RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 RGS12O14924 1447 aa17.79■□□□□ 0.44
ABCB1-207ENST00000488737 CRB1P82279 1406 aa17.79■□□□□ 0.44
ABCB1-207ENST00000488737 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
ABCB1-207ENST00000488737 C1orf115Q9H7X2 142 aa17.79■□□□□ 0.44
ABCB1-207ENST00000488737 EIF5BO60841 1220 aaKnown RBP17.78■□□□□ 0.44
ABCB1-207ENST00000488737 SLC26A8Q96RN1 970 aa17.78■□□□□ 0.44
ABCB1-207ENST00000488737 KDRP35968 1356 aa17.78■□□□□ 0.44
ABCB1-207ENST00000488737 PIK3C2AO00443 1686 aa17.78■□□□□ 0.44
ABCB1-207ENST00000488737 ANKARQ7Z5J8 1434 aa17.78■□□□□ 0.44
ABCB1-207ENST00000488737 SNX21Q969T3 373 aa17.77■□□□□ 0.43
ABCB1-207ENST00000488737 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.43
ABCB1-207ENST00000488737 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
ABCB1-207ENST00000488737 NUTM2FA1L443 756 aa17.75■□□□□ 0.43
ABCB1-207ENST00000488737 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
ABCB1-207ENST00000488737 NCOA3Q9Y6Q9 1424 aa17.75■□□□□ 0.43
ABCB1-207ENST00000488737 LRRC37A3O60309 1634 aa17.75■□□□□ 0.43
ABCB1-207ENST00000488737 MCM10Q7L590 875 aa17.75■□□□□ 0.43
ABCB1-207ENST00000488737 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
ABCB1-207ENST00000488737 CHMP5Q9NZZ3 219 aa17.75■□□□□ 0.43
ABCB1-207ENST00000488737 ATP10DQ9P241 1426 aa17.75■□□□□ 0.43
ABCB1-207ENST00000488737 RPAP2Q8IXW5 612 aaPredicted RBP17.74■□□□□ 0.43
ABCB1-207ENST00000488737 ANKRD44Q8N8A2 993 aa17.74■□□□□ 0.43
ABCB1-207ENST00000488737 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
ABCB1-207ENST00000488737 MARF1Q9Y4F3 1742 aaKnown RBP17.73■□□□□ 0.43
ABCB1-207ENST00000488737 NGDNQ8NEJ9 315 aaKnown RBP17.73■□□□□ 0.43
ABCB1-207ENST00000488737 CACNA1FO60840 1977 aa17.72■□□□□ 0.43
ABCB1-207ENST00000488737 HTATSF1O43719 755 aaKnown RBP17.72■□□□□ 0.43
ABCB1-207ENST00000488737 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
ABCB1-207ENST00000488737 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
ABCB1-207ENST00000488737 CDC45O75419 566 aa17.71■□□□□ 0.43
ABCB1-207ENST00000488737 TBC1D9Q6ZT07 1266 aa17.71■□□□□ 0.43
ABCB1-207ENST00000488737 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
ABCB1-207ENST00000488737 KRT24Q2M2I5 525 aa17.7■□□□□ 0.42
ABCB1-207ENST00000488737 RTL1A6NKG5 1358 aa17.7■□□□□ 0.42
ABCB1-207ENST00000488737 MSH6P52701 1360 aa17.7■□□□□ 0.42
ABCB1-207ENST00000488737 AMPHP49418 695 aa17.69■□□□□ 0.42
ABCB1-207ENST00000488737 PLEKHM2Q8IWE5 1019 aa17.69■□□□□ 0.42
ABCB1-207ENST00000488737 CEP85Q6P2H3 762 aa17.69■□□□□ 0.42
ABCB1-207ENST00000488737 DDIT3P35638 169 aa17.68■□□□□ 0.42
ABCB1-207ENST00000488737 EYA1Q99502 592 aa17.68■□□□□ 0.42
ABCB1-207ENST00000488737 TSPYL4Q9UJ04 414 aa17.68■□□□□ 0.42
ABCB1-207ENST00000488737 CIZ1Q9ULV3 898 aaPredicted RBP17.68■□□□□ 0.42
ABCB1-207ENST00000488737 N4BP2Q86UW6 1770 aaPredicted RBP17.68■□□□□ 0.42
ABCB1-207ENST00000488737 FAM208AQ9UK61 1670 aaKnown RBP17.68■□□□□ 0.42
ABCB1-207ENST00000488737 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
ABCB1-207ENST00000488737 MCM4P33991 863 aa17.67■□□□□ 0.42
ABCB1-207ENST00000488737 SOX12O15370 315 aa17.67■□□□□ 0.42
ABCB1-207ENST00000488737 KIF2CQ99661 725 aa17.67■□□□□ 0.42
ABCB1-207ENST00000488737 NWD1Q149M9 1564 aa17.66■□□□□ 0.42
ABCB1-207ENST00000488737 SLC4A2P04920 1241 aa17.66■□□□□ 0.42
ABCB1-207ENST00000488737 GSPT1P15170 499 aaKnown RBP17.66■□□□□ 0.42
ABCB1-207ENST00000488737 CCT4P50991 539 aaKnown RBP17.66■□□□□ 0.42
ABCB1-207ENST00000488737 TTC22Q5TAA0 569 aa17.66■□□□□ 0.42
ABCB1-207ENST00000488737 FOXO3O43524 673 aa17.65■□□□□ 0.42
ABCB1-207ENST00000488737 SPRYD3Q8NCJ5 442 aa17.65■□□□□ 0.42
ABCB1-207ENST00000488737 HMMRO75330 724 aa17.65■□□□□ 0.42
ABCB1-207ENST00000488737 BABAM1Q9NWV8 329 aa17.65■□□□□ 0.42
ABCB1-207ENST00000488737 NLRP6P59044 892 aa17.64■□□□□ 0.41
ABCB1-207ENST00000488737 IL27Q8NEV9 243 aa17.64■□□□□ 0.41
ABCB1-207ENST00000488737 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
ABCB1-207ENST00000488737 HOXC9P31274 260 aa17.63■□□□□ 0.41
ABCB1-207ENST00000488737 MEIS3Q99687 375 aa17.63■□□□□ 0.41
ABCB1-207ENST00000488737 HSP90AB1P08238 724 aaKnown RBP17.63■□□□□ 0.41
ABCB1-207ENST00000488737 GNAT3A8MTJ3 354 aa17.62■□□□□ 0.41
ABCB1-207ENST00000488737 L1TD1Q5T7N2 865 aaKnown RBP17.62■□□□□ 0.41
ABCB1-207ENST00000488737 LTN1O94822 1766 aa17.61■□□□□ 0.41
ABCB1-207ENST00000488737 DDX11L8A8MPP1 907 aa17.61■□□□□ 0.41
ABCB1-207ENST00000488737 KCNA6P17658 529 aa17.61■□□□□ 0.41
ABCB1-207ENST00000488737 STK31Q9BXU1 1019 aa17.61■□□□□ 0.41
ABCB1-207ENST00000488737 BRPF3Q9ULD4 1205 aa17.61■□□□□ 0.41
ABCB1-207ENST00000488737 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
ABCB1-207ENST00000488737 MIS18AQ9NYP9 233 aa17.61■□□□□ 0.41
ABCB1-207ENST00000488737 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
ABCB1-207ENST00000488737 K7ELQ4 463 aaPredicted RBP17.6■□□□□ 0.41
ABCB1-207ENST00000488737 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
ABCB1-207ENST00000488737 LMTK3Q96Q04 1460 aa17.59■□□□□ 0.41
ABCB1-207ENST00000488737 G2E3Q7L622 706 aa17.59■□□□□ 0.41
ABCB1-207ENST00000488737 RABEP1Q15276 862 aa17.58■□□□□ 0.41
ABCB1-207ENST00000488737 CASC1Q6TDU7 716 aa17.58■□□□□ 0.41
ABCB1-207ENST00000488737 HSPA2P54652 639 aa17.58■□□□□ 0.4
ABCB1-207ENST00000488737 ANKLE2Q86XL3 938 aa17.58■□□□□ 0.4
ABCB1-207ENST00000488737 OSBPL3Q9H4L5 887 aa17.58■□□□□ 0.4
ABCB1-207ENST00000488737 PHRF1Q9P1Y6 1649 aaKnown RBP17.57■□□□□ 0.4
ABCB1-207ENST00000488737 GNAI2P04899 355 aa17.57■□□□□ 0.4
ABCB1-207ENST00000488737 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
ABCB1-207ENST00000488737 ABTB2Q8N961 1025 aa17.57■□□□□ 0.4
ABCB1-207ENST00000488737 TUBGCP6Q96RT7 1819 aa17.57■□□□□ 0.4
ABCB1-207ENST00000488737 GNAI3P08754 354 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 PTMSP20962 102 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 RAB3GAP1Q15042 981 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 TRAK2O60296 914 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 FLIIQ13045 1269 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 USP26Q9BXU7 913 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 NFAT5O94916 1531 aa17.56■□□□□ 0.4
ABCB1-207ENST00000488737 F6X3S4 739 aa17.55■□□□□ 0.4
ABCB1-207ENST00000488737 SDSP20132 328 aa17.55■□□□□ 0.4
ABCB1-207ENST00000488737 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
ABCB1-207ENST00000488737 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
ABCB1-207ENST00000488737 GBP4Q96PP9 640 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms