RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 NSFL1CQ9UNZ2 370 aaKnown RBP16.55■□□□□ 0.24
MMP11-206ENST00000465385 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
MMP11-206ENST00000465385 GPT2Q8TD30 523 aa16.55■□□□□ 0.24
MMP11-206ENST00000465385 ADGRB2O60241 1585 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 UQCRHLA0A096LP55 91 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 PLEKHG5O94827 1062 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 UQCRHP07919 91 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 ANKRD44Q8N8A2 993 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 LARP6Q9BRS8 491 aaKnown RBP16.54■□□□□ 0.24
MMP11-206ENST00000465385 TRHP20396 242 aaPredicted RBP16.54■□□□□ 0.24
MMP11-206ENST00000465385 IL13P35225 146 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 TMEM63CQ9P1W3 806 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 MSH6P52701 1360 aa16.54■□□□□ 0.24
MMP11-206ENST00000465385 MYO3AQ8NEV4 1616 aa16.53■□□□□ 0.24
MMP11-206ENST00000465385 MAP4K4O95819 1239 aaPredicted RBP16.53■□□□□ 0.24
MMP11-206ENST00000465385 YTHDC2Q9H6S0 1430 aaKnown RBP16.53■□□□□ 0.24
MMP11-206ENST00000465385 MCCP23508 829 aa16.53■□□□□ 0.24
MMP11-206ENST00000465385 PPP1R9BQ96SB3 815 aa16.53■□□□□ 0.24
MMP11-206ENST00000465385 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
MMP11-206ENST00000465385 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
MMP11-206ENST00000465385 OFD1O75665 1012 aa16.52■□□□□ 0.23
MMP11-206ENST00000465385 RPAP2Q8IXW5 612 aaPredicted RBP16.52■□□□□ 0.23
MMP11-206ENST00000465385 TMX3Q96JJ7 454 aa16.52■□□□□ 0.23
MMP11-206ENST00000465385 TSPYL4Q9UJ04 414 aa16.51■□□□□ 0.23
MMP11-206ENST00000465385 COL3A1P02461 1466 aaPredicted RBP16.51■□□□□ 0.23
MMP11-206ENST00000465385 CFAP74Q9C0B2 1584 aa16.51■□□□□ 0.23
MMP11-206ENST00000465385 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
MMP11-206ENST00000465385 FKBP5Q13451 457 aaPredicted RBP16.51■□□□□ 0.23
MMP11-206ENST00000465385 CAMSAP1Q5T5Y3 1602 aa16.51■□□□□ 0.23
MMP11-206ENST00000465385 ZNF445P59923 1031 aa16.5■□□□□ 0.23
MMP11-206ENST00000465385 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
MMP11-206ENST00000465385 G2E3Q7L622 706 aa16.5■□□□□ 0.23
MMP11-206ENST00000465385 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
MMP11-206ENST00000465385 KIDINS220Q9ULH0 1771 aa16.49■□□□□ 0.23
MMP11-206ENST00000465385 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
MMP11-206ENST00000465385 ZNF830Q96NB3 372 aaPredicted RBP16.49■□□□□ 0.23
MMP11-206ENST00000465385 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
MMP11-206ENST00000465385 POGZQ7Z3K3 1410 aa16.49■□□□□ 0.23
MMP11-206ENST00000465385 HAP1P54257 671 aaPredicted RBP16.49■□□□□ 0.23
MMP11-206ENST00000465385 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
MMP11-206ENST00000465385 FOXO3O43524 673 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 PDE1AP54750 535 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 ZDHHC9Q9Y397 364 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 ZC3H13Q5T200 1668 aaKnown RBP16.48■□□□□ 0.23
MMP11-206ENST00000465385 ARAP3Q8WWN8 1544 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 PPLO60437 1756 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 IFT172Q9UG01 1749 aa16.48■□□□□ 0.23
MMP11-206ENST00000465385 ZNF853P0CG23 659 aa16.47■□□□□ 0.23
MMP11-206ENST00000465385 LRSAM1Q6UWE0 723 aa16.47■□□□□ 0.23
MMP11-206ENST00000465385 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
MMP11-206ENST00000465385 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
MMP11-206ENST00000465385 MED14O60244 1454 aa16.47■□□□□ 0.23
MMP11-206ENST00000465385 HSP90AB2PQ58FF8 381 aa16.47■□□□□ 0.23
MMP11-206ENST00000465385 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
MMP11-206ENST00000465385 PNPLA6Q8IY17 1366 aa16.47■□□□□ 0.23
MMP11-206ENST00000465385 ABCC3O15438 1527 aa16.46■□□□□ 0.23
MMP11-206ENST00000465385 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
MMP11-206ENST00000465385 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
MMP11-206ENST00000465385 LTV1Q96GA3 475 aaPredicted RBP16.46■□□□□ 0.23
MMP11-206ENST00000465385 CCDC39Q9UFE4 941 aa16.46■□□□□ 0.23
MMP11-206ENST00000465385 SYAP1Q96A49 352 aaPredicted RBP16.46■□□□□ 0.23
MMP11-206ENST00000465385 MBD3O95983 291 aa16.45■□□□□ 0.22
MMP11-206ENST00000465385 ZKSCAN5Q9Y2L8 839 aa16.45■□□□□ 0.22
MMP11-206ENST00000465385 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
MMP11-206ENST00000465385 EIF4A2Q14240 407 aaKnown RBP16.45■□□□□ 0.22
MMP11-206ENST00000465385 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
MMP11-206ENST00000465385 RTL1A6NKG5 1358 aa16.45■□□□□ 0.22
MMP11-206ENST00000465385 NUTM1Q86Y26 1132 aa16.45■□□□□ 0.22
MMP11-206ENST00000465385 ARHGEF28Q8N1W1 1705 aaKnown RBP16.45■□□□□ 0.22
MMP11-206ENST00000465385 FIBPO43427 364 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 GNAI2P04899 355 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 LRRCC1Q9C099 1032 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 PRDM10Q9NQV6 1147 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 USP25Q9UHP3 1055 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 USP32Q8NFA0 1604 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 GADD45BO75293 160 aaPredicted RBP16.44■□□□□ 0.22
MMP11-206ENST00000465385 MX1P20591 662 aa16.44■□□□□ 0.22
MMP11-206ENST00000465385 C14orf37Q86TY3 774 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 YEATS2Q9ULM3 1422 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 NEURL4Q96JN8 1562 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 DDX54Q8TDD1 881 aaKnown RBP16.43■□□□□ 0.22
MMP11-206ENST00000465385 TSC1Q92574 1164 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 FAM177BA6PVY3 158 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 CYP2E1P05181 493 aaPredicted RBP16.43■□□□□ 0.22
MMP11-206ENST00000465385 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 OS9Q13438 667 aaPredicted RBP16.43■□□□□ 0.22
MMP11-206ENST00000465385 C17orf53Q8N3J3 647 aaPredicted RBP16.43■□□□□ 0.22
MMP11-206ENST00000465385 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
MMP11-206ENST00000465385 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
MMP11-206ENST00000465385 ESYT1Q9BSJ8 1104 aa16.42■□□□□ 0.22
MMP11-206ENST00000465385 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
MMP11-206ENST00000465385 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
MMP11-206ENST00000465385 PTPRMP28827 1452 aa16.41■□□□□ 0.22
MMP11-206ENST00000465385 CSPP1Q1MSJ5 1256 aa16.41■□□□□ 0.22
MMP11-206ENST00000465385 CLEC17AQ6ZS10 378 aa16.41■□□□□ 0.22
MMP11-206ENST00000465385 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms