RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
HOXD3-202ENST00000410016 ATP10DQ9P241 1426 aa19.81■□□□□ 0.76
HOXD3-202ENST00000410016 TTC21AQ8NDW8 1320 aa19.8■□□□□ 0.76
HOXD3-202ENST00000410016 PTPRCP08575 1304 aa19.8■□□□□ 0.76
HOXD3-202ENST00000410016 ARHGEF10O15013 1369 aa19.79■□□□□ 0.76
HOXD3-202ENST00000410016 SOX12O15370 315 aa19.79■□□□□ 0.76
HOXD3-202ENST00000410016 RPAP2Q8IXW5 612 aaPredicted RBP19.79■□□□□ 0.76
HOXD3-202ENST00000410016 TBX22Q9Y458 520 aa19.79■□□□□ 0.76
HOXD3-202ENST00000410016 FOXO3O43524 673 aa19.78■□□□□ 0.76
HOXD3-202ENST00000410016 MTHFSDQ2M296 383 aaKnown RBP19.78■□□□□ 0.76
HOXD3-202ENST00000410016 CEP85Q6P2H3 762 aa19.78■□□□□ 0.76
HOXD3-202ENST00000410016 EID1Q9Y6B2 187 aa19.78■□□□□ 0.76
HOXD3-202ENST00000410016 KDRP35968 1356 aa19.77■□□□□ 0.76
HOXD3-202ENST00000410016 MIS18AQ9NYP9 233 aa19.77■□□□□ 0.76
HOXD3-202ENST00000410016 RTL1A6NKG5 1358 aa19.77■□□□□ 0.76
HOXD3-202ENST00000410016 CDC45O75419 566 aa19.77■□□□□ 0.75
HOXD3-202ENST00000410016 CD2BP2O95400 341 aaKnown RBP19.77■□□□□ 0.75
HOXD3-202ENST00000410016 C16orf71Q8IYS4 520 aaPredicted RBP19.77■□□□□ 0.75
HOXD3-202ENST00000410016 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
HOXD3-202ENST00000410016 SBNO1A3KN83 1393 aa19.76■□□□□ 0.75
HOXD3-202ENST00000410016 ARHGAP23Q9P227 1491 aa19.75■□□□□ 0.75
HOXD3-202ENST00000410016 FLT4P35916 1363 aa19.75■□□□□ 0.75
HOXD3-202ENST00000410016 MSH6P52701 1360 aa19.75■□□□□ 0.75
HOXD3-202ENST00000410016 MEIS3Q99687 375 aa19.75■□□□□ 0.75
HOXD3-202ENST00000410016 SLIT1O75093 1534 aa19.75■□□□□ 0.75
HOXD3-202ENST00000410016 TTC22Q5TAA0 569 aa19.75■□□□□ 0.75
HOXD3-202ENST00000410016 EYA1Q99502 592 aa19.75■□□□□ 0.75
HOXD3-202ENST00000410016 RBM42Q9BTD8 480 aaKnown RBP19.73■□□□□ 0.75
HOXD3-202ENST00000410016 IGSF1Q8N6C5 1336 aa19.73■□□□□ 0.75
HOXD3-202ENST00000410016 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
HOXD3-202ENST00000410016 OTUD7AQ8TE49 926 aaPredicted RBP19.73■□□□□ 0.75
HOXD3-202ENST00000410016 CIZ1Q9ULV3 898 aaPredicted RBP19.73■□□□□ 0.75
HOXD3-202ENST00000410016 TRAK2O60296 914 aa19.72■□□□□ 0.75
HOXD3-202ENST00000410016 G2E3Q7L622 706 aa19.72■□□□□ 0.75
HOXD3-202ENST00000410016 RTF1Q92541 710 aaKnown RBP19.72■□□□□ 0.75
HOXD3-202ENST00000410016 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
HOXD3-202ENST00000410016 HSP90AB1P08238 724 aaKnown RBP19.71■□□□□ 0.75
HOXD3-202ENST00000410016 FSD2A1L4K1 749 aa19.71■□□□□ 0.75
HOXD3-202ENST00000410016 K7ELQ4 463 aaPredicted RBP19.7■□□□□ 0.74
HOXD3-202ENST00000410016 CEP170BQ9Y4F5 1589 aaPredicted RBP19.7■□□□□ 0.74
HOXD3-202ENST00000410016 AMPHP49418 695 aa19.7■□□□□ 0.74
HOXD3-202ENST00000410016 L1TD1Q5T7N2 865 aaKnown RBP19.7■□□□□ 0.74
HOXD3-202ENST00000410016 TNPO1Q92973 898 aaKnown RBP19.7■□□□□ 0.74
HOXD3-202ENST00000410016 DIP2AQ14689 1571 aa19.7■□□□□ 0.74
HOXD3-202ENST00000410016 RAB3GAP1Q15042 981 aa19.69■□□□□ 0.74
HOXD3-202ENST00000410016 GAS2L2Q8NHY3 880 aa19.69■□□□□ 0.74
HOXD3-202ENST00000410016 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
HOXD3-202ENST00000410016 UBE2Q2Q8WVN8 375 aa19.69■□□□□ 0.74
HOXD3-202ENST00000410016 DDX11L8A8MPP1 907 aa19.68■□□□□ 0.74
HOXD3-202ENST00000410016 F6X3S4 739 aa19.68■□□□□ 0.74
HOXD3-202ENST00000410016 USP26Q9BXU7 913 aa19.68■□□□□ 0.74
HOXD3-202ENST00000410016 HTATSF1O43719 755 aaKnown RBP19.68■□□□□ 0.74
HOXD3-202ENST00000410016 EIF5BO60841 1220 aaKnown RBP19.68■□□□□ 0.74
HOXD3-202ENST00000410016 SDSP20132 328 aa19.68■□□□□ 0.74
HOXD3-202ENST00000410016 RIMS1Q86UR5 1692 aaKnown RBP19.67■□□□□ 0.74
HOXD3-202ENST00000410016 GZF1Q9H116 711 aaPredicted RBP19.67■□□□□ 0.74
HOXD3-202ENST00000410016 FMN2Q9NZ56 1722 aa19.67■□□□□ 0.74
HOXD3-202ENST00000410016 CCT4P50991 539 aaKnown RBP19.66■□□□□ 0.74
HOXD3-202ENST00000410016 NLRP6P59044 892 aa19.66■□□□□ 0.74
HOXD3-202ENST00000410016 THEMISQ8N1K5 641 aaPredicted RBP19.66■□□□□ 0.74
HOXD3-202ENST00000410016 PIK3C2AO00443 1686 aa19.66■□□□□ 0.74
HOXD3-202ENST00000410016 RGPD8O14715 1765 aaPredicted RBP19.66■□□□□ 0.74
HOXD3-202ENST00000410016 XRCC6P12956 609 aaKnown RBP eCLIP19.65■□□□□ 0.74
HOXD3-202ENST00000410016 SLC4A10Q6U841 1118 aa19.65■□□□□ 0.74
HOXD3-202ENST00000410016 GOLGA6L3A6NEY3 463 aa19.64■□□□□ 0.74
HOXD3-202ENST00000410016 APBB1O00213 710 aa19.64■□□□□ 0.74
HOXD3-202ENST00000410016 HOXC9P31274 260 aa19.64■□□□□ 0.74
HOXD3-202ENST00000410016 HMMRO75330 724 aa19.63■□□□□ 0.73
HOXD3-202ENST00000410016 RABEP1Q15276 862 aa19.63■□□□□ 0.73
HOXD3-202ENST00000410016 OSBPL3Q9H4L5 887 aa19.63■□□□□ 0.73
HOXD3-202ENST00000410016 ANKARQ7Z5J8 1434 aa19.63■□□□□ 0.73
HOXD3-202ENST00000410016 GNAT3A8MTJ3 354 aa19.63■□□□□ 0.73
HOXD3-202ENST00000410016 KCNA6P17658 529 aa19.63■□□□□ 0.73
HOXD3-202ENST00000410016 FOXD4L1Q9NU39 408 aa19.63■□□□□ 0.73
HOXD3-202ENST00000410016 HSP90AA1P07900 732 aaKnown RBP19.62■□□□□ 0.73
HOXD3-202ENST00000410016 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
HOXD3-202ENST00000410016 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
HOXD3-202ENST00000410016 NWD1Q149M9 1564 aa19.62■□□□□ 0.73
HOXD3-202ENST00000410016 XRN1Q8IZH2 1706 aaKnown RBP19.61■□□□□ 0.73
HOXD3-202ENST00000410016 GBP4Q96PP9 640 aa19.61■□□□□ 0.73
HOXD3-202ENST00000410016 STK31Q9BXU1 1019 aa19.61■□□□□ 0.73
HOXD3-202ENST00000410016 GNAI2P04899 355 aa19.61■□□□□ 0.73
HOXD3-202ENST00000410016 FLIIQ13045 1269 aa19.61■□□□□ 0.73
HOXD3-202ENST00000410016 NUTM2GQ5VZR2 741 aa19.61■□□□□ 0.73
HOXD3-202ENST00000410016 FAM43AQ8N2R8 423 aa19.61■□□□□ 0.73
HOXD3-202ENST00000410016 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
HOXD3-202ENST00000410016 LRRC37A3O60309 1634 aa19.59■□□□□ 0.73
HOXD3-202ENST00000410016 PDE1AP54750 535 aa19.59■□□□□ 0.73
HOXD3-202ENST00000410016 CLEC17AQ6ZS10 378 aa19.59■□□□□ 0.73
HOXD3-202ENST00000410016 ABTB2Q8N961 1025 aa19.58■□□□□ 0.73
HOXD3-202ENST00000410016 BABAM1Q9NWV8 329 aa19.58■□□□□ 0.72
HOXD3-202ENST00000410016 SALL3Q9BXA9 1300 aa19.58■□□□□ 0.72
HOXD3-202ENST00000410016 MARF1Q9Y4F3 1742 aaKnown RBP19.58■□□□□ 0.72
HOXD3-202ENST00000410016 CASC1Q6TDU7 716 aa19.57■□□□□ 0.72
HOXD3-202ENST00000410016 SOS1Q07889 1333 aaPredicted RBP19.57■□□□□ 0.72
HOXD3-202ENST00000410016 SSFA2P28290 1259 aa19.57■□□□□ 0.72
HOXD3-202ENST00000410016 FKBP5Q13451 457 aaPredicted RBP19.57■□□□□ 0.72
HOXD3-202ENST00000410016 TAF7Q15545 349 aaPredicted RBP19.57■□□□□ 0.72
HOXD3-202ENST00000410016 PANK2Q9BZ23 570 aa19.57■□□□□ 0.72
HOXD3-202ENST00000410016 ANO8Q9HCE9 1232 aaPredicted RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms