AM6 782 aa11.17□□□□□ -0.62
SLC38A6-209ENST00000526539 KIFC2Q96AC6 838 aa11.17□□□□□ -0.62
SLC38A6-209ENST00000526539 TMPRSS4Q9NRS4 437 aa11.17□□□□□ -0.62
SLC38A6-209ENST00000526539 SNRPBP14678 240 aaKnown RBP11.16□□□□□ -0.62
SLC38A6-209ENST00000526539 CBLBQ13191 982 aa11.16□□□□□ -0.62
SLC38A6-209ENST00000526539 ZFP42Q96MM3 310 aa11.16□□□□□ -0.62
SLC38A6-209ENST00000526539 CTTNBP2Q8WZ74 1663 aa11.16□□□□□ -0.62
SLC38A6-209ENST00000526539 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
SLC38A6-209ENST00000526539 EIF4G2P78344 907 aaKnown RBP eCLIP11.15□□□□□ -0.62
SLC38A6-209ENST00000526539 SCARF1Q14162 830 aa11.15□□□□□ -0.62
SLC38A6-209ENST00000526539 WASHC4Q2M389 1173 aa11.15□□□□□ -0.62
SLC38A6-209ENST00000526539 Q6ZVU0 165 aa11.15□□□□□ -0.62
SLC38A6-209ENST00000526539 ZNF784Q8NCA9 323 aaPredicted RBP11.15□□□□□ -0.62
SLC38A6-209ENST00000526539 PURBQ96QR8 312 aaKnown RBP11.15□□□□□ -0.62
SLC38A6-209ENST00000526539 LINC00528Q8N1L1 170 aa11.14□□□□□ -0.63
SLC38A6-209ENST00000526539 RAD21O60216 631 aa11.13□□□□□ -0.63
SLC38A6-209ENST00000526539 LILRA1O75019 489 aa11.13□□□□□ -0.63
SLC38A6-209ENST00000526539 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
SLC38A6-209ENST00000526539 UGGT2Q9NYU1 1516 aa11.13□□□□□ -0.63
SLC38A6-209ENST00000526539 CARMIL2Q6F5E8 1435 aa11.12□□□□□ -0.63
SLC38A6-209ENST00000526539 CCDC125Q86Z20 511 aa11.12□□□□□ -0.63
SLC38A6-209ENST00000526539 CEP126Q9P2H0 1117 aa11.12□□□□□ -0.63
SLC38A6-209ENST00000526539 FMN1Q68DA7 1419 aa11.11□□□□□ -0.63
SLC38A6-209ENST00000526539 UPP2O95045 317 aa11.11□□□□□ -0.63
SLC38A6-209ENST00000526539 C6orf118Q5T5N4 469 aa11.11□□□□□ -0.63
SLC38A6-209ENST00000526539 TSEN34Q9BSV6 310 aaKnown RBP11.11□□□□□ -0.63
SLC38A6-209ENST00000526539 BMP2P12643 396 aa11.1□□□□□ -0.63
SLC38A6-209ENST00000526539 CYLDQ9NQC7 956 aa11.1□□□□□ -0.63
SLC38A6-209ENST00000526539 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
SLC38A6-209ENST00000526539 VPS8Q8N3P4 1428 aa11.09□□□□□ -0.63
SLC38A6-209ENST00000526539 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
SLC38A6-209ENST00000526539 ZNF775Q96BV0 537 aaPredicted RBP11.08□□□□□ -0.64
SLC38A6-209ENST00000526539 AGBL1Q96MI9 1066 aa11.08□□□□□ -0.64
SLC38A6-209ENST00000526539 SAMD9Q5K651 1589 aa11.07□□□□□ -0.64
SLC38A6-209ENST00000526539 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
SLC38A6-209ENST00000526539 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
SLC38A6-209ENST00000526539 PCDHB11Q9Y5F2 797 aa11.07□□□□□ -0.64
SLC38A6-209ENST00000526539 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
SLC38A6-209ENST00000526539 ADH1AP07327 375 aa11.06□□□□□ -0.64
SLC38A6-209ENST00000526539 SOX11P35716 441 aa11.06□□□□□ -0.64
SLC38A6-209ENST00000526539 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
SLC38A6-209ENST00000526539 PHTF2Q8N3S3 785 aa11.06□□□□□ -0.64
SLC38A6-209ENST00000526539 CCDC85AQ96PX6 553 aaPredicted RBP11.06□□□□□ -0.64
SLC38A6-209ENST00000526539 SPINT1O43278 529 aa11.05□□□□□ -0.64
SLC38A6-209ENST00000526539 RELBQ01201 579 aa11.05□□□□□ -0.64
SLC38A6-209ENST00000526539 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
SLC38A6-209ENST00000526539 KDF1Q8NAX2 398 aaPredicted RBP11.05□□□□□ -0.64
SLC38A6-209ENST00000526539 CLUAP1Q96AJ1 413 aa11.05□□□□□ -0.64
SLC38A6-209ENST00000526539 CHD1O14646 1710 aa11.04□□□□□ -0.64
SLC38A6-209ENST00000526539 SCTRP47872 440 aa11.04□□□□□ -0.64
SLC38A6-209ENST00000526539 CC2D2BQ6DHV5 1058 aa11.04□□□□□ -0.64
SLC38A6-209ENST00000526539 SOS2Q07890 1332 aaPredicted RBP11.04□□□□□ -0.64
SLC38A6-209ENST00000526539 SLFNL1Q499Z3 407 aa11.03□□□□□ -0.64
SLC38A6-209ENST00000526539 MAP3K1Q13233 1512 aa11.03□□□□□ -0.64
SLC38A6-209ENST00000526539 CLASP1Q7Z460 1538 aa11.03□□□□□ -0.64
SLC38A6-209ENST00000526539 SOBPA7XYQ1 873 aa11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 TSGA10IPQ3SY00 556 aa11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 CDCA7Q9BWT1 371 aaPredicted RBP11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 ALG2Q9H553 416 aa11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 ZNF395Q9H8N7 513 aaPredicted RBP11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 CHIC2Q9UKJ5 165 aa11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 SHROOM2Q13796 1616 aa11.02□□□□□ -0.65
SLC38A6-209ENST00000526539 ARAP1Q96P48 1450 aa11.01□□□□□ -0.65
SLC38A6-209ENST00000526539 FYCO1Q9BQS8 1478 aa11.01□□□□□ -0.65
SLC38A6-209ENST00000526539 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
SLC38A6-209ENST00000526539 PTGIRP43119 386 aa11.01□□□□□ -0.65
SLC38A6-209ENST00000526539 KIAA0556O60303 1618 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms