RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 SHPRHQ149N8 1683 aa26.75■■□□□ 1.87
CLDND1-202ENST00000394180 NUCB1Q02818 461 aa26.74■■□□□ 1.87
CLDND1-202ENST00000394180 ATAD2Q6PL18 1390 aa26.73■■□□□ 1.87
CLDND1-202ENST00000394180 CAVIN1Q6NZI2 390 aaKnown RBP26.72■■□□□ 1.87
CLDND1-202ENST00000394180 CABP1Q9NZU7 370 aa26.72■■□□□ 1.87
CLDND1-202ENST00000394180 PRIM1P49642 420 aaKnown RBP26.71■■□□□ 1.87
CLDND1-202ENST00000394180 FTSJ3Q8IY81 847 aaKnown RBP26.71■■□□□ 1.87
CLDND1-202ENST00000394180 GAS2L2Q8NHY3 880 aa26.7■■□□□ 1.86
CLDND1-202ENST00000394180 PRR36Q9H6K5 1346 aa26.69■■□□□ 1.86
CLDND1-202ENST00000394180 NUDT16Q96DE0 195 aaKnown RBP26.69■■□□□ 1.86
CLDND1-202ENST00000394180 ADGRB2O60241 1585 aa26.69■■□□□ 1.86
CLDND1-202ENST00000394180 RABEP1Q15276 862 aa26.67■■□□□ 1.86
CLDND1-202ENST00000394180 ZNF710Q8N1W2 664 aa26.67■■□□□ 1.86
CLDND1-202ENST00000394180 TNNQ9UQP3 1299 aa26.67■■□□□ 1.86
CLDND1-202ENST00000394180 NWD1Q149M9 1564 aa26.67■■□□□ 1.86
CLDND1-202ENST00000394180 MBD3O95983 291 aa26.66■■□□□ 1.86
CLDND1-202ENST00000394180 PIBF1Q8WXW3 757 aa26.66■■□□□ 1.86
CLDND1-202ENST00000394180 A0A1W2PP64 1363 aa26.66■■□□□ 1.86
CLDND1-202ENST00000394180 MCTP1Q6DN14 999 aa26.66■■□□□ 1.86
CLDND1-202ENST00000394180 KLHL34Q8N239 644 aa26.66■■□□□ 1.86
CLDND1-202ENST00000394180 NSD3Q9BZ95 1437 aa26.65■■□□□ 1.86
CLDND1-202ENST00000394180 ATP7BP35670 1465 aa26.65■■□□□ 1.86
CLDND1-202ENST00000394180 STRCP1A6NGW2 1772 aa26.65■■□□□ 1.86
CLDND1-202ENST00000394180 ANKRD36BQ8N2N9 1353 aa26.65■■□□□ 1.86
CLDND1-202ENST00000394180 PROSER2Q86WR7 435 aaPredicted RBP26.65■■□□□ 1.86
CLDND1-202ENST00000394180 IPO4Q8TEX9 1081 aaKnown RBP26.65■■□□□ 1.86
CLDND1-202ENST00000394180 KIF3AQ9Y496 699 aa26.65■■□□□ 1.86
CLDND1-202ENST00000394180 CD163L1Q9NR16 1453 aa26.64■■□□□ 1.86
CLDND1-202ENST00000394180 PPIP5K1Q6PFW1 1433 aa26.64■■□□□ 1.86
CLDND1-202ENST00000394180 FEZ1Q99689 392 aa26.64■■□□□ 1.86
CLDND1-202ENST00000394180 NALCNQ8IZF0 1738 aa26.64■■□□□ 1.85
CLDND1-202ENST00000394180 CD2BP2O95400 341 aaKnown RBP26.63■■□□□ 1.85
CLDND1-202ENST00000394180 C14orf37Q86TY3 774 aa26.63■■□□□ 1.85
CLDND1-202ENST00000394180 CCDC61Q9Y6R9 512 aa26.63■■□□□ 1.85
CLDND1-202ENST00000394180 UVSSAQ2YD98 709 aa26.63■■□□□ 1.85
CLDND1-202ENST00000394180 CHD1LQ86WJ1 897 aa26.62■■□□□ 1.85
CLDND1-202ENST00000394180 TMEM51Q9NW97 253 aa26.62■■□□□ 1.85
CLDND1-202ENST00000394180 TCP11L2Q8N4U5 519 aa26.61■■□□□ 1.85
CLDND1-202ENST00000394180 ZBTB40Q9NUA8 1239 aa26.61■■□□□ 1.85
CLDND1-202ENST00000394180 SPTLC3Q9NUV7 552 aa26.61■■□□□ 1.85
CLDND1-202ENST00000394180 FAM184AQ8NB25 1140 aa26.59■■□□□ 1.85
CLDND1-202ENST00000394180 TERF2IPQ9NYB0 399 aa26.59■■□□□ 1.85
CLDND1-202ENST00000394180 ZNF335Q9H4Z2 1342 aaPredicted RBP26.59■■□□□ 1.85
CLDND1-202ENST00000394180 CHMP4BQ9H444 224 aaKnown RBP26.59■■□□□ 1.85
CLDND1-202ENST00000394180 CBX1P83916 185 aa26.58■■□□□ 1.85
CLDND1-202ENST00000394180 GCC1Q96CN9 775 aa26.58■■□□□ 1.85
CLDND1-202ENST00000394180 NAP1L2Q9ULW6 460 aaPredicted RBP26.58■■□□□ 1.85
CLDND1-202ENST00000394180 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.58■■□□□ 1.85
CLDND1-202ENST00000394180 ADGRL3Q9HAR2 1447 aa26.58■■□□□ 1.85
CLDND1-202ENST00000394180 ATF7IPQ6VMQ6 1270 aa26.58■■□□□ 1.85
CLDND1-202ENST00000394180 USP32Q8NFA0 1604 aa26.58■■□□□ 1.85
CLDND1-202ENST00000394180 PDIA4P13667 645 aaKnown RBP26.57■■□□□ 1.84
CLDND1-202ENST00000394180 GPT2Q8TD30 523 aa26.57■■□□□ 1.84
CLDND1-202ENST00000394180 FKBP5Q13451 457 aaPredicted RBP26.57■■□□□ 1.84
CLDND1-202ENST00000394180 RGPD8O14715 1765 aaPredicted RBP26.56■■□□□ 1.84
CLDND1-202ENST00000394180 GABPB1Q06547 395 aaPredicted RBP26.56■■□□□ 1.84
CLDND1-202ENST00000394180 NOLC1Q14978 699 aaKnown RBP eCLIP26.56■■□□□ 1.84
CLDND1-202ENST00000394180 HDGFL2Q7Z4V5 671 aaPredicted RBP26.56■■□□□ 1.84
CLDND1-202ENST00000394180 PTMAP06454 111 aaKnown RBP26.55■■□□□ 1.84
CLDND1-202ENST00000394180 ATP2B3Q16720 1220 aa26.55■■□□□ 1.84
CLDND1-202ENST00000394180 DNTTIP2Q5QJE6 756 aaKnown RBP26.55■■□□□ 1.84
CLDND1-202ENST00000394180 TMEM94Q12767 1356 aa26.55■■□□□ 1.84
CLDND1-202ENST00000394180 TRIM27P14373 513 aa26.55■■□□□ 1.84
CLDND1-202ENST00000394180 ANKRD7Q92527 254 aa26.55■■□□□ 1.84
CLDND1-202ENST00000394180 SYAP1Q96A49 352 aaPredicted RBP26.55■■□□□ 1.84
CLDND1-202ENST00000394180 DIAPH3Q9NSV4 1193 aa26.55■■□□□ 1.84
CLDND1-202ENST00000394180 SYCP1Q15431 976 aa26.54■■□□□ 1.84
CLDND1-202ENST00000394180 TBC1D9Q6ZT07 1266 aa26.54■■□□□ 1.84
CLDND1-202ENST00000394180 PDCL2Q8N4E4 241 aa26.54■■□□□ 1.84
CLDND1-202ENST00000394180 SLC20A2Q08357 652 aa26.53■■□□□ 1.84
CLDND1-202ENST00000394180 IPO8O15397 1037 aaKnown RBP26.53■■□□□ 1.84
CLDND1-202ENST00000394180 PHF14O94880 888 aa26.53■■□□□ 1.84
CLDND1-202ENST00000394180 BCL2L13Q9BXK5 485 aa26.53■■□□□ 1.84
CLDND1-202ENST00000394180 FOXD4L1Q9NU39 408 aa26.53■■□□□ 1.84
CLDND1-202ENST00000394180 CDC42BPGQ6DT37 1551 aa26.52■■□□□ 1.84
CLDND1-202ENST00000394180 CDC45O75419 566 aa26.52■■□□□ 1.84
CLDND1-202ENST00000394180 ARID3AQ99856 593 aa26.52■■□□□ 1.84
CLDND1-202ENST00000394180 TSPY26PQ9H489 355 aa26.52■■□□□ 1.84
CLDND1-202ENST00000394180 TMEM63CQ9P1W3 806 aa26.52■■□□□ 1.84
CLDND1-202ENST00000394180 CPSF1Q10570 1443 aaKnown RBP26.52■■□□□ 1.84
CLDND1-202ENST00000394180 TOPAZ1Q8N9V7 1692 aa26.52■■□□□ 1.84
CLDND1-202ENST00000394180 FMN2Q9NZ56 1722 aa26.51■■□□□ 1.84
CLDND1-202ENST00000394180 PRPF40AO75400 957 aaKnown RBP26.51■■□□□ 1.83
CLDND1-202ENST00000394180 ITPRIPQ8IWB1 547 aa26.51■■□□□ 1.83
CLDND1-202ENST00000394180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.51■■□□□ 1.83
CLDND1-202ENST00000394180 ACEP12821 1306 aa26.51■■□□□ 1.83
CLDND1-202ENST00000394180 OGFRQ9NZT2 677 aa26.5■■□□□ 1.83
CLDND1-202ENST00000394180 IL16Q14005 1332 aa26.5■■□□□ 1.83
CLDND1-202ENST00000394180 FAM193AP78312 1265 aa26.49■■□□□ 1.83
CLDND1-202ENST00000394180 BCL2L12Q9HB09 334 aa26.49■■□□□ 1.83
CLDND1-202ENST00000394180 PLEKHG3A1L390 1219 aa26.49■■□□□ 1.83
CLDND1-202ENST00000394180 TPM3P06753 285 aa26.49■■□□□ 1.83
CLDND1-202ENST00000394180 SMC4Q9NTJ3 1288 aa26.49■■□□□ 1.83
CLDND1-202ENST00000394180 SYCE3A1L190 88 aa26.48■■□□□ 1.83
CLDND1-202ENST00000394180 CTIFO43310 598 aaKnown RBP26.48■■□□□ 1.83
CLDND1-202ENST00000394180 GGNBP2Q9H3C7 697 aa26.48■■□□□ 1.83
CLDND1-202ENST00000394180 C19orf44Q9H6X5 657 aa26.48■■□□□ 1.83
CLDND1-202ENST00000394180 LNPKQ9C0E8 428 aa26.47■■□□□ 1.83
CLDND1-202ENST00000394180 FYB1O15117 783 aa26.46■■□□□ 1.83
CLDND1-202ENST00000394180 ANKARQ7Z5J8 1434 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms