RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ABCC1P33527 1531 aa16.59■□□□□ 0.25
BRAT1-203ENST00000467558 MYO5CQ9NQX4 1742 aa16.59■□□□□ 0.25
BRAT1-203ENST00000467558 PTCD1O75127 700 aaKnown RBP16.59■□□□□ 0.25
BRAT1-203ENST00000467558 DNAAF4Q8WXU2 420 aa16.58■□□□□ 0.25
BRAT1-203ENST00000467558 CEP126Q9P2H0 1117 aa16.58■□□□□ 0.25
BRAT1-203ENST00000467558 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
BRAT1-203ENST00000467558 BECN2A8MW95 431 aa16.58■□□□□ 0.24
BRAT1-203ENST00000467558 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
BRAT1-203ENST00000467558 MARCH6O60337 910 aa16.58■□□□□ 0.24
BRAT1-203ENST00000467558 BICD2Q8TD16 824 aa16.58■□□□□ 0.24
BRAT1-203ENST00000467558 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
BRAT1-203ENST00000467558 ANKRD24Q8TF21 1146 aa16.57■□□□□ 0.24
BRAT1-203ENST00000467558 HYPKQ9NX55 129 aa16.57■□□□□ 0.24
BRAT1-203ENST00000467558 PDCP20941 246 aa16.57■□□□□ 0.24
BRAT1-203ENST00000467558 DMRT2Q9Y5R5 561 aa16.57■□□□□ 0.24
BRAT1-203ENST00000467558 ZFYVE9O95405 1425 aa16.57■□□□□ 0.24
BRAT1-203ENST00000467558 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
BRAT1-203ENST00000467558 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
BRAT1-203ENST00000467558 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
BRAT1-203ENST00000467558 TTC39AQ5SRH9 613 aa16.56■□□□□ 0.24
BRAT1-203ENST00000467558 K7ELQ4 463 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-203ENST00000467558 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.55■□□□□ 0.241e-6■■■■■ 30.3
BRAT1-203ENST00000467558 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
BRAT1-203ENST00000467558 MX1P20591 662 aa16.55■□□□□ 0.24
BRAT1-203ENST00000467558 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
BRAT1-203ENST00000467558 CYP46A1Q9Y6A2 500 aa16.55■□□□□ 0.24
BRAT1-203ENST00000467558 FLT4P35916 1363 aa16.55■□□□□ 0.24
BRAT1-203ENST00000467558 SAFBQ15424 915 aaKnown RBP eCLIP16.55■□□□□ 0.24
BRAT1-203ENST00000467558 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
BRAT1-203ENST00000467558 NPHP3Q7Z494 1330 aa16.55■□□□□ 0.24
BRAT1-203ENST00000467558 KCNA6P17658 529 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 GLRX3O76003 335 aaKnown RBP16.54■□□□□ 0.24
BRAT1-203ENST00000467558 PIP4K2BP78356 416 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 SPATA31E1Q6ZUB1 1445 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 SAMD9LQ8IVG5 1584 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 AEBP1Q8IUX7 1158 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 TRIM34Q9BYJ4 488 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 GNL3LQ9NVN8 582 aaKnown RBP16.54■□□□□ 0.24
BRAT1-203ENST00000467558 MSH6P52701 1360 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 PLEKHH1Q9ULM0 1364 aa16.54■□□□□ 0.24
BRAT1-203ENST00000467558 SKAP1Q86WV1 359 aa16.53■□□□□ 0.24
BRAT1-203ENST00000467558 TRPM2O94759 1503 aa16.53■□□□□ 0.24
BRAT1-203ENST00000467558 MAP4K4O95819 1239 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-203ENST00000467558 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
BRAT1-203ENST00000467558 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
BRAT1-203ENST00000467558 C19orf44Q9H6X5 657 aa16.52■□□□□ 0.24
BRAT1-203ENST00000467558 ANKRD1Q15327 319 aa16.52■□□□□ 0.24
BRAT1-203ENST00000467558 NUTM1Q86Y26 1132 aa16.52■□□□□ 0.23
BRAT1-203ENST00000467558 TRAK2O60296 914 aa16.52■□□□□ 0.23
BRAT1-203ENST00000467558 CCDC73Q6ZRK6 1079 aa16.51■□□□□ 0.23
BRAT1-203ENST00000467558 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
BRAT1-203ENST00000467558 MYD88Q99836 296 aa16.51■□□□□ 0.23
BRAT1-203ENST00000467558 PIK3R4Q99570 1358 aa16.51■□□□□ 0.23
BRAT1-203ENST00000467558 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
BRAT1-203ENST00000467558 MBD3O95983 291 aa16.51■□□□□ 0.23
BRAT1-203ENST00000467558 DHX16O60231 1041 aaKnown RBP16.51■□□□□ 0.23
BRAT1-203ENST00000467558 IGHDP01880 384 aa16.51■□□□□ 0.23
BRAT1-203ENST00000467558 CWC27Q6UX04 472 aaKnown RBP16.51■□□□□ 0.23
BRAT1-203ENST00000467558 HDAC1Q13547 482 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-203ENST00000467558 CLSTN1O94985 981 aa16.5■□□□□ 0.23
BRAT1-203ENST00000467558 ZSCAN25Q6NSZ9 544 aa16.5■□□□□ 0.23
BRAT1-203ENST00000467558 NCKAP5LQ9HCH0 1330 aa16.5■□□□□ 0.23
BRAT1-203ENST00000467558 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-203ENST00000467558 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
BRAT1-203ENST00000467558 CFAP74Q9C0B2 1584 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 CREBRFQ8IUR6 639 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 FKBP4Q02790 459 aaKnown RBP eCLIP16.49■□□□□ 0.23
BRAT1-203ENST00000467558 HOOK1Q9UJC3 728 aaKnown RBP16.49■□□□□ 0.23
BRAT1-203ENST00000467558 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 PI4KAP2A4QPH2 592 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 VPS53Q5VIR6 699 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 PI4KAP1Q8N8J0 262 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 PTPRTO14522 1441 aa16.49■□□□□ 0.23
BRAT1-203ENST00000467558 BLOC1S2Q6QNY1 142 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 PHACTR3Q96KR7 559 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 TTC37Q6PGP7 1564 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 EDC4Q6P2E9 1401 aaKnown RBP16.48■□□□□ 0.23
BRAT1-203ENST00000467558 TPD52L1Q16890 204 aaPredicted RBP16.48■□□□□ 0.23
BRAT1-203ENST00000467558 BMP2KLQ5H9B9 411 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 EXOC5O00471 708 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 FOSBP53539 338 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 XBP1P17861 261 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 ZFYVE16Q7Z3T8 1539 aa16.48■□□□□ 0.23
BRAT1-203ENST00000467558 YEATS2Q9ULM3 1422 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 RAD21O60216 631 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
BRAT1-203ENST00000467558 AKAP4Q5JQC9 854 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 NACAP1Q9BZK3 213 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 MLH3Q9UHC1 1453 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 KRT32Q14532 448 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 SASS6Q6UVJ0 657 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 TEX13AQ9BXU3 409 aaPredicted RBP16.47■□□□□ 0.23
BRAT1-203ENST00000467558 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 PREX2Q70Z35 1606 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 MRPL50Q8N5N7 158 aaKnown RBP16.47■□□□□ 0.23
BRAT1-203ENST00000467558 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
BRAT1-203ENST00000467558 SNRPA1P09661 255 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms