RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 USP32Q8NFA0 1604 aa13.71□□□□□ -0.21
DDR1-239ENST00000452441 KCNA6P17658 529 aa13.71□□□□□ -0.22
DDR1-239ENST00000452441 VAMP4O75379 141 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
DDR1-239ENST00000452441 ANKLE2Q86XL3 938 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 CD163L1Q9NR16 1453 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 ABCC11Q96J66 1382 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
DDR1-239ENST00000452441 CDC45O75419 566 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 NUTM1Q86Y26 1132 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 STRN4Q9NRL3 753 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 PTPRMP28827 1452 aa13.7□□□□□ -0.22
DDR1-239ENST00000452441 TNPO1Q92973 898 aaKnown RBP13.69□□□□□ -0.22
DDR1-239ENST00000452441 ZBTB40Q9NUA8 1239 aa13.69□□□□□ -0.22
DDR1-239ENST00000452441 NSD2O96028 1365 aa13.69□□□□□ -0.22
DDR1-239ENST00000452441 SURF6O75683 361 aaKnown RBP13.69□□□□□ -0.22
DDR1-239ENST00000452441 HDGFL1Q5TGJ6 251 aa13.69□□□□□ -0.22
DDR1-239ENST00000452441 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
DDR1-239ENST00000452441 FOSBP53539 338 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 MPRIPQ6WCQ1 1025 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 GDPD2Q9HCC8 539 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 ST18O60284 1047 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 HSPA2P54652 639 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 FGD1P98174 961 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
DDR1-239ENST00000452441 G2E3Q7L622 706 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 CABLES1Q8TDN4 633 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 C9orf78Q9NZ63 289 aaPredicted RBP13.68□□□□□ -0.22
DDR1-239ENST00000452441 CFAP74Q9C0B2 1584 aa13.68□□□□□ -0.22
DDR1-239ENST00000452441 ADGRB2O60241 1585 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 PIP4K2AP48426 406 aaPredicted RBP13.67□□□□□ -0.22
DDR1-239ENST00000452441 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
DDR1-239ENST00000452441 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 DDX11L8A8MPP1 907 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 ATF3P18847 181 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 CHRNA2Q15822 529 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 GAS2L2Q8NHY3 880 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 NEO1Q92859 1461 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 MYL6BP14649 208 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 KIAA1211Q6ZU35 1233 aa13.67□□□□□ -0.22
DDR1-239ENST00000452441 JARID2Q92833 1246 aaPredicted RBP13.67□□□□□ -0.22
DDR1-239ENST00000452441 MSNP26038 577 aaKnown RBP13.66□□□□□ -0.22
DDR1-239ENST00000452441 LRRC59Q96AG4 307 aaKnown RBP13.66□□□□□ -0.22
DDR1-239ENST00000452441 SIL1Q9H173 461 aa13.66□□□□□ -0.22
DDR1-239ENST00000452441 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
DDR1-239ENST00000452441 NUCB1Q02818 461 aa13.65□□□□□ -0.22
DDR1-239ENST00000452441 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.22
DDR1-239ENST00000452441 K7ELQ4 463 aaPredicted RBP13.65□□□□□ -0.22
DDR1-239ENST00000452441 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
DDR1-239ENST00000452441 IL13P35225 146 aa13.65□□□□□ -0.22
DDR1-239ENST00000452441 MTHFSDQ2M296 383 aaKnown RBP13.65□□□□□ -0.22
DDR1-239ENST00000452441 INTS3Q68E01 1043 aaKnown RBP13.65□□□□□ -0.22
DDR1-239ENST00000452441 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
DDR1-239ENST00000452441 GCC1Q96CN9 775 aa13.65□□□□□ -0.22
DDR1-239ENST00000452441 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
DDR1-239ENST00000452441 TMEM131LA2VDJ0 1609 aa13.65□□□□□ -0.22
DDR1-239ENST00000452441 RICTORQ6R327 1708 aa13.65□□□□□ -0.22
DDR1-239ENST00000452441 PPFIA3O75145 1194 aa13.65□□□□□ -0.23
DDR1-239ENST00000452441 MCCP23508 829 aa13.65□□□□□ -0.23
DDR1-239ENST00000452441 EVA1CP58658 441 aa13.65□□□□□ -0.23
DDR1-239ENST00000452441 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
DDR1-239ENST00000452441 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
DDR1-239ENST00000452441 ZBTB7BO15156 539 aaPredicted RBP13.64□□□□□ -0.23
DDR1-239ENST00000452441 UBTFL1P0CB47 393 aaPredicted RBP13.64□□□□□ -0.23
DDR1-239ENST00000452441 CCDC85AQ96PX6 553 aaPredicted RBP13.64□□□□□ -0.23
DDR1-239ENST00000452441 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
DDR1-239ENST00000452441 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
DDR1-239ENST00000452441 ARHGAP31Q2M1Z3 1444 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 MRE11P49959 708 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 CCDC30Q5VVM6 783 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 EYA1Q99502 592 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 PREX1Q8TCU6 1659 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 GNAT3A8MTJ3 354 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 NPHP1O15259 732 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 ALDH1L2Q3SY69 923 aa13.63□□□□□ -0.23
DDR1-239ENST00000452441 ZGPATQ8N5A5 531 aaKnown RBP13.63□□□□□ -0.23
DDR1-239ENST00000452441 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
DDR1-239ENST00000452441 FSD2A1L4K1 749 aa13.62□□□□□ -0.23
DDR1-239ENST00000452441 KDM4AO75164 1064 aa13.62□□□□□ -0.23
DDR1-239ENST00000452441 SDSP20132 328 aa13.62□□□□□ -0.23
DDR1-239ENST00000452441 LRRFIP2Q9Y608 721 aaKnown RBP13.61□□□□□ -0.23
DDR1-239ENST00000452441 IL16Q14005 1332 aa13.61□□□□□ -0.23
DDR1-239ENST00000452441 REC8O95072 547 aa13.61□□□□□ -0.23
DDR1-239ENST00000452441 FBXW7Q969H0 707 aa13.61□□□□□ -0.23
DDR1-239ENST00000452441 CWC27Q6UX04 472 aaKnown RBP13.61□□□□□ -0.23
DDR1-239ENST00000452441 ALKQ9UM73 1620 aa13.61□□□□□ -0.23
DDR1-239ENST00000452441 ZFYVE9O95405 1425 aa13.6□□□□□ -0.23
DDR1-239ENST00000452441 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
DDR1-239ENST00000452441 NASPP49321 788 aaPredicted RBP13.6□□□□□ -0.23
DDR1-239ENST00000452441 PKP1Q13835 747 aa13.6□□□□□ -0.23
DDR1-239ENST00000452441 ARHGEF40Q8TER5 1519 aa13.6□□□□□ -0.23
DDR1-239ENST00000452441 SRGAP3O43295 1099 aa13.6□□□□□ -0.23
DDR1-239ENST00000452441 GNAI2P04899 355 aa13.6□□□□□ -0.23
DDR1-239ENST00000452441 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
DDR1-239ENST00000452441 VPS37CA5D8V6 355 aaPredicted RBP13.6□□□□□ -0.23
DDR1-239ENST00000452441 RBM25P49756 843 aaKnown RBP13.6□□□□□ -0.23
DDR1-239ENST00000452441 BMP2KLQ5H9B9 411 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms