RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 MAP7D2Q96T17 732 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 CFAP45Q9UL16 551 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 GLRX3O76003 335 aaKnown RBP18.55■□□□□ 0.56
GNE-202ENST00000396594 PPP4R3BQ5MIZ7 849 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 ARHGEF12Q9NZN5 1544 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 CCDC69A6NI79 296 aa18.55■□□□□ 0.56
GNE-202ENST00000396594 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
GNE-202ENST00000396594 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
GNE-202ENST00000396594 RAD21O60216 631 aa18.54■□□□□ 0.56
GNE-202ENST00000396594 TMOD2Q9NZR1 351 aa18.54■□□□□ 0.56
GNE-202ENST00000396594 DNAJC2Q99543 621 aaKnown RBP18.54■□□□□ 0.56
GNE-202ENST00000396594 STRN4Q9NRL3 753 aa18.54■□□□□ 0.56
GNE-202ENST00000396594 HOMER1Q86YM7 354 aa18.53■□□□□ 0.56
GNE-202ENST00000396594 ODF2Q5BJF6 829 aa18.53■□□□□ 0.56
GNE-202ENST00000396594 NUTM2GQ5VZR2 741 aa18.53■□□□□ 0.56
GNE-202ENST00000396594 OFD1O75665 1012 aa18.53■□□□□ 0.56
GNE-202ENST00000396594 STK38Q15208 465 aa18.52■□□□□ 0.56
GNE-202ENST00000396594 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.56
GNE-202ENST00000396594 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
GNE-202ENST00000396594 KRT85P78386 507 aa18.52■□□□□ 0.56
GNE-202ENST00000396594 CT47A1Q5JQC4 288 aaPredicted RBP18.52■□□□□ 0.56
GNE-202ENST00000396594 TMOD3Q9NYL9 352 aa18.52■□□□□ 0.56
GNE-202ENST00000396594 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
GNE-202ENST00000396594 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
GNE-202ENST00000396594 RUFY1Q96T51 708 aa18.51■□□□□ 0.55
GNE-202ENST00000396594 NEK4P51957 841 aa18.51■□□□□ 0.55
GNE-202ENST00000396594 BLOC1S2Q6QNY1 142 aa18.51■□□□□ 0.55
GNE-202ENST00000396594 K7ELQ4 463 aaPredicted RBP18.51■□□□□ 0.55
GNE-202ENST00000396594 IFIT1P09914 478 aaKnown RBP18.51■□□□□ 0.55
GNE-202ENST00000396594 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
GNE-202ENST00000396594 BMP2KQ9NSY1 1161 aaPredicted RBP18.51■□□□□ 0.55
GNE-202ENST00000396594 ZNHIT6Q9NWK9 470 aaKnown RBP18.5■□□□□ 0.55
GNE-202ENST00000396594 IKQ13123 557 aaPredicted RBP18.5■□□□□ 0.55
GNE-202ENST00000396594 MNS1Q8NEH6 495 aa18.5■□□□□ 0.55
GNE-202ENST00000396594 ZFYVE9O95405 1425 aa18.5■□□□□ 0.55
GNE-202ENST00000396594 NOS1P29475 1434 aa18.5■□□□□ 0.55
GNE-202ENST00000396594 SH2B1Q9NRF2 756 aaPredicted RBP18.5■□□□□ 0.55
GNE-202ENST00000396594 HMGN5P82970 282 aaKnown RBP18.49■□□□□ 0.55
GNE-202ENST00000396594 IMMTQ16891 758 aaKnown RBP18.49■□□□□ 0.55
GNE-202ENST00000396594 TNNT3P45378 269 aaPredicted RBP18.49■□□□□ 0.55
GNE-202ENST00000396594 PYM1Q9BRP8 204 aaKnown RBP18.49■□□□□ 0.55
GNE-202ENST00000396594 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
GNE-202ENST00000396594 CCDC192P0DO97 292 aa18.49■□□□□ 0.55
GNE-202ENST00000396594 ARHGAP45Q92619 1136 aa18.49■□□□□ 0.55
GNE-202ENST00000396594 DBF4Q9UBU7 674 aaPredicted RBP18.49■□□□□ 0.55
GNE-202ENST00000396594 RNF41Q9H4P4 317 aaPredicted RBP18.48■□□□□ 0.55
GNE-202ENST00000396594 PRM3Q9NNZ6 103 aa18.48■□□□□ 0.55
GNE-202ENST00000396594 UHRF1BP1Q6BDS2 1440 aa18.48■□□□□ 0.55
GNE-202ENST00000396594 ASXL2Q76L83 1435 aa18.48■□□□□ 0.55
GNE-202ENST00000396594 FMNL2Q96PY5 1086 aa18.48■□□□□ 0.55
GNE-202ENST00000396594 TRIM21P19474 475 aaKnown RBP18.48■□□□□ 0.55
GNE-202ENST00000396594 UBAC1Q9BSL1 405 aa18.48■□□□□ 0.55
GNE-202ENST00000396594 TRPM2O94759 1503 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 SMC2O95347 1197 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 TRAF1Q13077 416 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 TTF1Q15361 905 aaPredicted RBP18.47■□□□□ 0.55
GNE-202ENST00000396594 CAVIN4Q5BKX8 364 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 SLC26A8Q96RN1 970 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 CFAP74Q9C0B2 1584 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 ATP10BO94823 1461 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 SRGAP3O43295 1099 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 DESP17661 470 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 CCDC178Q5BJE1 867 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 MSH6P52701 1360 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 WDHD1O75717 1129 aaPredicted RBP18.47■□□□□ 0.55
GNE-202ENST00000396594 SYCP1Q15431 976 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 AMOTL2Q9Y2J4 779 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
GNE-202ENST00000396594 PIK3R4Q99570 1358 aa18.47■□□□□ 0.55
GNE-202ENST00000396594 AACSQ86V21 672 aa18.46■□□□□ 0.55
GNE-202ENST00000396594 EHMT1Q9H9B1 1298 aa18.46■□□□□ 0.55
GNE-202ENST00000396594 RTN4Q9NQC3 1192 aaKnown RBP18.46■□□□□ 0.55
GNE-202ENST00000396594 ASXL1Q8IXJ9 1541 aa18.45■□□□□ 0.54
GNE-202ENST00000396594 WDR62O43379 1518 aa18.45■□□□□ 0.54
GNE-202ENST00000396594 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
GNE-202ENST00000396594 HSP90B2PQ58FF3 399 aa18.45■□□□□ 0.54
GNE-202ENST00000396594 ZNF608Q9ULD9 1512 aaPredicted RBP18.45■□□□□ 0.54
GNE-202ENST00000396594 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
GNE-202ENST00000396594 SMTNL1A8MU46 457 aa18.44■□□□□ 0.54
GNE-202ENST00000396594 IFNL2Q8IZJ0 200 aa18.44■□□□□ 0.54
GNE-202ENST00000396594 NASPP49321 788 aaPredicted RBP18.44■□□□□ 0.54
GNE-202ENST00000396594 IQCEQ6IPM2 695 aa18.44■□□□□ 0.54
GNE-202ENST00000396594 SLC5A1P13866 664 aa18.44■□□□□ 0.54
GNE-202ENST00000396594 TNIP1Q15025 636 aa18.44■□□□□ 0.54
GNE-202ENST00000396594 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
GNE-202ENST00000396594 KRT18P05783 430 aaKnown RBP18.43■□□□□ 0.54
GNE-202ENST00000396594 DDX54Q8TDD1 881 aaKnown RBP18.43■□□□□ 0.54
GNE-202ENST00000396594 LDHCP07864 332 aa18.43■□□□□ 0.54
GNE-202ENST00000396594 ZPR1O75312 459 aa18.43■□□□□ 0.54
GNE-202ENST00000396594 ERLIN2O94905 339 aa18.43■□□□□ 0.54
GNE-202ENST00000396594 KIF20AO95235 890 aa18.43■□□□□ 0.54
GNE-202ENST00000396594 PDRG1Q9NUG6 133 aa18.43■□□□□ 0.54
GNE-202ENST00000396594 ABCC2Q92887 1545 aa18.43■□□□□ 0.54
GNE-202ENST00000396594 NUP153P49790 1475 aaKnown RBP18.43■□□□□ 0.54
GNE-202ENST00000396594 CCAR2Q8N163 923 aaKnown RBP18.42■□□□□ 0.54
GNE-202ENST00000396594 NPHP3Q7Z494 1330 aa18.42■□□□□ 0.54
GNE-202ENST00000396594 FYB1O15117 783 aa18.42■□□□□ 0.54
GNE-202ENST00000396594 TSR2Q969E8 191 aaKnown RBP18.42■□□□□ 0.54
GNE-202ENST00000396594 MAP3K12Q12852 859 aa18.41■□□□□ 0.54
GNE-202ENST00000396594 IDI1Q13907 227 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms