RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 TNPO1Q92973 898 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-241ENST00000524127 NSD3Q9BZ95 1437 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 ITSN1Q15811 1721 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 MCM5P33992 734 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 MFAP1P55081 439 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 ZNF445P59923 1031 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 NUCB1Q02818 461 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 KLHL40Q2TBA0 621 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 FTSJ3Q8IY81 847 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 ANP32BQ92688 251 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 ZNF428Q96B54 188 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 CDK19Q9BWU1 502 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 PHF8Q9UPP1 1060 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 ERBB4Q15303 1308 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 EP400Q96L91 3159 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 AKAP12Q02952 1782 aa6.16□□□□□ -1.42
CTNNA1-241ENST00000524127 IPO8O15397 1037 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 ZNF500O60304 480 aaPredicted RBP6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 HSP90AB1P08238 724 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 ALDH1L2Q3SY69 923 aa6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 ATF7IPQ6VMQ6 1270 aa6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 NUDT16Q96DE0 195 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 CABP2Q9NPB3 220 aa6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 ZBTB40Q9NUA8 1239 aa6.15□□□□□ -1.42
CTNNA1-241ENST00000524127 SPATA31A3Q5VYP0 1347 aa6.15□□□□□ -1.43
CTNNA1-241ENST00000524127 NUTM2BA6NNL0 878 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 NUTM2EB1AL46 878 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 K7ELQ4 463 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 NUCB2P80303 420 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 CSPP1Q1MSJ5 1256 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 KRT28Q7Z3Y7 464 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 GAS2L3Q86XJ1 694 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 NUTM2AQ8IVF1 878 aaPredicted RBP6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 CABLES1Q8TDN4 633 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 LRRC59Q96AG4 307 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 GCC1Q96CN9 775 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 NPHP3Q7Z494 1330 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 TNS3Q68CZ2 1445 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 PPIP5K1Q6PFW1 1433 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 CD163L1Q9NR16 1453 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 NRKQ7Z2Y5 1582 aa6.14□□□□□ -1.43
CTNNA1-241ENST00000524127 TRIM27P14373 513 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 NASPP49321 788 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 KIAA1211Q6ZU35 1233 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 CHD1LQ86WJ1 897 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 KLHL34Q8N239 644 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 ARHGAP45Q92619 1136 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 PDLIM2Q96JY6 352 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 KIF2CQ99661 725 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 RNF39Q9H2S5 420 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 CWC22Q9HCG8 908 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 SMC4Q9NTJ3 1288 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 NOL7Q9UMY1 257 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 TNNQ9UQP3 1299 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 SPATA31A6Q5VVP1 1343 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 KIF24Q5T7B8 1368 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 SSH2Q76I76 1423 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 PHRF1Q9P1Y6 1649 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 PIK3C2AO00443 1686 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 MON2Q7Z3U7 1717 aa6.13□□□□□ -1.43
CTNNA1-241ENST00000524127 PLEKHG3A1L390 1219 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 SBNO1A3KN83 1393 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 BAG4O95429 457 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 COL3A1P02461 1466 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 CYP2E1P05181 493 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 ACEP12821 1306 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 MSNP26038 577 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 RABEP1Q15276 862 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 PLCH1Q4KWH8 1693 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 BCL9LQ86UU0 1499 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 NRAPQ86VF7 1730 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 ANKRD36BQ8N2N9 1353 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 SPRYD3Q8NCJ5 442 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 SSH1Q8WYL5 1049 aa6.12□□□□□ -1.43
CTNNA1-241ENST00000524127 SLIT2O94813 1529 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 AFF2P51816 1311 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 DYNC1I1O14576 645 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 ADAMTS2O95450 1211 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 MTHFSP49914 203 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 RIPK4P57078 832 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 EXOSC9Q06265 439 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 ITPRIPQ8IWB1 547 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 SMAP1Q8IYB5 467 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 PLEKHF1Q96S99 279 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 CABP1Q9NZU7 370 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 RRP7AQ9Y3A4 280 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 BRWD3Q6RI45 1802 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 COL18A1P39060 1754 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 RGPD5Q99666 1765 aa6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-241ENST00000524127 GLI3P10071 1580 aa6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 CPSF1Q10570 1443 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 CDC45O75419 566 aa6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 PLEKHG5O94827 1062 aa6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 TMPOP42166 694 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 TMEM57Q8N5G2 664 aa6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 ARXQ96QS3 562 aa6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 BCL2L13Q9BXK5 485 aa6.1□□□□□ -1.43
CTNNA1-241ENST00000524127 CCDC39Q9UFE4 941 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms