RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 DDX46Q7L014 1031 aaKnown RBP12.53□□□□□ -0.4
EPB41-208ENST00000460378 SPATA31D1Q6ZQQ2 1576 aa12.53□□□□□ -0.4
EPB41-208ENST00000460378 HOXC9P31274 260 aa12.53□□□□□ -0.4
EPB41-208ENST00000460378 ADAMTSL3P82987 1691 aa12.52□□□□□ -0.4
EPB41-208ENST00000460378 MYL6BP14649 208 aa12.52□□□□□ -0.41
EPB41-208ENST00000460378 DDRGK1Q96HY6 314 aa12.51□□□□□ -0.41
EPB41-208ENST00000460378 AMOTL1Q8IY63 956 aa12.51□□□□□ -0.41
EPB41-208ENST00000460378 TET3O43151 1660 aa12.51□□□□□ -0.41
EPB41-208ENST00000460378 C6orf229H3BNL8 230 aa12.51□□□□□ -0.41
EPB41-208ENST00000460378 GNAI1P63096 354 aa12.51□□□□□ -0.41
EPB41-208ENST00000460378 GIGYF1O75420 1035 aaPredicted RBP12.5□□□□□ -0.41
EPB41-208ENST00000460378 PDE6BP35913 854 aa12.5□□□□□ -0.41
EPB41-208ENST00000460378 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
EPB41-208ENST00000460378 BARGINQ6ZT62 677 aa12.5□□□□□ -0.41
EPB41-208ENST00000460378 MPHOSPH8Q99549 860 aa12.5□□□□□ -0.41
EPB41-208ENST00000460378 EAPPQ56P03 285 aaPredicted RBP12.5□□□□□ -0.41
EPB41-208ENST00000460378 CNBD1Q8NA66 436 aa12.5□□□□□ -0.41
EPB41-208ENST00000460378 SYNMO15061 1565 aa12.49□□□□□ -0.41
EPB41-208ENST00000460378 SPATA31A5Q5VU36 1347 aa12.49□□□□□ -0.41
EPB41-208ENST00000460378 SPATA31A7Q8IWB4 1347 aa12.49□□□□□ -0.41
EPB41-208ENST00000460378 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
EPB41-208ENST00000460378 HSP90AB2PQ58FF8 381 aa12.49□□□□□ -0.41
EPB41-208ENST00000460378 GJA3Q9Y6H8 435 aa12.49□□□□□ -0.41
EPB41-208ENST00000460378 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
EPB41-208ENST00000460378 ZFYVE9O95405 1425 aa12.49□□□□□ -0.41
EPB41-208ENST00000460378 ANKIB1Q9P2G1 1089 aa12.49□□□□□ -0.41
EPB41-208ENST00000460378 OVOS2A0A0G2JMS6 1433 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 OVOS2A0A0J9YW53 1432 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 OVOS2Q6IE36 1432 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 DALRD3Q5D0E6 543 aaKnown RBP12.48□□□□□ -0.41
EPB41-208ENST00000460378 IGHMBP2P38935 993 aaKnown RBP12.48□□□□□ -0.41
EPB41-208ENST00000460378 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
EPB41-208ENST00000460378 CCDC146Q8IYE0 955 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 MTFR1LQ9H019 292 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 ILDR2Q71H61 639 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 KDM2BQ8NHM5 1336 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 MYO3AQ8NEV4 1616 aa12.48□□□□□ -0.41
EPB41-208ENST00000460378 FRAT1Q92837 279 aaPredicted RBP12.47□□□□□ -0.41
EPB41-208ENST00000460378 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 LMTK2Q8IWU2 1503 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 AKAP4Q5JQC9 854 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 CCDC30Q5VVM6 783 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 PDZRN3Q9UPQ7 1066 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 SUPT20HQ8NEM7 779 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 IQGAP1P46940 1657 aa12.47□□□□□ -0.41
EPB41-208ENST00000460378 SNRPA1P09661 255 aaKnown RBP12.47□□□□□ -0.41
EPB41-208ENST00000460378 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
EPB41-208ENST00000460378 HDGFL1Q5TGJ6 251 aa12.46□□□□□ -0.41
EPB41-208ENST00000460378 CNKSR1Q969H4 720 aa12.46□□□□□ -0.41
EPB41-208ENST00000460378 MAP3K19Q56UN5 1328 aa12.46□□□□□ -0.41
EPB41-208ENST00000460378 DIP2AQ14689 1571 aa12.46□□□□□ -0.41
EPB41-208ENST00000460378 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
EPB41-208ENST00000460378 TRMT112Q9UI30 125 aaKnown RBP12.46□□□□□ -0.41
EPB41-208ENST00000460378 C3P01024 1663 aa12.46□□□□□ -0.41
EPB41-208ENST00000460378 MYO1BO43795 1136 aa12.46□□□□□ -0.42
EPB41-208ENST00000460378 HDAC9Q9UKV0 1011 aa12.46□□□□□ -0.42
EPB41-208ENST00000460378 NSD2O96028 1365 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 SLC15A2Q16348 729 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 EYA3Q99504 573 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
EPB41-208ENST00000460378 PLIN1O60240 522 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 TAF7Q15545 349 aaPredicted RBP12.45□□□□□ -0.42
EPB41-208ENST00000460378 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 NIP7Q9Y221 180 aaKnown RBP eCLIP12.45□□□□□ -0.42
EPB41-208ENST00000460378 ANKRD36BQ8N2N9 1353 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
EPB41-208ENST00000460378 SMC4Q9NTJ3 1288 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 PIK3C2BO00750 1634 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 CEP152O94986 1710 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 FRMPD1Q5SYB0 1578 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
EPB41-208ENST00000460378 DZIP3Q86Y13 1208 aaKnown RBP12.45□□□□□ -0.42
EPB41-208ENST00000460378 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 OGFOD1Q8N543 542 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 CNNM1Q9NRU3 951 aa12.45□□□□□ -0.42
EPB41-208ENST00000460378 MED14O60244 1454 aa12.44□□□□□ -0.42
EPB41-208ENST00000460378 CRB1P82279 1406 aa12.44□□□□□ -0.42
EPB41-208ENST00000460378 ALDH1B1P30837 517 aa12.44□□□□□ -0.42
EPB41-208ENST00000460378 RUNDC1Q96C34 613 aa12.44□□□□□ -0.42
EPB41-208ENST00000460378 ERVV-2B6SEH9 535 aa12.44□□□□□ -0.42
EPB41-208ENST00000460378 ZNF408Q9H9D4 720 aa12.43□□□□□ -0.42
EPB41-208ENST00000460378 LOC102724428A0A0B4J2F2 783 aa12.43□□□□□ -0.42
EPB41-208ENST00000460378 SIK1P57059 783 aa12.43□□□□□ -0.42
EPB41-208ENST00000460378 LARGE2Q8N3Y3 721 aa12.43□□□□□ -0.42
EPB41-208ENST00000460378 KIF1BO60333 1816 aa12.43□□□□□ -0.42
EPB41-208ENST00000460378 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.43□□□□□ -0.42
EPB41-208ENST00000460378 FYB1O15117 783 aa12.42□□□□□ -0.42
EPB41-208ENST00000460378 NIM1KQ8IY84 436 aa12.42□□□□□ -0.42
EPB41-208ENST00000460378 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
EPB41-208ENST00000460378 SLIT1O75093 1534 aa12.42□□□□□ -0.42
EPB41-208ENST00000460378 MST1RQ04912 1400 aa12.42□□□□□ -0.42
EPB41-208ENST00000460378 ADAMTS13Q76LX8 1427 aa12.42□□□□□ -0.42
EPB41-208ENST00000460378 MROH2AA6NES4 1674 aa12.41□□□□□ -0.42
EPB41-208ENST00000460378 GPTP24298 496 aa12.41□□□□□ -0.42
EPB41-208ENST00000460378 MYBBP1AQ9BQG0 1328 aaKnown RBP12.41□□□□□ -0.42
EPB41-208ENST00000460378 AATKQ6ZMQ8 1374 aa12.41□□□□□ -0.42
EPB41-208ENST00000460378 WWC1Q8IX03 1113 aa12.41□□□□□ -0.42
EPB41-208ENST00000460378 CDC5LQ99459 802 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms