RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 SLC27A5Q9Y2P5 690 aa9.03□□□□□ -0.96
CDHR3-213ENST00000488386 EFCAB6Q5THR3 1501 aa9.03□□□□□ -0.96
CDHR3-213ENST00000488386 STRCP1A6NGW2 1772 aa9.03□□□□□ -0.96
CDHR3-213ENST00000488386 IQGAP1P46940 1657 aa9.03□□□□□ -0.96
CDHR3-213ENST00000488386 LMTK2Q8IWU2 1503 aa9.02□□□□□ -0.97
CDHR3-213ENST00000488386 ITGBL1O95965 494 aaPredicted RBP9.02□□□□□ -0.97
CDHR3-213ENST00000488386 LTKP29376 864 aa9.02□□□□□ -0.97
CDHR3-213ENST00000488386 USP46P62068 366 aa9.02□□□□□ -0.97
CDHR3-213ENST00000488386 PCDHGC3Q9UN70 934 aa9.02□□□□□ -0.97
CDHR3-213ENST00000488386 ARHGAP31Q2M1Z3 1444 aa9.02□□□□□ -0.97
CDHR3-213ENST00000488386 MYO5BQ9ULV0 1848 aa9.01□□□□□ -0.97
CDHR3-213ENST00000488386 UNC13BO14795 1591 aa9.01□□□□□ -0.97
CDHR3-213ENST00000488386 IDI1Q13907 227 aa9.01□□□□□ -0.97
CDHR3-213ENST00000488386 LIMD1Q9UGP4 676 aa9.01□□□□□ -0.97
CDHR3-213ENST00000488386 UBAP1LF5GYI3 381 aa9□□□□□ -0.97
CDHR3-213ENST00000488386 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
CDHR3-213ENST00000488386 RNF19BQ6ZMZ0 732 aa9□□□□□ -0.97
CDHR3-213ENST00000488386 IL21Q9HBE4 155 aa9□□□□□ -0.97
CDHR3-213ENST00000488386 E9PCH4 1651 aa9□□□□□ -0.97
CDHR3-213ENST00000488386 TET3O43151 1660 aa9□□□□□ -0.97
CDHR3-213ENST00000488386 NOS1P29475 1434 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 ZPR1O75312 459 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 FDX1P10109 184 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 TXNDC2Q86VQ3 553 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 SCUBE3Q8IX30 993 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 NKX2-3Q8TAU0 364 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 POLR3EQ9NVU0 708 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 MED14O60244 1454 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 SCAF11Q99590 1463 aaKnown RBP8.99□□□□□ -0.97
CDHR3-213ENST00000488386 GCC2Q8IWJ2 1684 aa8.99□□□□□ -0.97
CDHR3-213ENST00000488386 ARHGAP23Q9P227 1491 aa8.98□□□□□ -0.97
CDHR3-213ENST00000488386 SPTLC1O15269 473 aa8.98□□□□□ -0.97
CDHR3-213ENST00000488386 SH3D19Q5HYK7 790 aa8.98□□□□□ -0.97
CDHR3-213ENST00000488386 SYMPKQ92797 1274 aaKnown RBP8.98□□□□□ -0.97
CDHR3-213ENST00000488386 THAP11Q96EK4 314 aa8.98□□□□□ -0.97
CDHR3-213ENST00000488386 SLIT1O75093 1534 aa8.98□□□□□ -0.97
CDHR3-213ENST00000488386 ROCK1Q13464 1354 aa8.98□□□□□ -0.97
CDHR3-213ENST00000488386 ADGRB3O60242 1522 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 NR1I2O75469 434 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 CLK2P49760 499 aaKnown RBP8.97□□□□□ -0.97
CDHR3-213ENST00000488386 PIP4K2BP78356 416 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 GRIPAP1Q4V328 841 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 NUTM2DQ5VT03 806 aaPredicted RBP8.97□□□□□ -0.97
CDHR3-213ENST00000488386 RIC3Q7Z5B4 369 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 IQGAP3Q86VI3 1631 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 NUP155O75694 1391 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 TMEM2Q9UHN6 1383 aa8.97□□□□□ -0.97
CDHR3-213ENST00000488386 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
CDHR3-213ENST00000488386 IQSEC2Q5JU85 1478 aa8.96□□□□□ -0.97
CDHR3-213ENST00000488386 KCNC4Q03721 635 aa8.96□□□□□ -0.98
CDHR3-213ENST00000488386 DIXDC1Q155Q3 683 aa8.96□□□□□ -0.98
CDHR3-213ENST00000488386 CSPP1Q1MSJ5 1256 aa8.96□□□□□ -0.98
CDHR3-213ENST00000488386 PROCA1Q8NCQ7 364 aaPredicted RBP8.96□□□□□ -0.98
CDHR3-213ENST00000488386 PLA2G2EQ9NZK7 142 aa8.96□□□□□ -0.98
CDHR3-213ENST00000488386 CPS1P31327 1500 aa8.95□□□□□ -0.98
CDHR3-213ENST00000488386 ALKQ9UM73 1620 aa8.95□□□□□ -0.98
CDHR3-213ENST00000488386 QPCTQ16769 361 aa8.95□□□□□ -0.98
CDHR3-213ENST00000488386 BRICD5Q6PL45 260 aa8.95□□□□□ -0.98
CDHR3-213ENST00000488386 SLC26A8Q96RN1 970 aa8.95□□□□□ -0.98
CDHR3-213ENST00000488386 LRRC7Q96NW7 1537 aa8.95□□□□□ -0.98
CDHR3-213ENST00000488386 TMEM131LA2VDJ0 1609 aa8.94□□□□□ -0.98
CDHR3-213ENST00000488386 XIRP1Q702N8 1843 aaKnown RBP8.94□□□□□ -0.98
CDHR3-213ENST00000488386 SKIV2LQ15477 1246 aaKnown RBP8.94□□□□□ -0.98
CDHR3-213ENST00000488386 CABLES1Q8TDN4 633 aa8.94□□□□□ -0.98
CDHR3-213ENST00000488386 RSPH6AQ9H0K4 717 aa8.94□□□□□ -0.98
CDHR3-213ENST00000488386 EID1Q9Y6B2 187 aa8.94□□□□□ -0.98
CDHR3-213ENST00000488386 RPRD2Q5VT52 1461 aaKnown RBP8.94□□□□□ -0.98
CDHR3-213ENST00000488386 GJA5P36382 358 aa8.93□□□□□ -0.98
CDHR3-213ENST00000488386 PRDM9Q9NQV7 894 aa8.93□□□□□ -0.98
CDHR3-213ENST00000488386 KDM5AP29375 1690 aaKnown RBP8.93□□□□□ -0.98
CDHR3-213ENST00000488386 NAIPQ13075 1403 aa8.92□□□□□ -0.98
CDHR3-213ENST00000488386 RIMS2Q9UQ26 1411 aa8.92□□□□□ -0.98
CDHR3-213ENST00000488386 ADH1BP00325 375 aa8.92□□□□□ -0.98
CDHR3-213ENST00000488386 FAM160A2Q8N612 972 aaPredicted RBP8.92□□□□□ -0.98
CDHR3-213ENST00000488386 SPSB2Q99619 263 aa8.92□□□□□ -0.98
CDHR3-213ENST00000488386 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.92□□□□□ -0.98
CDHR3-213ENST00000488386 SLC52A1Q9NWF4 448 aa8.92□□□□□ -0.98
CDHR3-213ENST00000488386 SPHKAPQ2M3C7 1700 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 ZFYVE9O95405 1425 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 DISP3Q9P2K9 1392 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 C6orf229H3BNL8 230 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 PPP1R15AO75807 674 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-213ENST00000488386 FMNL1O95466 1100 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-213ENST00000488386 HRCP23327 699 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 HSPA1LP34931 641 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 Q3C1V9 767 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
CDHR3-213ENST00000488386 SALL2Q9Y467 1007 aaPredicted RBP8.91□□□□□ -0.98
CDHR3-213ENST00000488386 TOM1O60784 492 aa8.9□□□□□ -0.98
CDHR3-213ENST00000488386 TUSC1Q2TAM9 212 aa8.9□□□□□ -0.98
CDHR3-213ENST00000488386 IFFO2Q5TF58 517 aa8.9□□□□□ -0.98
CDHR3-213ENST00000488386 GOPCQ9HD26 462 aa8.9□□□□□ -0.98
CDHR3-213ENST00000488386 CLTCL1P53675 1640 aa8.9□□□□□ -0.99
CDHR3-213ENST00000488386 LILRB3O75022 631 aa8.89□□□□□ -0.99
CDHR3-213ENST00000488386 S1PR4O95977 384 aa8.89□□□□□ -0.99
CDHR3-213ENST00000488386 MTMR2Q13614 643 aa8.89□□□□□ -0.99
CDHR3-213ENST00000488386 RTL5Q5HYW3 569 aaPredicted RBP8.89□□□□□ -0.99
CDHR3-213ENST00000488386 ILDR2Q71H61 639 aa8.89□□□□□ -0.99
CDHR3-213ENST00000488386 USB1Q9BQ65 265 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms