RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	AEBP1	Q8IUX7	1158 aa		12.04	□□□□□ -0.48
ZNF3-215	ENST00000487620	ZGPAT	Q8N5A5	531 aa	Known RBP	12.04	□□□□□ -0.48
ZNF3-215	ENST00000487620	KIF24	Q5T7B8	1368 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	ATP10D	Q9P241	1426 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	WASL	O00401	505 aa	Predicted RBP	12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	ZSCAN23	Q3MJ62	389 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	MCM10	Q7L590	875 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	PPP1R9B	Q96SB3	815 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	LMBRD1	Q9NUN5	540 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	CPSF1	Q10570	1443 aa	Known RBP	12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	GLIPR1L2	Q4G1C9	344 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	MEIS3	Q99687	375 aa		12.03	□□□□□ -0.48
ZNF3-215	ENST00000487620	AATK	Q6ZMQ8	1374 aa		12.02	□□□□□ -0.48
ZNF3-215	ENST00000487620	PRPF40A	O75400	957 aa	Known RBP	12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	MSN	P26038	577 aa	Known RBP	12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	SULT6B1	Q6IMI4	303 aa		12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	ZSCAN30	Q86W11	494 aa		12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	RRP9	O43818	475 aa	Known RBP	12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	CYP2E1	P05181	493 aa	Predicted RBP	12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	TXNDC2	Q86VQ3	553 aa		12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	NUDT16	Q96DE0	195 aa	Known RBP	12.02	□□□□□ -0.49
ZNF3-215	ENST00000487620	CPS1	P31327	1500 aa		12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	RTL1	A6NKG5	1358 aa		12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	REC8	O95072	547 aa		12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	ZNF445	P59923	1031 aa		12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	CWC22	Q9HCG8	908 aa	Known RBP	12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	DLC1	Q96QB1	1528 aa		12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	RGS12	O14924	1447 aa		12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	RBM27	Q9P2N5	1060 aa	Known RBP	12.01	□□□□□ -0.49
ZNF3-215	ENST00000487620	HAP1	P54257	671 aa	Predicted RBP	12	□□□□□ -0.49
ZNF3-215	ENST00000487620	SLC4A10	Q6U841	1118 aa		12	□□□□□ -0.49
ZNF3-215	ENST00000487620	KIAA1211	Q6ZU35	1233 aa		12	□□□□□ -0.49
ZNF3-215	ENST00000487620	CHAMP1	Q96JM3	812 aa		12	□□□□□ -0.49
ZNF3-215	ENST00000487620	SLC4A2	P04920	1241 aa		12	□□□□□ -0.49
ZNF3-215	ENST00000487620	RBSN	Q9H1K0	784 aa		12	□□□□□ -0.49
ZNF3-215	ENST00000487620	ERC2	O15083	957 aa		11.99	□□□□□ -0.49
ZNF3-215	ENST00000487620	PRIM1	P49642	420 aa	Known RBP	11.99	□□□□□ -0.49
ZNF3-215	ENST00000487620	EIF4A2	Q14240	407 aa	Known RBP	11.99	□□□□□ -0.49
ZNF3-215	ENST00000487620	SETD1A	O15047	1707 aa	Known RBP	11.99	□□□□□ -0.49
ZNF3-215	ENST00000487620	GPT2	Q8TD30	523 aa		11.99	□□□□□ -0.49
ZNF3-215	ENST00000487620	MIS18A	Q9NYP9	233 aa		11.99	□□□□□ -0.49
ZNF3-215	ENST00000487620	CCDC61	Q9Y6R9	512 aa		11.99	□□□□□ -0.49
ZNF3-215	ENST00000487620	CHL1	O00533	1208 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	ZDHHC9	Q9Y397	364 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	A2ML1	A8K2U0	1454 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	PTPRC	P08575	1304 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	MON2	Q7Z3U7	1717 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	SOX12	O15370	315 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	TPM2	P07951	284 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	NEK4	P51957	841 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	TSHZ3	Q63HK5	1081 aa		11.98	□□□□□ -0.49
ZNF3-215	ENST00000487620	ITSN1	Q15811	1721 aa		11.97	□□□□□ -0.49
ZNF3-215	ENST00000487620		F6X3S4	739 aa		11.97	□□□□□ -0.49
ZNF3-215	ENST00000487620	HMMR	O75330	724 aa		11.97	□□□□□ -0.49
ZNF3-215	ENST00000487620	MET	P08581	1390 aa		11.97	□□□□□ -0.49
ZNF3-215	ENST00000487620	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
ZNF3-215	ENST00000487620	SYCE3	A1L190	88 aa		11.96	□□□□□ -0.49
ZNF3-215	ENST00000487620	PDE1A	P54750	535 aa		11.96	□□□□□ -0.49
ZNF3-215	ENST00000487620	MLEC	Q14165	292 aa		11.96	□□□□□ -0.49
ZNF3-215	ENST00000487620	NOL8	Q76FK4	1167 aa	Known RBP	11.96	□□□□□ -0.49
ZNF3-215	ENST00000487620	EXOC6B	Q9Y2D4	811 aa		11.96	□□□□□ -0.49
ZNF3-215	ENST00000487620	VSIG10	Q8N0Z9	540 aa		11.96	□□□□□ -0.5
ZNF3-215	ENST00000487620	KIAA0232	Q92628	1395 aa		11.96	□□□□□ -0.5
ZNF3-215	ENST00000487620	C3	P01024	1663 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	NUTM2F	A1L443	756 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	OFD1	O75665	1012 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	G2E3	Q7L622	706 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	TMEM63C	Q9P1W3	806 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	AKAP12	Q02952	1782 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	HSP90AB2P	Q58FF8	381 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	TMX3	Q96JJ7	454 aa		11.95	□□□□□ -0.5
ZNF3-215	ENST00000487620	NRK	Q7Z2Y5	1582 aa		11.94	□□□□□ -0.5
ZNF3-215	ENST00000487620	FOXO3	O43524	673 aa		11.94	□□□□□ -0.5
ZNF3-215	ENST00000487620	LRSAM1	Q6UWE0	723 aa		11.94	□□□□□ -0.5
ZNF3-215	ENST00000487620	RILPL2	Q969X0	211 aa		11.94	□□□□□ -0.5
ZNF3-215	ENST00000487620	TSPYL4	Q9UJ04	414 aa		11.94	□□□□□ -0.5
ZNF3-215	ENST00000487620	PRR36	Q9H6K5	1346 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	TRIM6-TRIM34	B2RNG4	842 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	XPC	Q01831	940 aa	Predicted RBP	11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	RNF214	Q8ND24	703 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	PDLIM2	Q96JY6	352 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	OSBPL3	Q9H4L5	887 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	ANO2	Q9NQ90	1003 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	NOL7	Q9UMY1	257 aa	Known RBP	11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	NRXN3	Q9Y4C0	1643 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	HS1BP3	Q53T59	392 aa		11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	RTF1	Q92541	710 aa	Known RBP	11.93	□□□□□ -0.5
ZNF3-215	ENST00000487620	GNAI2	P04899	355 aa		11.92	□□□□□ -0.5
ZNF3-215	ENST00000487620	CCT4	P50991	539 aa	Known RBP	11.92	□□□□□ -0.5
ZNF3-215	ENST00000487620	ESYT1	Q9BSJ8	1104 aa		11.92	□□□□□ -0.5
ZNF3-215	ENST00000487620	PALD1	Q9ULE6	856 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms