RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 CD2BP2O95400 341 aaKnown RBP18.53■□□□□ 0.56
SH3TC1-206ENST00000502669 TPRNQ4KMQ1 711 aa18.53■□□□□ 0.56
SH3TC1-206ENST00000502669 PLEKHM2Q8IWE5 1019 aa18.53■□□□□ 0.56
SH3TC1-206ENST00000502669 RILPL2Q969X0 211 aa18.53■□□□□ 0.56
SH3TC1-206ENST00000502669 ABTB2Q8N961 1025 aa18.53■□□□□ 0.56
SH3TC1-206ENST00000502669 CPS1P31327 1500 aa18.53■□□□□ 0.56
SH3TC1-206ENST00000502669 RBM25P49756 843 aaKnown RBP18.52■□□□□ 0.56
SH3TC1-206ENST00000502669 INTS3Q68E01 1043 aaKnown RBP18.52■□□□□ 0.56
SH3TC1-206ENST00000502669 PANK2Q9BZ23 570 aa18.52■□□□□ 0.55
SH3TC1-206ENST00000502669 MAP2P11137 1827 aaKnown RBP18.52■□□□□ 0.55
SH3TC1-206ENST00000502669 GSPT1P15170 499 aaKnown RBP18.51■□□□□ 0.55
SH3TC1-206ENST00000502669 CPSF1Q10570 1443 aaKnown RBP18.51■□□□□ 0.55
SH3TC1-206ENST00000502669 CHL1O00533 1208 aa18.51■□□□□ 0.55
SH3TC1-206ENST00000502669 RPAP2Q8IXW5 612 aaPredicted RBP18.51■□□□□ 0.55
SH3TC1-206ENST00000502669 DCTPP1Q9H773 170 aa18.51■□□□□ 0.55
SH3TC1-206ENST00000502669 MSH6P52701 1360 aa18.5■□□□□ 0.55
SH3TC1-206ENST00000502669 TMEM2Q9UHN6 1383 aa18.5■□□□□ 0.55
SH3TC1-206ENST00000502669 BRPF1P55201 1214 aaPredicted RBP18.5■□□□□ 0.55
SH3TC1-206ENST00000502669 CEP85Q6P2H3 762 aa18.5■□□□□ 0.55
SH3TC1-206ENST00000502669 ANKRD44Q8N8A2 993 aa18.5■□□□□ 0.55
SH3TC1-206ENST00000502669 AATKQ6ZMQ8 1374 aa18.5■□□□□ 0.55
SH3TC1-206ENST00000502669 TTC22Q5TAA0 569 aa18.5■□□□□ 0.55
SH3TC1-206ENST00000502669 CDK12Q9NYV4 1490 aaPredicted RBP18.49■□□□□ 0.55
SH3TC1-206ENST00000502669 SSFA2P28290 1259 aa18.49■□□□□ 0.55
SH3TC1-206ENST00000502669 EYA1Q99502 592 aa18.49■□□□□ 0.55
SH3TC1-206ENST00000502669 SDSP20132 328 aa18.48■□□□□ 0.55
SH3TC1-206ENST00000502669 GAS2L2Q8NHY3 880 aa18.48■□□□□ 0.55
SH3TC1-206ENST00000502669 TRHP20396 242 aaPredicted RBP18.48■□□□□ 0.55
SH3TC1-206ENST00000502669 DDX49Q9Y6V7 483 aaKnown RBP18.48■□□□□ 0.55
SH3TC1-206ENST00000502669 XRCC6P12956 609 aaKnown RBP eCLIP18.47■□□□□ 0.55
SH3TC1-206ENST00000502669 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
SH3TC1-206ENST00000502669 TRIM44Q96DX7 344 aaPredicted RBP18.47■□□□□ 0.55
SH3TC1-206ENST00000502669 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
SH3TC1-206ENST00000502669 GNAI2P04899 355 aa18.46■□□□□ 0.55
SH3TC1-206ENST00000502669 FOXD4L6Q3SYB3 417 aaPredicted RBP18.46■□□□□ 0.55
SH3TC1-206ENST00000502669 FOXD4L3Q6VB84 417 aaPredicted RBP18.46■□□□□ 0.55
SH3TC1-206ENST00000502669 ST18O60284 1047 aa18.46■□□□□ 0.55
SH3TC1-206ENST00000502669 SNX21Q969T3 373 aa18.46■□□□□ 0.55
SH3TC1-206ENST00000502669 MCTP1Q6DN14 999 aa18.46■□□□□ 0.54
SH3TC1-206ENST00000502669 IL1RAPL2Q9NP60 686 aa18.45■□□□□ 0.54
SH3TC1-206ENST00000502669 ANO2Q9NQ90 1003 aa18.45■□□□□ 0.54
SH3TC1-206ENST00000502669 REC8O95072 547 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 OS9Q13438 667 aaPredicted RBP18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 PTPRCP08575 1304 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 KIF20BQ96Q89 1820 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 CCT4P50991 539 aaKnown RBP18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 RABEP1Q15276 862 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 PLEKHG3A1L390 1219 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 FLIIQ13045 1269 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 PIK3R4Q99570 1358 aa18.44■□□□□ 0.54
SH3TC1-206ENST00000502669 GNAT3A8MTJ3 354 aa18.43■□□□□ 0.54
SH3TC1-206ENST00000502669 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
SH3TC1-206ENST00000502669 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
SH3TC1-206ENST00000502669 MAP4K4O95819 1239 aaPredicted RBP18.42■□□□□ 0.54
SH3TC1-206ENST00000502669 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
SH3TC1-206ENST00000502669 NEK4P51957 841 aa18.42■□□□□ 0.54
SH3TC1-206ENST00000502669 THEMISQ8N1K5 641 aaPredicted RBP18.42■□□□□ 0.54
SH3TC1-206ENST00000502669 KIF2CQ99661 725 aa18.42■□□□□ 0.54
SH3TC1-206ENST00000502669 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
SH3TC1-206ENST00000502669 SIRT1Q96EB6 747 aa18.41■□□□□ 0.54
SH3TC1-206ENST00000502669 CIZ1Q9ULV3 898 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-206ENST00000502669 UBTFL1P0CB47 393 aaPredicted RBP18.41■□□□□ 0.54
SH3TC1-206ENST00000502669 GRPEL1Q9HAV7 217 aa18.41■□□□□ 0.54
SH3TC1-206ENST00000502669 LRRFIP2Q9Y608 721 aaKnown RBP18.41■□□□□ 0.54
SH3TC1-206ENST00000502669 RTL1A6NKG5 1358 aa18.41■□□□□ 0.54
SH3TC1-206ENST00000502669 KCNA6P17658 529 aa18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 ERC2O15083 957 aa18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 ANXA1P04083 346 aa18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 MRE11P49959 708 aa18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 LRRCC1Q9C099 1032 aa18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 VIRMAQ69YN4 1812 aaKnown RBP18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 FLT4P35916 1363 aa18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 USP6P35125 1406 aa18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 NAP1L5Q96NT1 182 aaPredicted RBP18.4■□□□□ 0.54
SH3TC1-206ENST00000502669 GNAI3P08754 354 aa18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 PSME1Q06323 249 aa18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 FAM43AQ8N2R8 423 aa18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 USP26Q9BXU7 913 aa18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 PODXL2Q9NZ53 605 aa18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 SURF6O75683 361 aaKnown RBP18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 RAB3GAP1Q15042 981 aa18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 DIP2BQ9P265 1576 aa18.39■□□□□ 0.53
SH3TC1-206ENST00000502669 MCCP23508 829 aa18.38■□□□□ 0.53
SH3TC1-206ENST00000502669 PDE1AP54750 535 aa18.38■□□□□ 0.53
SH3TC1-206ENST00000502669 TEFQ10587 303 aa18.38■□□□□ 0.53
SH3TC1-206ENST00000502669 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
SH3TC1-206ENST00000502669 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
SH3TC1-206ENST00000502669 NUTM1Q86Y26 1132 aa18.38■□□□□ 0.53
SH3TC1-206ENST00000502669 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
SH3TC1-206ENST00000502669 SPATA31D1Q6ZQQ2 1576 aa18.37■□□□□ 0.53
SH3TC1-206ENST00000502669 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
SH3TC1-206ENST00000502669 CDC42BPGQ6DT37 1551 aa18.37■□□□□ 0.53
SH3TC1-206ENST00000502669 PNMA6EA0A0J9YXQ4 647 aa18.37■□□□□ 0.53
SH3TC1-206ENST00000502669 ZGPATQ8N5A5 531 aaKnown RBP18.37■□□□□ 0.53
SH3TC1-206ENST00000502669 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
SH3TC1-206ENST00000502669 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
SH3TC1-206ENST00000502669 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
SH3TC1-206ENST00000502669 MX1P20591 662 aa18.36■□□□□ 0.53
SH3TC1-206ENST00000502669 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms