RNA–Protein interactions for RNA: ENST00000518855.5

CLINT1-202, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 3,394 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-202ENST00000518855 SLC34A2O95436 690 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 FOXK1P85037 733 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 C14orf93Q9H972 538 aaKnown RBP6.53□□□□□ -1.36
CLINT1-202ENST00000518855 ARHGEF40Q8TER5 1519 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 NALCNQ8IZF0 1738 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 POGZQ7Z3K3 1410 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 DIP2CQ9Y2E4 1556 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 SPAG9O60271 1321 aaKnown RBP6.53□□□□□ -1.36
CLINT1-202ENST00000518855 RGPD1P0DJD0 1748 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 MVPQ14764 893 aaKnown RBP6.53□□□□□ -1.36
CLINT1-202ENST00000518855 ZNF428Q96B54 188 aa6.53□□□□□ -1.36
CLINT1-202ENST00000518855 RWDD1Q9H446 243 aaPredicted RBP6.52□□□□□ -1.37
CLINT1-202ENST00000518855 LRRC7Q96NW7 1537 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 MCM4P33991 863 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 PCDHB15Q9Y5E8 787 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 USP54Q70EL1 1684 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 NCKAP5LQ9HCH0 1330 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 RGL3Q3MIN7 710 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 PLEKHF1Q96S99 279 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 CHMP5Q9NZZ3 219 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 C3P01024 1663 aa6.52□□□□□ -1.37
CLINT1-202ENST00000518855 CDK12Q9NYV4 1490 aaPredicted RBP6.51□□□□□ -1.37
CLINT1-202ENST00000518855 KDM4FA0A1W2PPD8 638 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 MRE11P49959 708 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 TERF1P54274 439 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 POGKQ9P215 609 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 ATP7BP35670 1465 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 FAM135BQ49AJ0 1406 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 DDX11L8A8MPP1 907 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 MYH16Q9H6N6 1097 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 RRAGDQ9NQL2 400 aaPredicted RBP6.51□□□□□ -1.37
CLINT1-202ENST00000518855 RIMS1Q86UR5 1692 aaKnown RBP6.51□□□□□ -1.37
CLINT1-202ENST00000518855 TOPAZ1Q8N9V7 1692 aa6.51□□□□□ -1.37
CLINT1-202ENST00000518855 NEO1Q92859 1461 aa6.5□□□□□ -1.37
CLINT1-202ENST00000518855 XRCC6P12956 609 aaKnown RBP eCLIP6.5□□□□□ -1.37
CLINT1-202ENST00000518855 SLC4A3P48751 1232 aa6.5□□□□□ -1.37
CLINT1-202ENST00000518855 ALDH1L2Q3SY69 923 aa6.5□□□□□ -1.37
CLINT1-202ENST00000518855 UPF2Q9HAU5 1272 aaKnown RBP6.5□□□□□ -1.37
CLINT1-202ENST00000518855 PDZRN3Q9UPQ7 1066 aa6.5□□□□□ -1.37
CLINT1-202ENST00000518855 ADGRF5Q8IZF2 1346 aa6.5□□□□□ -1.37
CLINT1-202ENST00000518855 A0A0U1RQG5 324 aaPredicted RBP6.5□□□□□ -1.37
CLINT1-202ENST00000518855 ANKRD13DQ6ZTN6 518 aa6.5□□□□□ -1.37
CLINT1-202ENST00000518855 CRYBG1Q9Y4K1 1723 aa6.49□□□□□ -1.37
CLINT1-202ENST00000518855 LRRC37A3O60309 1634 aa6.49□□□□□ -1.37
CLINT1-202ENST00000518855 RLBP1P12271 317 aa6.49□□□□□ -1.37
CLINT1-202ENST00000518855 PTCD2Q8WV60 388 aaKnown RBP6.49□□□□□ -1.37
CLINT1-202ENST00000518855 CRISPLD2Q9H0B8 497 aa6.49□□□□□ -1.37
CLINT1-202ENST00000518855 MAP2P11137 1827 aaKnown RBP6.49□□□□□ -1.37
CLINT1-202ENST00000518855 SKOR2Q2VWA4 1001 aaPredicted RBP6.49□□□□□ -1.37
CLINT1-202ENST00000518855 UPF1Q92900 1129 aaKnown RBP eCLIP6.49□□□□□ -1.374e-9■□□□□ 8.2
CLINT1-202ENST00000518855 PPP1R9BQ96SB3 815 aa6.49□□□□□ -1.37
CLINT1-202ENST00000518855 CPSF1Q10570 1443 aaKnown RBP6.48□□□□□ -1.37
CLINT1-202ENST00000518855 RRP9O43818 475 aaKnown RBP6.48□□□□□ -1.37
CLINT1-202ENST00000518855 FGD1P98174 961 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 RAB3GAP1Q15042 981 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 ZKSCAN2Q63HK3 967 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 PANK1Q8TE04 598 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 ARHGAP45Q92619 1136 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 DDX19BQ9UMR2 479 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 GOLGA6L3A6NEY3 463 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 RGS3P49796 1198 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 NUCB1Q02818 461 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 HS1BP3Q53T59 392 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 BMP2KLQ5H9B9 411 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 TCP11L2Q8N4U5 519 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 ZBTB40Q9NUA8 1239 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 CACNA1FO60840 1977 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 NRXN3Q9Y4C0 1643 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 DHX37Q8IY37 1157 aaKnown RBP6.48□□□□□ -1.37
CLINT1-202ENST00000518855 CCDC146Q8IYE0 955 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 IL17RAQ96F46 866 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 COG6Q9Y2V7 657 aa6.48□□□□□ -1.37
CLINT1-202ENST00000518855 SPATA31D1Q6ZQQ2 1576 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 CADPS2Q86UW7 1296 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 CFAP44Q96MT7 982 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 C22orf23Q9BZE7 217 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 FMN2Q9NZ56 1722 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 KIF2CQ99661 725 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 ATAD2Q6PL18 1390 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 DIP2AQ14689 1571 aa6.47□□□□□ -1.37
CLINT1-202ENST00000518855 ALKQ9UM73 1620 aa6.46□□□□□ -1.37
CLINT1-202ENST00000518855 HAP1P54257 671 aaPredicted RBP6.46□□□□□ -1.37
CLINT1-202ENST00000518855 CFAP70Q5T0N1 1121 aa6.46□□□□□ -1.37
CLINT1-202ENST00000518855 DZIP1LQ8IYY4 767 aaKnown RBP6.46□□□□□ -1.37
CLINT1-202ENST00000518855 YTHDC2Q9H6S0 1430 aaKnown RBP6.46□□□□□ -1.37
CLINT1-202ENST00000518855 LSM11P83369 360 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLINT1-202ENST00000518855 TRAK2O60296 914 aa6.46□□□□□ -1.38
CLINT1-202ENST00000518855 CFAP53Q96M91 514 aa6.46□□□□□ -1.38
CLINT1-202ENST00000518855 CHMP4BQ9H444 224 aaKnown RBP6.46□□□□□ -1.38
CLINT1-202ENST00000518855 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.46□□□□□ -1.38
CLINT1-202ENST00000518855 CPS1P31327 1500 aa6.46□□□□□ -1.38
CLINT1-202ENST00000518855 FAM208AQ9UK61 1670 aaKnown RBP6.45□□□□□ -1.38
CLINT1-202ENST00000518855 AGLP35573 1532 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 A0A1W2PP64 1363 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 CYP2E1P05181 493 aaPredicted RBP6.45□□□□□ -1.38
CLINT1-202ENST00000518855 ATF7IPQ6VMQ6 1270 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 XRN1Q8IZH2 1706 aaKnown RBP6.45□□□□□ -1.38
CLINT1-202ENST00000518855 AATKQ6ZMQ8 1374 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 ABCC4O15439 1325 aa6.45□□□□□ -1.38
CLINT1-202ENST00000518855 SENP3-EIF4A1A0A087X0R7 540 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms