RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZSCAN23Q3MJ62 389 aa14.48□□□□□ -0.09
PDZRN3-203ENST00000462146 MSH6P52701 1360 aa14.48□□□□□ -0.09
PDZRN3-203ENST00000462146 CDK12Q9NYV4 1490 aaPredicted RBP14.47□□□□□ -0.09
PDZRN3-203ENST00000462146 IBTKQ9P2D0 1353 aaPredicted RBP14.47□□□□□ -0.09
PDZRN3-203ENST00000462146 CPS1P31327 1500 aa14.47□□□□□ -0.09
PDZRN3-203ENST00000462146 RRP9O43818 475 aaKnown RBP14.47□□□□□ -0.09
PDZRN3-203ENST00000462146 AEBP1Q8IUX7 1158 aa14.47□□□□□ -0.09
PDZRN3-203ENST00000462146 RBSNQ9H1K0 784 aa14.47□□□□□ -0.09
PDZRN3-203ENST00000462146 CEP85Q6P2H3 762 aa14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 KIAA1211Q6ZU35 1233 aa14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 ANKRD44Q8N8A2 993 aa14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 ZDHHC9Q9Y397 364 aa14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 FOXD4L5Q5VV16 416 aaPredicted RBP14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 INTS3Q68E01 1043 aaKnown RBP14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 ZSCAN30Q86W11 494 aa14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 GPT2Q8TD30 523 aa14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 FOXD4L4Q8WXT5 416 aaPredicted RBP14.46□□□□□ -0.09
PDZRN3-203ENST00000462146 SETD1AO15047 1707 aaKnown RBP14.46□□□□□ -0.1
PDZRN3-203ENST00000462146 PRPF40AO75400 957 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 MEIS3Q99687 375 aa14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 PRIM1P49642 420 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 ZNF445P59923 1031 aa14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 VSIG10Q8N0Z9 540 aa14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 NUCB2P80303 420 aa14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 NSFL1CQ9UNZ2 370 aaKnown RBP14.45□□□□□ -0.1
PDZRN3-203ENST00000462146 MCM10Q7L590 875 aa14.44□□□□□ -0.1
PDZRN3-203ENST00000462146 CPSF1Q10570 1443 aaKnown RBP14.44□□□□□ -0.1
PDZRN3-203ENST00000462146 RTL1A6NKG5 1358 aa14.44□□□□□ -0.1
PDZRN3-203ENST00000462146 EDC4Q6P2E9 1401 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-203ENST00000462146 ANP32BQ92688 251 aaKnown RBP14.43□□□□□ -0.1
PDZRN3-203ENST00000462146 LMOD3Q0VAK6 560 aa14.43□□□□□ -0.1
PDZRN3-203ENST00000462146 TSHZ3Q63HK5 1081 aa14.43□□□□□ -0.1
PDZRN3-203ENST00000462146 KIF24Q5T7B8 1368 aa14.42□□□□□ -0.1
PDZRN3-203ENST00000462146 MSNP26038 577 aaKnown RBP14.42□□□□□ -0.1
PDZRN3-203ENST00000462146 MON2Q7Z3U7 1717 aa14.42□□□□□ -0.1
PDZRN3-203ENST00000462146 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.42□□□□□ -0.1
PDZRN3-203ENST00000462146 GLIPR1L2Q4G1C9 344 aa14.41□□□□□ -0.1
PDZRN3-203ENST00000462146 COG3Q96JB2 828 aa14.41□□□□□ -0.1
PDZRN3-203ENST00000462146 TMEM63CQ9P1W3 806 aa14.41□□□□□ -0.1
PDZRN3-203ENST00000462146 ST18O60284 1047 aa14.41□□□□□ -0.1
PDZRN3-203ENST00000462146 TPM2P07951 284 aa14.41□□□□□ -0.1
PDZRN3-203ENST00000462146 SULT6B1Q6IMI4 303 aa14.41□□□□□ -0.1
PDZRN3-203ENST00000462146 MIS18AQ9NYP9 233 aa14.41□□□□□ -0.1
PDZRN3-203ENST00000462146 DLC1Q96QB1 1528 aa14.4□□□□□ -0.1
PDZRN3-203ENST00000462146 WASLO00401 505 aaPredicted RBP14.4□□□□□ -0.1
PDZRN3-203ENST00000462146 RPAP2Q8IXW5 612 aaPredicted RBP14.4□□□□□ -0.1
PDZRN3-203ENST00000462146 SYCE3A1L190 88 aa14.4□□□□□ -0.1
PDZRN3-203ENST00000462146 OFD1O75665 1012 aa14.4□□□□□ -0.1
PDZRN3-203ENST00000462146 AATKQ6ZMQ8 1374 aa14.4□□□□□ -0.1
PDZRN3-203ENST00000462146 C3P01024 1663 aa14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 F6X3S4 739 aa14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 NOL8Q76FK4 1167 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 TUBGCP6Q96RT7 1819 aa14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 XPCQ01831 940 aaPredicted RBP14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 TXNDC2Q86VQ3 553 aa14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 RIMS1Q86UR5 1692 aaKnown RBP14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 ITSN1Q15811 1721 aa14.39□□□□□ -0.11
PDZRN3-203ENST00000462146 EIF4A2Q14240 407 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 CASC1Q6TDU7 716 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 G2E3Q7L622 706 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 NUDT16Q96DE0 195 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 CWC22Q9HCG8 908 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 AKAP12Q02952 1782 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 ERC2O15083 957 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 RBM10P98175 930 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 PDLIM2Q96JY6 352 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 ZMYND15Q9H091 742 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 SLC4A10Q6U841 1118 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 NRKQ7Z2Y5 1582 aa14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 R3HCC1Q9Y3T6 440 aaKnown RBP14.38□□□□□ -0.11
PDZRN3-203ENST00000462146 CHL1O00533 1208 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 NRXN3Q9Y4C0 1643 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 REC8O95072 547 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 NEK4P51957 841 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 RNF214Q8ND24 703 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 PALD1Q9ULE6 856 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 A2ML1A8K2U0 1454 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 TCHHQ07283 1943 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 METP08581 1390 aa14.37□□□□□ -0.11
PDZRN3-203ENST00000462146 PDE1AP54750 535 aa14.36□□□□□ -0.11
PDZRN3-203ENST00000462146 TMX3Q96JJ7 454 aa14.36□□□□□ -0.11
PDZRN3-203ENST00000462146 FOXD4L6Q3SYB3 417 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-203ENST00000462146 FOXD4L3Q6VB84 417 aaPredicted RBP14.36□□□□□ -0.11
PDZRN3-203ENST00000462146 NOL7Q9UMY1 257 aaKnown RBP14.36□□□□□ -0.11
PDZRN3-203ENST00000462146 SOX12O15370 315 aa14.35□□□□□ -0.11
PDZRN3-203ENST00000462146 LRSAM1Q6UWE0 723 aa14.35□□□□□ -0.11
PDZRN3-203ENST00000462146 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.35□□□□□ -0.11
PDZRN3-203ENST00000462146 PEAK1Q9H792 1746 aa14.35□□□□□ -0.11
PDZRN3-203ENST00000462146 FOXO3O43524 673 aa14.35□□□□□ -0.11
PDZRN3-203ENST00000462146 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.35□□□□□ -0.11
PDZRN3-203ENST00000462146 PRR36Q9H6K5 1346 aa14.35□□□□□ -0.11
PDZRN3-203ENST00000462146 PTPRCP08575 1304 aa14.34□□□□□ -0.11
PDZRN3-203ENST00000462146 HSP90AB2PQ58FF8 381 aa14.34□□□□□ -0.11
PDZRN3-203ENST00000462146 PKNOX2Q96KN3 472 aa14.34□□□□□ -0.11
PDZRN3-203ENST00000462146 NUTM2FA1L443 756 aa14.33□□□□□ -0.12
PDZRN3-203ENST00000462146 GDPD2Q9HCC8 539 aa14.33□□□□□ -0.12
PDZRN3-203ENST00000462146 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms