RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 ZNF518AQ6AHZ1 1483 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 LMTK2Q8IWU2 1503 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 TK2O00142 265 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 TRAK2O60296 914 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 HAP1P54257 671 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 CFAP70Q5T0N1 1121 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 DMRTA1Q5VZB9 504 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 ADGRD1Q6QNK2 874 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 ANP32BQ92688 251 aaKnown RBP6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 SNX21Q969T3 373 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 ZNF428Q96B54 188 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 ADAM33Q9BZ11 813 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 PCDHB15Q9Y5E8 787 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 INO80Q9ULG1 1556 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 EVC2Q86UK5 1308 aa6.22□□□□□ -1.41
HMGB3P16-201ENST00000508037 ZCCHC11Q5TAX3 1644 aaKnown RBP6.21□□□□□ -1.41
HMGB3P16-201ENST00000508037 EFCAB6Q5THR3 1501 aa6.21□□□□□ -1.42
HMGB3P16-201ENST00000508037 SHPRHQ149N8 1683 aa6.21□□□□□ -1.42
HMGB3P16-201ENST00000508037 GOLGA6L22H0YM25 854 aa6.21□□□□□ -1.42
HMGB3P16-201ENST00000508037 DDX12PQ92771 950 aa6.21□□□□□ -1.42
HMGB3P16-201ENST00000508037 TRIM44Q96DX7 344 aaPredicted RBP6.21□□□□□ -1.42
HMGB3P16-201ENST00000508037 SMC4Q9NTJ3 1288 aa6.21□□□□□ -1.42
HMGB3P16-201ENST00000508037 IFT172Q9UG01 1749 aa6.21□□□□□ -1.42
HMGB3P16-201ENST00000508037 ANKRD36BQ8N2N9 1353 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 ADGRB2O60241 1585 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 REREQ9P2R6 1566 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 KIF3BO15066 747 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 RRP9O43818 475 aaKnown RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 HSP90AA1P07900 732 aaKnown RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 XRCC6P12956 609 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 RBM25P49756 843 aaKnown RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 MTHFSP49914 203 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 MFAP1P55081 439 aaKnown RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 CALD1Q05682 793 aaKnown RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 NEUROD2Q15784 382 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 ALDH1L2Q3SY69 923 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 SMC5Q8IY18 1101 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 ARHGEF1Q92888 912 aaKnown RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 RNF166Q96A37 237 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 C14orf93Q9H972 538 aaKnown RBP6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 ADGRF5Q8IZF2 1346 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 ADGRB3O60242 1522 aa6.2□□□□□ -1.42
HMGB3P16-201ENST00000508037 NCOA3Q9Y6Q9 1424 aa6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 TPM2P07951 284 aa6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 HSP90AB1P08238 724 aaKnown RBP6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 U2AF1L5P0DN76 240 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 RLBP1P12271 317 aa6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 U2AF1Q01081 240 aaKnown RBP eCLIP6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 ATF7IPQ6VMQ6 1270 aa6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 ITPRIPQ8IWB1 547 aa6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 NAP1L5Q96NT1 182 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 GRPEL1Q9HAV7 217 aa6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 CHD1O14646 1710 aa6.19□□□□□ -1.42
HMGB3P16-201ENST00000508037 ABCA9Q8IUA7 1624 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 NOS1P29475 1434 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 ZC3H13Q5T200 1668 aaKnown RBP6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 QRICH2Q9H0J4 1663 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 MED14O60244 1454 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 BRPF1P55201 1214 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 NUCB1Q02818 461 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 BMP2KLQ5H9B9 411 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 AFAP1Q8N556 730 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 GCC1Q96CN9 775 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 SLC4A5Q9BY07 1137 aa6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 RRAGDQ9NQL2 400 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 RRP7AQ9Y3A4 280 aaKnown RBP6.18□□□□□ -1.42
HMGB3P16-201ENST00000508037 GRXCR2A6NFK2 248 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 ESPNB1AK53 854 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 PPP1R3GB7ZBB8 358 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 TRIM27P14373 513 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 CCDC173Q0VFZ6 552 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 KCNV2Q8TDN2 545 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 RBM33Q96EV2 1170 aaKnown RBP6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 TERF2IPQ9NYB0 399 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 VPS9D1Q9Y2B5 631 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 MROH1Q8NDA8 1641 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 ATAD2Q6PL18 1390 aa6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 IBTKQ9P2D0 1353 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P16-201ENST00000508037 ZFYVE9O95405 1425 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 ADGRB1O14514 1584 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 HRO43593 1189 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 DDIT3P35638 169 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 TMPOP42166 694 aaKnown RBP6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 TNNT2P45379 298 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 EXOSC9Q06265 439 aaKnown RBP6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 HSP90AA2PQ14568 343 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 RAB3GAP1Q15042 981 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 C6orf132Q5T0Z8 1188 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 CLEC17AQ6ZS10 378 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 CHD1LQ86WJ1 897 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 ARHGAP45Q92619 1136 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 ZBED2Q9BTP6 218 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 BCL2L13Q9BXK5 485 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 GZF1Q9H116 711 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 SLC12A5Q9H2X9 1139 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 ZBTB40Q9NUA8 1239 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 TRAK1Q9UPV9 953 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 PPLO60437 1756 aa6.16□□□□□ -1.42
HMGB3P16-201ENST00000508037 CFAP74Q9C0B2 1584 aa6.15□□□□□ -1.42
HMGB3P16-201ENST00000508037 PPRC1Q5VV67 1664 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms