RNA–Protein interactions for RNA: ENST00000503937.5

SEC31A-213, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC31A, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-213ENST00000503937 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
SEC31A-213ENST00000503937 ZSCAN23Q3MJ62 389 aa9.53□□□□□ -0.88
SEC31A-213ENST00000503937 RBSNQ9H1K0 784 aa9.53□□□□□ -0.88
SEC31A-213ENST00000503937 NAP1L2Q9ULW6 460 aaPredicted RBP9.53□□□□□ -0.88
SEC31A-213ENST00000503937 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.88
SEC31A-213ENST00000503937 MAGI2Q86UL8 1455 aa9.52□□□□□ -0.88
SEC31A-213ENST00000503937 CT47B1P0C2W7 299 aaPredicted RBP9.52□□□□□ -0.89
SEC31A-213ENST00000503937 NBPF1Q3BBV0 1214 aa9.52□□□□□ -0.89
SEC31A-213ENST00000503937 WWC1Q8IX03 1113 aa9.52□□□□□ -0.89
SEC31A-213ENST00000503937 NEO1Q92859 1461 aa9.52□□□□□ -0.89
SEC31A-213ENST00000503937 ABCC1P33527 1531 aa9.52□□□□□ -0.89
SEC31A-213ENST00000503937 SYNMO15061 1565 aa9.52□□□□□ -0.89
SEC31A-213ENST00000503937 SSFA2P28290 1259 aa9.51□□□□□ -0.89
SEC31A-213ENST00000503937 MAP3K9P80192 1104 aa9.51□□□□□ -0.89
SEC31A-213ENST00000503937 TAF7LQ5H9L4 462 aa9.51□□□□□ -0.89
SEC31A-213ENST00000503937 LRSAM1Q6UWE0 723 aa9.51□□□□□ -0.89
SEC31A-213ENST00000503937 CCDC146Q8IYE0 955 aa9.51□□□□□ -0.89
SEC31A-213ENST00000503937 ADGRL1O94910 1474 aa9.51□□□□□ -0.89
SEC31A-213ENST00000503937 SYCP2Q9BX26 1530 aa9.51□□□□□ -0.89
SEC31A-213ENST00000503937 PPRC1Q5VV67 1664 aaKnown RBP9.51□□□□□ -0.89
SEC31A-213ENST00000503937 ZKSCAN2Q63HK3 967 aa9.5□□□□□ -0.89
SEC31A-213ENST00000503937 UPF1Q92900 1129 aaKnown RBP eCLIP9.5□□□□□ -0.89
SEC31A-213ENST00000503937 CWC22Q9HCG8 908 aaKnown RBP9.5□□□□□ -0.89
SEC31A-213ENST00000503937 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
SEC31A-213ENST00000503937 CCDC27Q2M243 656 aa9.5□□□□□ -0.89
SEC31A-213ENST00000503937 OXER1Q8TDS5 423 aa9.5□□□□□ -0.89
SEC31A-213ENST00000503937 FEZ1Q99689 392 aa9.5□□□□□ -0.89
SEC31A-213ENST00000503937 LMBRD1Q9NUN5 540 aa9.5□□□□□ -0.89
SEC31A-213ENST00000503937 ARHGEF5Q12774 1597 aa9.49□□□□□ -0.89
SEC31A-213ENST00000503937 POLR3AO14802 1390 aaPredicted RBP9.49□□□□□ -0.89
SEC31A-213ENST00000503937 CAVIN1Q6NZI2 390 aaKnown RBP9.49□□□□□ -0.89
SEC31A-213ENST00000503937 KIF3AQ9Y496 699 aa9.49□□□□□ -0.89
SEC31A-213ENST00000503937 A2MP01023 1474 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 GPR37O15354 613 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 MBD3O95983 291 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 CYP2E1P05181 493 aaPredicted RBP9.48□□□□□ -0.89
SEC31A-213ENST00000503937 RLBP1P12271 317 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
SEC31A-213ENST00000503937 CBX1P83916 185 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 UVSSAQ2YD98 709 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 BMP2KLQ5H9B9 411 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 DZIP1LQ8IYY4 767 aaKnown RBP9.48□□□□□ -0.89
SEC31A-213ENST00000503937 PIBF1Q8WXW3 757 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 KIF2CQ99661 725 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 DDX19BQ9UMR2 479 aa9.48□□□□□ -0.89
SEC31A-213ENST00000503937 C9orf84Q5VXU9 1444 aa9.47□□□□□ -0.89
SEC31A-213ENST00000503937 GRXCR2A6NFK2 248 aa9.47□□□□□ -0.89
SEC31A-213ENST00000503937 PTMAP06454 111 aaKnown RBP9.47□□□□□ -0.89
SEC31A-213ENST00000503937 GABPB1Q06547 395 aaPredicted RBP9.47□□□□□ -0.89
SEC31A-213ENST00000503937 DNTTIP2Q5QJE6 756 aaKnown RBP9.47□□□□□ -0.89
SEC31A-213ENST00000503937 MCTP1Q6DN14 999 aa9.47□□□□□ -0.89
SEC31A-213ENST00000503937 ZNF710Q8N1W2 664 aa9.47□□□□□ -0.89
SEC31A-213ENST00000503937 RUNDC1Q96C34 613 aa9.47□□□□□ -0.89
SEC31A-213ENST00000503937 AK7Q96M32 723 aa9.47□□□□□ -0.89
SEC31A-213ENST00000503937 YEATS2Q9ULM3 1422 aa9.47□□□□□ -0.89
SEC31A-213ENST00000503937 TSPY4P0CV99 314 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 TSPY10P0CW01 314 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 NUCB1Q02818 461 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 RABEP1Q15276 862 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 RSPH4AQ5TD94 716 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 FTSJ3Q8IY81 847 aaKnown RBP9.46□□□□□ -0.89
SEC31A-213ENST00000503937 PDCL2Q8N4E4 241 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 GAS2L2Q8NHY3 880 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 DIAPH3Q9NSV4 1193 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 ZNF518AQ6AHZ1 1483 aa9.46□□□□□ -0.89
SEC31A-213ENST00000503937 REREQ9P2R6 1566 aa9.46□□□□□ -0.9
SEC31A-213ENST00000503937 FAM193AP78312 1265 aa9.46□□□□□ -0.9
SEC31A-213ENST00000503937 SLC20A2Q08357 652 aa9.46□□□□□ -0.9
SEC31A-213ENST00000503937 NOLC1Q14978 699 aaKnown RBP eCLIP9.46□□□□□ -0.9
SEC31A-213ENST00000503937 KRI1Q8N9T8 703 aaKnown RBP9.46□□□□□ -0.9
SEC31A-213ENST00000503937 FAM184AQ8NB25 1140 aa9.46□□□□□ -0.9
SEC31A-213ENST00000503937 SPTLC3Q9NUV7 552 aa9.46□□□□□ -0.9
SEC31A-213ENST00000503937 OGFRQ9NZT2 677 aa9.46□□□□□ -0.9
SEC31A-213ENST00000503937 POGZQ7Z3K3 1410 aa9.45□□□□□ -0.9
SEC31A-213ENST00000503937 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
SEC31A-213ENST00000503937 TPM3P06753 285 aa9.45□□□□□ -0.9
SEC31A-213ENST00000503937 PTGER2P43116 358 aa9.45□□□□□ -0.9
SEC31A-213ENST00000503937 HNRNPMP52272 730 aaKnown RBP eCLIP9.45□□□□□ -0.98e-7■■■■□ 21
SEC31A-213ENST00000503937 SYCP1Q15431 976 aa9.45□□□□□ -0.9
SEC31A-213ENST00000503937 ATP2B3Q16720 1220 aa9.45□□□□□ -0.9
SEC31A-213ENST00000503937 SYAP1Q96A49 352 aaPredicted RBP9.45□□□□□ -0.9
SEC31A-213ENST00000503937 ARID3AQ99856 593 aa9.45□□□□□ -0.9
SEC31A-213ENST00000503937 CHMP4BQ9H444 224 aaKnown RBP9.45□□□□□ -0.9
SEC31A-213ENST00000503937 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.45□□□□□ -0.93e-7■■■□□ 14.6
SEC31A-213ENST00000503937 RICTORQ6R327 1708 aa9.44□□□□□ -0.9
SEC31A-213ENST00000503937 CCDC66A2RUB6 948 aa9.44□□□□□ -0.9
SEC31A-213ENST00000503937 PHF14O94880 888 aa9.44□□□□□ -0.9
SEC31A-213ENST00000503937 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
SEC31A-213ENST00000503937 OSBPP22059 807 aa9.44□□□□□ -0.9
SEC31A-213ENST00000503937 CHAF1AQ13111 956 aaPredicted RBP9.44□□□□□ -0.9
SEC31A-213ENST00000503937 ANKRD7Q92527 254 aa9.44□□□□□ -0.9
SEC31A-213ENST00000503937 TSPY26PQ9H489 355 aa9.44□□□□□ -0.9
SEC31A-213ENST00000503937 ATP10AO60312 1499 aa9.43□□□□□ -0.9
SEC31A-213ENST00000503937 FKBP5Q13451 457 aaPredicted RBP9.43□□□□□ -0.9
SEC31A-213ENST00000503937 CHD1LQ86WJ1 897 aa9.43□□□□□ -0.9
SEC31A-213ENST00000503937 HECW2Q9P2P5 1572 aa9.43□□□□□ -0.9
SEC31A-213ENST00000503937 SPAG9O60271 1321 aaKnown RBP9.43□□□□□ -0.9
SEC31A-213ENST00000503937 MAST1Q9Y2H9 1570 aa9.42□□□□□ -0.9
SEC31A-213ENST00000503937 TRAPPC8Q9Y2L5 1435 aa9.42□□□□□ -0.9
SEC31A-213ENST00000503937 PRPF40AO75400 957 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms