RNA–Protein interactions for RNA: ENST00000518682.1

SOD1P3-201, Transcript of superoxide dismutase 1 pseudogene 3, humanhuman

BASIC

Gene SOD1P3, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P3-201ENST00000518682 SHROOM2Q13796 1616 aa6.79□□□□□ -1.32
SOD1P3-201ENST00000518682 DXOO77932 396 aaKnown RBP6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 ATP1A2P50993 1020 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 TAS1R3Q7RTX0 852 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 NPAS4Q8IUM7 802 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 FAM160A2Q8N612 972 aaPredicted RBP6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 PRIMPOLQ96LW4 560 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 CCDC85AQ96PX6 553 aaPredicted RBP6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 NUDT12Q9BQG2 462 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 ARHGAP9Q9BRR9 750 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 PCDHB3Q9Y5E6 796 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 DIP2BQ9P265 1576 aa6.78□□□□□ -1.32
SOD1P3-201ENST00000518682 TK2O00142 265 aa6.77□□□□□ -1.33
SOD1P3-201ENST00000518682 OCLNQ16625 522 aa6.77□□□□□ -1.33
SOD1P3-201ENST00000518682 MSS51Q4VC12 460 aa6.77□□□□□ -1.33
SOD1P3-201ENST00000518682 NBPF14Q5TI25 921 aa6.77□□□□□ -1.33
SOD1P3-201ENST00000518682 SIX5Q8N196 739 aa6.77□□□□□ -1.33
SOD1P3-201ENST00000518682 ZNF687Q8N1G0 1237 aa6.77□□□□□ -1.33
SOD1P3-201ENST00000518682 NUP160Q12769 1436 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 ABCA10Q8WWZ4 1543 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 ABL1P00519 1130 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 MMP16P51512 607 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 SEC13P55735 322 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 ZBTB33Q86T24 672 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 ANO2Q9NQ90 1003 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 CXXC1Q9P0U4 656 aaPredicted RBP6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 EGFL7Q9UHF1 273 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 DOLKQ9UPQ8 538 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 HPS5Q9UPZ3 1129 aa6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 PRG4Q92954 1404 aaPredicted RBP6.76□□□□□ -1.33
SOD1P3-201ENST00000518682 ABCC10Q5T3U5 1492 aa6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 SOWAHBA6NEL2 793 aa6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 SFI1A8K8P3 1242 aa6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 GTF2IP78347 998 aa6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 OXLD1Q5BKU9 147 aa6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 CCDC102BQ68D86 513 aa6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 SH3BP5LQ7L8J4 393 aa6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 DZIP3Q86Y13 1208 aaKnown RBP6.75□□□□□ -1.33
SOD1P3-201ENST00000518682 ICMTO60725 284 aa6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 GIGYF1O75420 1035 aaPredicted RBP6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 PTCRAQ6ISU1 281 aaPredicted RBP6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 ANKK1Q8NFD2 765 aa6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 SPSB2Q99619 263 aa6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 PRDM9Q9NQV7 894 aa6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 TSR3Q9UJK0 312 aaKnown RBP6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 ADCY10Q96PN6 1610 aa6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 HECW2Q9P2P5 1572 aa6.74□□□□□ -1.33
SOD1P3-201ENST00000518682 H3BRB1 525 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 LGR5O75473 907 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 BCAMP50895 628 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 TAGLNQ01995 201 aaKnown RBP6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 ECM1Q16610 540 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 ZNF326Q5BKZ1 582 aaKnown RBP6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 TPCN2Q8NHX9 752 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 UNC93B1Q9H1C4 597 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 TUT1Q9H6E5 874 aaKnown RBP6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 RBM19Q9Y4C8 960 aaKnown RBP6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 PCDHGA11Q9Y5H2 935 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 ADGRL1O94910 1474 aa6.73□□□□□ -1.33
SOD1P3-201ENST00000518682 MAPKBP1O60336 1514 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 HRO43593 1189 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 TCF3P15923 654 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 ADGRD1Q6QNK2 874 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 FBXO33Q7Z6M2 555 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 GLYCTKQ8IVS8 523 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 GTF3C2Q8WUA4 911 aaPredicted RBP6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 CARD14Q9BXL6 1004 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 SEPT3Q9UH03 358 aa6.72□□□□□ -1.33
SOD1P3-201ENST00000518682 GOLGA8CPA6NN73 597 aa6.71□□□□□ -1.34
SOD1P3-201ENST00000518682 EMP3P54852 163 aa6.71□□□□□ -1.34
SOD1P3-201ENST00000518682 SH3RF1Q7Z6J0 888 aa6.71□□□□□ -1.34
SOD1P3-201ENST00000518682 HINFPQ9BQA5 517 aa6.71□□□□□ -1.34
SOD1P3-201ENST00000518682 RUSC2Q8N2Y8 1516 aa6.71□□□□□ -1.34
SOD1P3-201ENST00000518682 FHAD1B1AJZ9 1412 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 MAGEB6P1A0A0J9YX57 407 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 FAM205CA6NFA0 338 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 C21orf2O43822 256 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 VAMP1P23763 118 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 MAPK1P28482 360 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 PSME1Q06323 249 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 CAPN12Q6ZSI9 719 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 CCDC24Q8N4L8 307 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 MARVELD3Q96A59 401 aa6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 DNMT3AQ9Y6K1 912 aaPredicted RBP6.7□□□□□ -1.34
SOD1P3-201ENST00000518682 ST18O60284 1047 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 WEE1P30291 646 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 COPS2P61201 443 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 LSM11P83369 360 aaKnown RBP eCLIP6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 FKBP4Q02790 459 aaKnown RBP eCLIP6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 USP4Q13107 963 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 ERFEQ4G0M1 354 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 RNF20Q5VTR2 975 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 OTUD5Q96G74 571 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 ASB16Q96NS5 453 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 MKNK1Q9BUB5 465 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 DCTN4Q9UJW0 460 aa6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 TTBK1Q5TCY1 1321 aaPredicted RBP6.69□□□□□ -1.34
SOD1P3-201ENST00000518682 PPRC1Q5VV67 1664 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms