RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 RABEP1Q15276 862 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 SLFNL1Q499Z3 407 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 SPRYD3Q8NCJ5 442 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 SECISBP2LQ93073 1101 aaKnown RBP6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 CDCA7LQ96GN5 454 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 KCNK17Q96T54 332 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 BCL2L12Q9HB09 334 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 USP25Q9UHP3 1055 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 ATP1B4Q9UN42 357 aaPredicted RBP6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 MORC2Q9Y6X9 1032 aaPredicted RBP6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 ITSN2Q9NZM3 1697 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 ANKRD36BQ8N2N9 1353 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 GRIN2BQ13224 1484 aa6.79□□□□□ -1.32
VTI1BP4-201ENST00000427516 SMTNL1A8MU46 457 aa6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 TUBB4AP04350 444 aa6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 TERF2Q15554 542 aa6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 CASC1Q6TDU7 716 aa6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 TRMT2AQ8IZ69 625 aaKnown RBP6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 ZNF397Q8NF99 534 aaPredicted RBP6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 JPH4Q96JJ6 628 aa6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 DDX41Q9UJV9 622 aaKnown RBP6.78□□□□□ -1.32
VTI1BP4-201ENST00000427516 RTEL1-TNFRSF6BF6WH68 1400 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 NUP160Q12769 1436 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 VGLL3A8MV65 326 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 REC8O95072 547 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 USP8P40818 1118 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 MCM2P49736 904 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 GTF2A1P52655 376 aaPredicted RBP6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 TMF1P82094 1093 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 LMOD3Q0VAK6 560 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 HDAC1Q13547 482 aaPredicted RBP6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 MUM1L1Q5H9M0 696 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 C20orf194Q5TEA3 1177 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 NCAPGQ9BPX3 1015 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 FAM107BQ9H098 131 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 DEF6Q9H4E7 631 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 ARGLU1Q9NWB6 273 aaPredicted RBP6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 KNSTRNQ9Y448 316 aa6.77□□□□□ -1.33
VTI1BP4-201ENST00000427516 DAPK1P53355 1430 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 TRIM6-TRIM34B2RNG4 842 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 TRDNQ13061 729 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 BMS1Q14692 1282 aaKnown RBP6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 HSP90AB3PQ58FF7 597 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 CCDC91Q7Z6B0 441 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 CCDC112Q8NEF3 446 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 AK7Q96M32 723 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 TRIM34Q9BYJ4 488 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 ADAM33Q9BZ11 813 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 SMC4Q9NTJ3 1288 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 VPS9D1Q9Y2B5 631 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 GRIN2AQ12879 1464 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 FAM135AQ9P2D6 1515 aa6.76□□□□□ -1.33
VTI1BP4-201ENST00000427516 CEP170Q5SW79 1584 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 CFTRP13569 1480 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 NEMFO60524 1076 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 TPM1P09493 284 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 ATP2B3Q16720 1220 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 BMP2KLQ5H9B9 411 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 ZDHHC16Q969W1 377 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 SLC4A5Q9BY07 1137 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 CHMP4AQ9BY43 222 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 RRP7BPQ9NSQ0 103 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 DDX19BQ9UMR2 479 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 PDZRN3Q9UPQ7 1066 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 PCDHGA10Q9Y5H3 936 aa6.75□□□□□ -1.33
VTI1BP4-201ENST00000427516 EIF4G3O43432 1585 aaKnown RBP6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 ADGRL2O95490 1459 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 UNC13AQ9UPW8 1703 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 ATP8B1O43520 1251 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 NRDCO43847 1150 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 IGHDP01880 384 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 IVLP07476 585 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 SLFN14P0C7P3 912 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 PTPREP23469 700 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 ICE2Q659A1 982 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 MCTP1Q6DN14 999 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 NOL10Q9BSC4 688 aaKnown RBP6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 RBSNQ9H1K0 784 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 PANK3Q9H999 370 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 CTNNA3Q9UI47 895 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 PTPRGP23470 1445 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 CCDC171Q6TFL3 1326 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 CFAP74Q9C0B2 1584 aa6.74□□□□□ -1.33
VTI1BP4-201ENST00000427516 KANK1Q14678 1352 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 A0A1B0GUL7 405 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 DPYSL4O14531 572 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 U2AF2P26368 475 aaKnown RBP eCLIP6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 SSR1P43307 286 aaKnown RBP6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 NBPF20Q3BBV1 942 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 KIF18AQ8NI77 898 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 ZBED2Q9BTP6 218 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 CEP83Q9Y592 693 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 ATP6V1DQ9Y5K8 247 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 PZPP20742 1482 aa6.73□□□□□ -1.33
VTI1BP4-201ENST00000427516 NESP48681 1621 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 PRDM15P57071 1507 aaPredicted RBP6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 ASXL1Q8IXJ9 1541 aa6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 BHMG1C9JSJ3 638 aaPredicted RBP6.72□□□□□ -1.33
VTI1BP4-201ENST00000427516 CLSTN1O94985 981 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms