RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 SULT6B1Q6IMI4 303 aa16.08■□□□□ 0.16
MSH5-204ENST00000375755 PPP1R9BQ96SB3 815 aa16.08■□□□□ 0.16
MSH5-204ENST00000375755 CCDC173Q0VFZ6 552 aa16.07■□□□□ 0.16
MSH5-204ENST00000375755 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
MSH5-204ENST00000375755 MAP3K19Q56UN5 1328 aa16.07■□□□□ 0.16
MSH5-204ENST00000375755 CIZ1Q9ULV3 898 aaPredicted RBP16.07■□□□□ 0.16
MSH5-204ENST00000375755 OFD1O75665 1012 aa16.06■□□□□ 0.16
MSH5-204ENST00000375755 RBM25P49756 843 aaKnown RBP16.06■□□□□ 0.16
MSH5-204ENST00000375755 NLRP6P59044 892 aa16.06■□□□□ 0.16
MSH5-204ENST00000375755 NFE2L2Q16236 605 aa16.06■□□□□ 0.16
MSH5-204ENST00000375755 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
MSH5-204ENST00000375755 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
MSH5-204ENST00000375755 HSP90AB1P08238 724 aaKnown RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 NPHP4O75161 1426 aaPredicted RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 PIK3R4Q99570 1358 aa16.05■□□□□ 0.16
MSH5-204ENST00000375755 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 DZIP1LQ8IYY4 767 aaKnown RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 STRCQ7RTU9 1775 aa16.05■□□□□ 0.16
MSH5-204ENST00000375755 NASPP49321 788 aaPredicted RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 CALD1Q05682 793 aaKnown RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 ZKSCAN2Q63HK3 967 aa16.05■□□□□ 0.16
MSH5-204ENST00000375755 FTSJ3Q8IY81 847 aaKnown RBP16.05■□□□□ 0.16
MSH5-204ENST00000375755 ARID3AQ99856 593 aa16.05■□□□□ 0.16
MSH5-204ENST00000375755 FOXD4L1Q9NU39 408 aa16.05■□□□□ 0.16
MSH5-204ENST00000375755 USP31Q70CQ4 1352 aa16.04■□□□□ 0.16
MSH5-204ENST00000375755 SSH1Q8WYL5 1049 aa16.04■□□□□ 0.16
MSH5-204ENST00000375755 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
MSH5-204ENST00000375755 HDAC1Q13547 482 aaPredicted RBP16.04■□□□□ 0.16
MSH5-204ENST00000375755 ESCO1Q5FWF5 840 aa16.04■□□□□ 0.16
MSH5-204ENST00000375755 ABTB2Q8N961 1025 aa16.03■□□□□ 0.16
MSH5-204ENST00000375755 MARF1Q9Y4F3 1742 aaKnown RBP16.03■□□□□ 0.16
MSH5-204ENST00000375755 ORAI2Q96SN7 254 aa16.03■□□□□ 0.16
MSH5-204ENST00000375755 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
MSH5-204ENST00000375755 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
MSH5-204ENST00000375755 TTC21AQ8NDW8 1320 aa16.02■□□□□ 0.16
MSH5-204ENST00000375755 CD2BP2O95400 341 aaKnown RBP16.02■□□□□ 0.16
MSH5-204ENST00000375755 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
MSH5-204ENST00000375755 SMC4Q9NTJ3 1288 aa16.02■□□□□ 0.15
MSH5-204ENST00000375755 PRDM4Q9UKN5 801 aa16.02■□□□□ 0.15
MSH5-204ENST00000375755 FOXO3O43524 673 aa16.01■□□□□ 0.15
MSH5-204ENST00000375755 KIF2CQ99661 725 aa16.01■□□□□ 0.15
MSH5-204ENST00000375755 PTMSP20962 102 aa16.01■□□□□ 0.15
MSH5-204ENST00000375755 HSPA2P54652 639 aa16.01■□□□□ 0.15
MSH5-204ENST00000375755 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.01■□□□□ 0.15
MSH5-204ENST00000375755 SSFA2P28290 1259 aa16■□□□□ 0.15
MSH5-204ENST00000375755 LTV1Q96GA3 475 aaPredicted RBP16■□□□□ 0.15
MSH5-204ENST00000375755 ANKARQ7Z5J8 1434 aa16■□□□□ 0.15
MSH5-204ENST00000375755 MSNP26038 577 aaKnown RBP16■□□□□ 0.15
MSH5-204ENST00000375755 AMPHP49418 695 aa16■□□□□ 0.15
MSH5-204ENST00000375755 NWD1Q149M9 1564 aa16■□□□□ 0.15
MSH5-204ENST00000375755 MCM10Q7L590 875 aa16■□□□□ 0.15
MSH5-204ENST00000375755 TRIM27P14373 513 aa15.99■□□□□ 0.15
MSH5-204ENST00000375755 MBIPQ9NS73 344 aa15.99■□□□□ 0.15
MSH5-204ENST00000375755 IL16Q14005 1332 aa15.99■□□□□ 0.15
MSH5-204ENST00000375755 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
MSH5-204ENST00000375755 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
MSH5-204ENST00000375755 ZBTB7CA1YPR0 619 aa15.98■□□□□ 0.15
MSH5-204ENST00000375755 TERF1P54274 439 aa15.98■□□□□ 0.15
MSH5-204ENST00000375755 R3HCC1Q9Y3T6 440 aaKnown RBP15.98■□□□□ 0.15
MSH5-204ENST00000375755 ANP32BQ92688 251 aaKnown RBP15.98■□□□□ 0.15
MSH5-204ENST00000375755 FAM13BQ9NYF5 915 aa15.98■□□□□ 0.15
MSH5-204ENST00000375755 RGPD1P0DJD0 1748 aa15.98■□□□□ 0.15
MSH5-204ENST00000375755 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
MSH5-204ENST00000375755 KRT24Q2M2I5 525 aa15.98■□□□□ 0.15
MSH5-204ENST00000375755 EYA1Q99502 592 aa15.98■□□□□ 0.15
MSH5-204ENST00000375755 ADGRL3Q9HAR2 1447 aa15.97■□□□□ 0.15
MSH5-204ENST00000375755 DDX49Q9Y6V7 483 aaKnown RBP15.97■□□□□ 0.15
MSH5-204ENST00000375755 PSME1Q06323 249 aa15.97■□□□□ 0.15
MSH5-204ENST00000375755 KLHL40Q2TBA0 621 aa15.97■□□□□ 0.15
MSH5-204ENST00000375755 DDX19BQ9UMR2 479 aa15.97■□□□□ 0.15
MSH5-204ENST00000375755 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
MSH5-204ENST00000375755 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.15
MSH5-204ENST00000375755 RBM42Q9BTD8 480 aaKnown RBP15.96■□□□□ 0.15
MSH5-204ENST00000375755 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
MSH5-204ENST00000375755 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
MSH5-204ENST00000375755 K7ELQ4 463 aaPredicted RBP15.96■□□□□ 0.15
MSH5-204ENST00000375755 C8orf58Q8NAV2 365 aa15.96■□□□□ 0.15
MSH5-204ENST00000375755 GAS2L2Q8NHY3 880 aa15.96■□□□□ 0.15
MSH5-204ENST00000375755 DDX17Q92841 729 aaKnown RBP15.96■□□□□ 0.15
MSH5-204ENST00000375755 MIS18AQ9NYP9 233 aa15.96■□□□□ 0.15
MSH5-204ENST00000375755 SBNO1A3KN83 1393 aa15.96■□□□□ 0.14
MSH5-204ENST00000375755 FLT4P35916 1363 aa15.96■□□□□ 0.14
MSH5-204ENST00000375755 NUCB1Q02818 461 aa15.96■□□□□ 0.14
MSH5-204ENST00000375755 HOXC9P31274 260 aa15.95■□□□□ 0.14
MSH5-204ENST00000375755 BAG4O95429 457 aaKnown RBP15.95■□□□□ 0.14
MSH5-204ENST00000375755 ZNF853P0CG23 659 aa15.95■□□□□ 0.14
MSH5-204ENST00000375755 GOLGA6L22H0YM25 854 aa15.94■□□□□ 0.14
MSH5-204ENST00000375755 MTHFSDQ2M296 383 aaKnown RBP15.94■□□□□ 0.14
MSH5-204ENST00000375755 CLEC17AQ6ZS10 378 aa15.94■□□□□ 0.14
MSH5-204ENST00000375755 VAMP4O75379 141 aa15.94■□□□□ 0.14
MSH5-204ENST00000375755 LMOD2Q6P5Q4 547 aa15.94■□□□□ 0.14
MSH5-204ENST00000375755 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.94■□□□□ 0.14
MSH5-204ENST00000375755 ATF7IPQ6VMQ6 1270 aa15.93■□□□□ 0.14
MSH5-204ENST00000375755 TMEM57Q8N5G2 664 aa15.93■□□□□ 0.14
MSH5-204ENST00000375755 ZBTB40Q9NUA8 1239 aa15.93■□□□□ 0.14
MSH5-204ENST00000375755 MAP7D2Q96T17 732 aa15.93■□□□□ 0.14
MSH5-204ENST00000375755 IFT57Q9NWB7 429 aa15.93■□□□□ 0.14
MSH5-204ENST00000375755 ZNF445P59923 1031 aa15.92■□□□□ 0.14
MSH5-204ENST00000375755 NOL7Q9UMY1 257 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms