RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 XBP1P17861 261 aa20.48■□□□□ 0.87
SYNGAP1-202ENST00000418600 ZRANB1Q9UGI0 708 aa20.48■□□□□ 0.87
SYNGAP1-202ENST00000418600 TPM2P07951 284 aa20.48■□□□□ 0.87
SYNGAP1-202ENST00000418600 KDM6BO15054 1643 aa20.48■□□□□ 0.87
SYNGAP1-202ENST00000418600 GPTP24298 496 aa20.48■□□□□ 0.87
SYNGAP1-202ENST00000418600 WDR78Q5VTH9 848 aa20.48■□□□□ 0.87
SYNGAP1-202ENST00000418600 NOP58Q9Y2X3 529 aaKnown RBP20.48■□□□□ 0.87
SYNGAP1-202ENST00000418600 SAFBQ15424 915 aaKnown RBP eCLIP20.47■□□□□ 0.87
SYNGAP1-202ENST00000418600 IFIT1P09914 478 aaKnown RBP20.47■□□□□ 0.87
SYNGAP1-202ENST00000418600 TRPC5Q9UL62 973 aaPredicted RBP20.47■□□□□ 0.87
SYNGAP1-202ENST00000418600 EMILIN1Q9Y6C2 1016 aa20.47■□□□□ 0.87
SYNGAP1-202ENST00000418600 PDE4CQ08493 712 aa20.46■□□□□ 0.87
SYNGAP1-202ENST00000418600 NFE2L2Q16236 605 aa20.46■□□□□ 0.87
SYNGAP1-202ENST00000418600 TRPM2O94759 1503 aa20.46■□□□□ 0.87
SYNGAP1-202ENST00000418600 LARP1Q6PKG0 1096 aaKnown RBP20.46■□□□□ 0.87
SYNGAP1-202ENST00000418600 EXOSC9Q06265 439 aaKnown RBP20.46■□□□□ 0.87
SYNGAP1-202ENST00000418600 DZIP1Q86YF9 867 aaKnown RBP20.46■□□□□ 0.87
SYNGAP1-202ENST00000418600 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.87
SYNGAP1-202ENST00000418600 MCM10Q7L590 875 aa20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 STK11IPQ8N1F8 1099 aa20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 DISP3Q9P2K9 1392 aa20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 CDC5LQ99459 802 aaKnown RBP20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 CCNL1Q9UK58 526 aaPredicted RBP20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 NOC3LQ8WTT2 800 aaKnown RBP20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 PES1O00541 588 aaKnown RBP20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 TRAPPC3LQ5T215 181 aa20.45■□□□□ 0.86
SYNGAP1-202ENST00000418600 MIS18AQ9NYP9 233 aa20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 USP5P45974 858 aa20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 SYAP1Q96A49 352 aaPredicted RBP20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 GBP4Q96PP9 640 aa20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 ARHGEF10O15013 1369 aa20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 CHD1O14646 1710 aa20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 ANKRD18BA2A2Z9 1011 aa20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 FKBP4Q02790 459 aaKnown RBP eCLIP20.44■□□□□ 0.86
SYNGAP1-202ENST00000418600 NYXQ9GZU5 481 aa20.43■□□□□ 0.86
SYNGAP1-202ENST00000418600 REC8O95072 547 aa20.43■□□□□ 0.86
SYNGAP1-202ENST00000418600 ATP7AQ04656 1500 aa20.43■□□□□ 0.86
SYNGAP1-202ENST00000418600 ZBTB3Q9H5J0 574 aa20.42■□□□□ 0.86
SYNGAP1-202ENST00000418600 HIP1O00291 1037 aa20.42■□□□□ 0.86
SYNGAP1-202ENST00000418600 IFIT5Q13325 482 aaKnown RBP20.42■□□□□ 0.86
SYNGAP1-202ENST00000418600 ABCF2Q9UG63 623 aa20.42■□□□□ 0.86
SYNGAP1-202ENST00000418600 SLC5A1P13866 664 aa20.42■□□□□ 0.86
SYNGAP1-202ENST00000418600 AKAP2Q9Y2D5 859 aa20.42■□□□□ 0.86
SYNGAP1-202ENST00000418600 SCAF11Q99590 1463 aaKnown RBP20.42■□□□□ 0.86
SYNGAP1-202ENST00000418600 POLR3DP05423 398 aaPredicted RBP20.41■□□□□ 0.86
SYNGAP1-202ENST00000418600 PCDH11XQ9BZA7 1347 aa20.41■□□□□ 0.86
SYNGAP1-202ENST00000418600 PCDH11YQ9BZA8 1340 aa20.41■□□□□ 0.86
SYNGAP1-202ENST00000418600 GNPATO15228 680 aa20.4■□□□□ 0.86
SYNGAP1-202ENST00000418600 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
SYNGAP1-202ENST00000418600 FAM161AQ3B820 660 aa20.4■□□□□ 0.86
SYNGAP1-202ENST00000418600 ZNF287Q9HBT7 754 aa20.4■□□□□ 0.86
SYNGAP1-202ENST00000418600 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
SYNGAP1-202ENST00000418600 TSR2Q969E8 191 aaKnown RBP20.39■□□□□ 0.85
SYNGAP1-202ENST00000418600 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
SYNGAP1-202ENST00000418600 SNRPA1P09661 255 aaKnown RBP20.38■□□□□ 0.85
SYNGAP1-202ENST00000418600 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
SYNGAP1-202ENST00000418600 TDO2P48775 406 aa20.38■□□□□ 0.85
SYNGAP1-202ENST00000418600 CHMP4BP1P59074 171 aa20.38■□□□□ 0.85
SYNGAP1-202ENST00000418600 OGFOD1Q8N543 542 aa20.38■□□□□ 0.85
SYNGAP1-202ENST00000418600 CCDC87Q9NVE4 849 aa20.37■□□□□ 0.85
SYNGAP1-202ENST00000418600 IBSPP21815 317 aaPredicted RBP20.37■□□□□ 0.85
SYNGAP1-202ENST00000418600 SLKQ9H2G2 1235 aaPredicted RBP20.37■□□□□ 0.85
SYNGAP1-202ENST00000418600 FOXD4L1Q9NU39 408 aa20.37■□□□□ 0.85
SYNGAP1-202ENST00000418600 DUSP27Q5VZP5 1158 aa20.37■□□□□ 0.85
SYNGAP1-202ENST00000418600 RPRD2Q5VT52 1461 aaKnown RBP20.36■□□□□ 0.85
SYNGAP1-202ENST00000418600 SIRT1Q96EB6 747 aa20.36■□□□□ 0.85
SYNGAP1-202ENST00000418600 CCDC152Q4G0S7 254 aa20.36■□□□□ 0.85
SYNGAP1-202ENST00000418600 KDM4AO75164 1064 aa20.36■□□□□ 0.85
SYNGAP1-202ENST00000418600 ATF7IPQ6VMQ6 1270 aa20.35■□□□□ 0.85
SYNGAP1-202ENST00000418600 GJA3Q9Y6H8 435 aa20.35■□□□□ 0.85
SYNGAP1-202ENST00000418600 GCP02774 474 aa20.35■□□□□ 0.85
SYNGAP1-202ENST00000418600 SPDYE4A6NLX3 237 aa20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 SOGA3Q5TF21 947 aa20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 CRBNQ96SW2 442 aa20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 NOB1Q9ULX3 412 aaKnown RBP20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 IDH1O75874 414 aaKnown RBP20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 INTS3Q68E01 1043 aaKnown RBP20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 TMEM87AQ8NBN3 555 aa20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
SYNGAP1-202ENST00000418600 CENPQQ7L2Z9 268 aaPredicted RBP20.33■□□□□ 0.85
SYNGAP1-202ENST00000418600 NIP7Q9Y221 180 aaKnown RBP eCLIP20.33■□□□□ 0.85
SYNGAP1-202ENST00000418600 AACSQ86V21 672 aa20.33■□□□□ 0.85
SYNGAP1-202ENST00000418600 DDX17Q92841 729 aaKnown RBP20.33■□□□□ 0.85
SYNGAP1-202ENST00000418600 TPTE2Q6XPS3 522 aa20.33■□□□□ 0.85
SYNGAP1-202ENST00000418600 NPATQ14207 1427 aa20.33■□□□□ 0.84
SYNGAP1-202ENST00000418600 PSMA5P28066 241 aa20.33■□□□□ 0.84
SYNGAP1-202ENST00000418600 FOSBP53539 338 aa20.33■□□□□ 0.84
SYNGAP1-202ENST00000418600 FEZ1Q99689 392 aa20.33■□□□□ 0.84
SYNGAP1-202ENST00000418600 RBM26Q5T8P6 1007 aaKnown RBP20.33■□□□□ 0.84
SYNGAP1-202ENST00000418600 DISP1Q96F81 1524 aa20.32■□□□□ 0.84
SYNGAP1-202ENST00000418600 CWC25Q9NXE8 425 aaPredicted RBP20.32■□□□□ 0.84
SYNGAP1-202ENST00000418600 FOXD4L5Q5VV16 416 aaPredicted RBP20.32■□□□□ 0.84
SYNGAP1-202ENST00000418600 FOXD4L4Q8WXT5 416 aaPredicted RBP20.32■□□□□ 0.84
SYNGAP1-202ENST00000418600 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
SYNGAP1-202ENST00000418600 NSD2O96028 1365 aa20.31■□□□□ 0.84
SYNGAP1-202ENST00000418600 CERKQ8TCT0 537 aa20.31■□□□□ 0.84
SYNGAP1-202ENST00000418600 AIDAQ96BJ3 306 aa20.31■□□□□ 0.84
SYNGAP1-202ENST00000418600 CDK5RAP3Q96JB5 506 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms