RNA–Protein interactions for RNA: ENST00000425707.7

RARA-206, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-206ENST00000425707 OFD1O75665 1012 aa21.31■■□□□ 1
RARA-206ENST00000425707 AK9Q5TCS8 1911 aa21.31■■□□□ 1
RARA-206ENST00000425707 PTPRCP08575 1304 aa21.31■■□□□ 1
RARA-206ENST00000425707 REC8O95072 547 aa21.3■■□□□ 1
RARA-206ENST00000425707 PDLIM2Q96JY6 352 aa21.3■■□□□ 1
RARA-206ENST00000425707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.3■■□□□ 1
RARA-206ENST00000425707 ZSCAN23Q3MJ62 389 aa21.29■■□□□ 1
RARA-206ENST00000425707 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.29■■□□□ 1
RARA-206ENST00000425707 EMILIN1Q9Y6C2 1016 aa21.29■■□□□ 1
RARA-206ENST00000425707 CEP85Q6P2H3 762 aa21.28■■□□□ 1
RARA-206ENST00000425707 OSBPL3Q9H4L5 887 aa21.28■■□□□ 1
RARA-206ENST00000425707 ITSN1Q15811 1721 aa21.27■■□□□ 1
RARA-206ENST00000425707 MCTP1Q6DN14 999 aa21.27■■□□□ 1
RARA-206ENST00000425707 RTL1A6NKG5 1358 aa21.27■■□□□ 1
RARA-206ENST00000425707 MSNP26038 577 aaKnown RBP21.26■□□□□ 0.99
RARA-206ENST00000425707 PPP6R1Q9UPN7 881 aa21.26■□□□□ 0.99
RARA-206ENST00000425707 SDSP20132 328 aa21.26■□□□□ 0.99
RARA-206ENST00000425707 ELL2O00472 640 aaPredicted RBP21.26■□□□□ 0.99
RARA-206ENST00000425707 MCM5P33992 734 aa21.26■□□□□ 0.99
RARA-206ENST00000425707 TUBGCP6Q96RT7 1819 aa21.25■□□□□ 0.99
RARA-206ENST00000425707 A2ML1A8K2U0 1454 aa21.25■□□□□ 0.99
RARA-206ENST00000425707 ZNF500O60304 480 aaPredicted RBP21.25■□□□□ 0.99
RARA-206ENST00000425707 NOL7Q9UMY1 257 aaKnown RBP21.25■□□□□ 0.99
RARA-206ENST00000425707 MCM2P49736 904 aa21.25■□□□□ 0.99
RARA-206ENST00000425707 SIRT1Q96EB6 747 aa21.25■□□□□ 0.99
RARA-206ENST00000425707 SPATA31D1Q6ZQQ2 1576 aa21.25■□□□□ 0.99
RARA-206ENST00000425707 TSPOAP1O95153 1857 aa21.24■□□□□ 0.99
RARA-206ENST00000425707 CHL1O00533 1208 aa21.24■□□□□ 0.99
RARA-206ENST00000425707 WASLO00401 505 aaPredicted RBP21.23■□□□□ 0.99
RARA-206ENST00000425707 COG3Q96JB2 828 aa21.23■□□□□ 0.99
RARA-206ENST00000425707 PDCL3Q9H2J4 239 aa21.23■□□□□ 0.99
RARA-206ENST00000425707 ERC2O15083 957 aa21.23■□□□□ 0.99
RARA-206ENST00000425707 CAVIN1Q6NZI2 390 aaKnown RBP21.23■□□□□ 0.99
RARA-206ENST00000425707 KIAA1211Q6ZU35 1233 aa21.23■□□□□ 0.99
RARA-206ENST00000425707 NRXN3Q9Y4C0 1643 aa21.22■□□□□ 0.99
RARA-206ENST00000425707 CPS1P31327 1500 aa21.22■□□□□ 0.99
RARA-206ENST00000425707 AGLP35573 1532 aa21.22■□□□□ 0.99
RARA-206ENST00000425707 RGPD1P0DJD0 1748 aa21.22■□□□□ 0.99
RARA-206ENST00000425707 HMMRO75330 724 aa21.22■□□□□ 0.99
RARA-206ENST00000425707 FBLN1P23142 703 aa21.21■□□□□ 0.99
RARA-206ENST00000425707 IL17RAQ96F46 866 aa21.21■□□□□ 0.99
RARA-206ENST00000425707 DIP2BQ9P265 1576 aa21.21■□□□□ 0.99
RARA-206ENST00000425707 TECPR2O15040 1411 aa21.21■□□□□ 0.99
RARA-206ENST00000425707 MBD3O95983 291 aa21.21■□□□□ 0.99
RARA-206ENST00000425707 NME9Q86XW9 330 aa21.21■□□□□ 0.99
RARA-206ENST00000425707 C16orf71Q8IYS4 520 aaPredicted RBP21.21■□□□□ 0.99
RARA-206ENST00000425707 MSH6P52701 1360 aa21.21■□□□□ 0.99
RARA-206ENST00000425707 LRSAM1Q6UWE0 723 aa21.2■□□□□ 0.98
RARA-206ENST00000425707 ZDHHC9Q9Y397 364 aa21.2■□□□□ 0.98
RARA-206ENST00000425707 RBSNQ9H1K0 784 aa21.2■□□□□ 0.98
RARA-206ENST00000425707 WAPLQ7Z5K2 1190 aa21.18■□□□□ 0.98
RARA-206ENST00000425707 GPT2Q8TD30 523 aa21.18■□□□□ 0.98
RARA-206ENST00000425707 NALCNQ8IZF0 1738 aa21.18■□□□□ 0.98
RARA-206ENST00000425707 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
RARA-206ENST00000425707 FAM83GA6ND36 823 aa21.18■□□□□ 0.98
RARA-206ENST00000425707 EPB41L2O43491 1005 aaKnown RBP21.18■□□□□ 0.98
RARA-206ENST00000425707 ARHGEF10O15013 1369 aa21.18■□□□□ 0.98
RARA-206ENST00000425707 ANAPC15P60006 121 aa21.17■□□□□ 0.98
RARA-206ENST00000425707 PKP1Q13835 747 aa21.17■□□□□ 0.98
RARA-206ENST00000425707 OTUD7AQ8TE49 926 aaPredicted RBP21.17■□□□□ 0.98
RARA-206ENST00000425707 CUL4AQ13619 759 aa21.17■□□□□ 0.98
RARA-206ENST00000425707 CSPP1Q1MSJ5 1256 aa21.17■□□□□ 0.98
RARA-206ENST00000425707 INTS4Q96HW7 963 aaKnown RBP21.17■□□□□ 0.98
RARA-206ENST00000425707 CCDC61Q9Y6R9 512 aa21.17■□□□□ 0.98
RARA-206ENST00000425707 PRPF40AO75400 957 aaKnown RBP21.16■□□□□ 0.98
RARA-206ENST00000425707 PRIM1P49642 420 aaKnown RBP21.16■□□□□ 0.98
RARA-206ENST00000425707 MAP7D2Q96T17 732 aa21.16■□□□□ 0.98
RARA-206ENST00000425707 STAG3Q9UJ98 1225 aa21.16■□□□□ 0.98
RARA-206ENST00000425707 N4BP2Q86UW6 1770 aaPredicted RBP21.16■□□□□ 0.98
RARA-206ENST00000425707 NCLP19338 710 aaKnown RBP21.15■□□□□ 0.98
RARA-206ENST00000425707 ZGPATQ8N5A5 531 aaKnown RBP21.15■□□□□ 0.98
RARA-206ENST00000425707 FBXO31Q5XUX0 539 aaPredicted RBP21.15■□□□□ 0.98
RARA-206ENST00000425707 ZKSCAN5Q9Y2L8 839 aa21.15■□□□□ 0.98
RARA-206ENST00000425707 CRB1P82279 1406 aa21.15■□□□□ 0.98
RARA-206ENST00000425707 CCT4P50991 539 aaKnown RBP21.15■□□□□ 0.98
RARA-206ENST00000425707 NUDT16Q96DE0 195 aaKnown RBP21.15■□□□□ 0.98
RARA-206ENST00000425707 PDE1AP54750 535 aa21.14■□□□□ 0.98
RARA-206ENST00000425707 SALL3Q9BXA9 1300 aa21.14■□□□□ 0.97
RARA-206ENST00000425707 CCDC39Q9UFE4 941 aa21.14■□□□□ 0.97
RARA-206ENST00000425707 BRD1O95696 1058 aa21.13■□□□□ 0.97
RARA-206ENST00000425707 KLHL34Q8N239 644 aa21.13■□□□□ 0.97
RARA-206ENST00000425707 MEIS3Q99687 375 aa21.13■□□□□ 0.97
RARA-206ENST00000425707 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.13■□□□□ 0.97
RARA-206ENST00000425707 DCTN1Q14203 1278 aa21.13■□□□□ 0.97
RARA-206ENST00000425707 TOPAZ1Q8N9V7 1692 aa21.12■□□□□ 0.97
RARA-206ENST00000425707 MCCP23508 829 aa21.12■□□□□ 0.97
RARA-206ENST00000425707 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.12■□□□□ 0.97
RARA-206ENST00000425707 TMEM63CQ9P1W3 806 aa21.12■□□□□ 0.97
RARA-206ENST00000425707 EIF4A2Q14240 407 aaKnown RBP21.11■□□□□ 0.97
RARA-206ENST00000425707 RRS1Q15050 365 aaKnown RBP21.11■□□□□ 0.97
RARA-206ENST00000425707 TMX3Q96JJ7 454 aa21.11■□□□□ 0.97
RARA-206ENST00000425707 ZRANB1Q9UGI0 708 aa21.11■□□□□ 0.97
RARA-206ENST00000425707 OVOS2A0A0J9YW53 1432 aa21.11■□□□□ 0.97
RARA-206ENST00000425707 OVOS2Q6IE36 1432 aa21.11■□□□□ 0.97
RARA-206ENST00000425707 CACNA1FO60840 1977 aa21.11■□□□□ 0.97
RARA-206ENST00000425707 SMARCA5O60264 1052 aaPredicted RBP21.11■□□□□ 0.97
RARA-206ENST00000425707 SYAP1Q96A49 352 aaPredicted RBP21.1■□□□□ 0.97
RARA-206ENST00000425707 TTC21BQ7Z4L5 1316 aa21.1■□□□□ 0.97
RARA-206ENST00000425707 ESYT1Q9BSJ8 1104 aa21.1■□□□□ 0.97
RARA-206ENST00000425707 AOX1Q06278 1338 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms