RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 ITSN1Q15811 1721 aa13.42□□□□□ -0.26
SH3D19-209ENST00000514013 SBF2Q86WG5 1849 aa13.42□□□□□ -0.26
SH3D19-209ENST00000514013 ST18O60284 1047 aa13.42□□□□□ -0.26
SH3D19-209ENST00000514013 TXNRD1Q16881 649 aa13.42□□□□□ -0.26
SH3D19-209ENST00000514013 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
SH3D19-209ENST00000514013 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
SH3D19-209ENST00000514013 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
SH3D19-209ENST00000514013 SLC15A2Q16348 729 aa13.41□□□□□ -0.26
SH3D19-209ENST00000514013 DDB1Q16531 1140 aa13.41□□□□□ -0.26
SH3D19-209ENST00000514013 KDM2AQ9Y2K7 1162 aa13.41□□□□□ -0.26
SH3D19-209ENST00000514013 ARHGEF28Q8N1W1 1705 aaKnown RBP13.41□□□□□ -0.26
SH3D19-209ENST00000514013 ZBTB7CA1YPR0 619 aa13.4□□□□□ -0.26
SH3D19-209ENST00000514013 MTFR1LQ9H019 292 aa13.4□□□□□ -0.26
SH3D19-209ENST00000514013 STK32BQ9NY57 414 aa13.4□□□□□ -0.26
SH3D19-209ENST00000514013 BCL9O00512 1426 aa13.39□□□□□ -0.27
SH3D19-209ENST00000514013 GOLGB1Q14789 3259 aaKnown RBP13.39□□□□□ -0.27
SH3D19-209ENST00000514013 AATKQ6ZMQ8 1374 aa13.38□□□□□ -0.27
SH3D19-209ENST00000514013 FKBP8Q14318 412 aa13.38□□□□□ -0.27
SH3D19-209ENST00000514013 DCAF11Q8TEB1 546 aa13.38□□□□□ -0.27
SH3D19-209ENST00000514013 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
SH3D19-209ENST00000514013 MAP3K5Q99683 1374 aa13.37□□□□□ -0.27
SH3D19-209ENST00000514013 DCAF8Q5TAQ9 597 aa13.37□□□□□ -0.27
SH3D19-209ENST00000514013 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
SH3D19-209ENST00000514013 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
SH3D19-209ENST00000514013 ARXQ96QS3 562 aa13.37□□□□□ -0.27
SH3D19-209ENST00000514013 SLIT3O75094 1523 aa13.37□□□□□ -0.27
SH3D19-209ENST00000514013 OCEL1Q9H607 264 aa13.36□□□□□ -0.27
SH3D19-209ENST00000514013 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
SH3D19-209ENST00000514013 GIGYF1O75420 1035 aaPredicted RBP13.35□□□□□ -0.27
SH3D19-209ENST00000514013 PYGBP11216 843 aa13.35□□□□□ -0.27
SH3D19-209ENST00000514013 ZNF827Q17R98 1081 aa13.35□□□□□ -0.27
SH3D19-209ENST00000514013 WDR17Q8IZU2 1322 aa13.35□□□□□ -0.27
SH3D19-209ENST00000514013 COL18A1P39060 1754 aa13.35□□□□□ -0.27
SH3D19-209ENST00000514013 PPIP5K1Q6PFW1 1433 aa13.34□□□□□ -0.27
SH3D19-209ENST00000514013 CHD4Q14839 1912 aa13.34□□□□□ -0.27
SH3D19-209ENST00000514013 WNK3Q9BYP7 1800 aa13.34□□□□□ -0.27
SH3D19-209ENST00000514013 SHANK3Q9BYB0 1731 aa13.33□□□□□ -0.27
SH3D19-209ENST00000514013 NLRP6P59044 892 aa13.32□□□□□ -0.28
SH3D19-209ENST00000514013 GPR162Q16538 588 aa13.32□□□□□ -0.28
SH3D19-209ENST00000514013 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
SH3D19-209ENST00000514013 USP6P35125 1406 aa13.31□□□□□ -0.28
SH3D19-209ENST00000514013 CPSF1Q10570 1443 aaKnown RBP13.31□□□□□ -0.28
SH3D19-209ENST00000514013 ARHGEF25Q86VW2 580 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 ACSBG1Q96GR2 724 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
SH3D19-209ENST00000514013 CARD10Q9BWT7 1032 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 LRRC4BQ9NT99 713 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 PCDHB8Q9UN66 801 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 PIK3C2AO00443 1686 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 AKAP12Q02952 1782 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 TNS2Q63HR2 1409 aa13.3□□□□□ -0.28
SH3D19-209ENST00000514013 SRPK2P78362 688 aaKnown RBP13.29□□□□□ -0.28
SH3D19-209ENST00000514013 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
SH3D19-209ENST00000514013 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
SH3D19-209ENST00000514013 NBPF1Q3BBV0 1214 aa13.28□□□□□ -0.28
SH3D19-209ENST00000514013 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
SH3D19-209ENST00000514013 CABP1Q9NZU7 370 aa13.28□□□□□ -0.28
SH3D19-209ENST00000514013 RAB3GAP2Q9H2M9 1393 aa13.28□□□□□ -0.28
SH3D19-209ENST00000514013 EXOC5O00471 708 aa13.27□□□□□ -0.29
SH3D19-209ENST00000514013 SOX12O15370 315 aa13.27□□□□□ -0.29
SH3D19-209ENST00000514013 YBX3P16989 372 aaKnown RBP eCLIP13.27□□□□□ -0.29
SH3D19-209ENST00000514013 TMEM121BQ9BXQ6 578 aaPredicted RBP13.27□□□□□ -0.29
SH3D19-209ENST00000514013 BRD4O60885 1362 aaPredicted RBP13.27□□□□□ -0.29
SH3D19-209ENST00000514013 SNPHO15079 494 aa13.26□□□□□ -0.29
SH3D19-209ENST00000514013 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
SH3D19-209ENST00000514013 TRPM1Q7Z4N2 1603 aa13.26□□□□□ -0.29
SH3D19-209ENST00000514013 PNPLA7Q6ZV29 1317 aa13.25□□□□□ -0.29
SH3D19-209ENST00000514013 STAC3Q96MF2 364 aa13.25□□□□□ -0.29
SH3D19-209ENST00000514013 NFAT5O94916 1531 aa13.24□□□□□ -0.29
SH3D19-209ENST00000514013 ABCC6O95255 1503 aa13.24□□□□□ -0.29
SH3D19-209ENST00000514013 ATP10DQ9P241 1426 aa13.24□□□□□ -0.29
SH3D19-209ENST00000514013 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
SH3D19-209ENST00000514013 RGPD5Q99666 1765 aa13.23□□□□□ -0.29
SH3D19-209ENST00000514013 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
SH3D19-209ENST00000514013 KCNQ4P56696 695 aa13.23□□□□□ -0.29
SH3D19-209ENST00000514013 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
SH3D19-209ENST00000514013 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
SH3D19-209ENST00000514013 BTAF1O14981 1849 aa13.22□□□□□ -0.29
SH3D19-209ENST00000514013 COL24A1Q17RW2 1714 aa13.22□□□□□ -0.29
SH3D19-209ENST00000514013 POLD1P28340 1107 aa13.2□□□□□ -0.3
SH3D19-209ENST00000514013 SLC16A10Q8TF71 515 aa13.2□□□□□ -0.3
SH3D19-209ENST00000514013 ERBB3P21860 1342 aa13.19□□□□□ -0.3
SH3D19-209ENST00000514013 QRICH2Q9H0J4 1663 aa13.19□□□□□ -0.3
SH3D19-209ENST00000514013 KCNH5Q8NCM2 988 aa13.19□□□□□ -0.3
SH3D19-209ENST00000514013 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
SH3D19-209ENST00000514013 ADCY9O60503 1353 aa13.19□□□□□ -0.3
SH3D19-209ENST00000514013 HSPA6P17066 643 aa13.18□□□□□ -0.3
SH3D19-209ENST00000514013 NLRP2Q9NX02 1062 aa13.18□□□□□ -0.3
SH3D19-209ENST00000514013 IL2RBP14784 551 aa13.17□□□□□ -0.3
SH3D19-209ENST00000514013 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
SH3D19-209ENST00000514013 TUBGCP6Q96RT7 1819 aa13.17□□□□□ -0.3
SH3D19-209ENST00000514013 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
SH3D19-209ENST00000514013 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
SH3D19-209ENST00000514013 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
SH3D19-209ENST00000514013 PDCD7Q8N8D1 485 aaKnown RBP13.16□□□□□ -0.3
SH3D19-209ENST00000514013 ZNF526Q8TF50 670 aaPredicted RBP13.16□□□□□ -0.3
SH3D19-209ENST00000514013 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
SH3D19-209ENST00000514013 NSD2O96028 1365 aa13.16□□□□□ -0.3
SH3D19-209ENST00000514013 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms