RNA–Protein interactions for RNA: ENST00000375669.7

TUBGCP3-202, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-202ENST00000375669 JARID2Q92833 1246 aaPredicted RBP21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 PRIMPOLQ96LW4 560 aa21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 LRRC7Q96NW7 1537 aa21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 CAMSAP1Q5T5Y3 1602 aa21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 NEURL4Q96JN8 1562 aa21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 PPLO60437 1756 aa21.93■■□□□ 1.1
TUBGCP3-202ENST00000375669 PPP4R3BQ5MIZ7 849 aa21.92■■□□□ 1.1
TUBGCP3-202ENST00000375669 NME9Q86XW9 330 aa21.92■■□□□ 1.1
TUBGCP3-202ENST00000375669 CWC22Q9HCG8 908 aaKnown RBP21.92■■□□□ 1.1
TUBGCP3-202ENST00000375669 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.92■■□□□ 1.14e-8■■■□□ 18.2
TUBGCP3-202ENST00000375669 USP32Q8NFA0 1604 aa21.92■■□□□ 1.1
TUBGCP3-202ENST00000375669 MED14O60244 1454 aa21.92■■□□□ 1.1
TUBGCP3-202ENST00000375669 CD163L1Q9NR16 1453 aa21.92■■□□□ 1.1
TUBGCP3-202ENST00000375669 GNAI1P63096 354 aa21.92■■□□□ 1.1
TUBGCP3-202ENST00000375669 KIDINS220Q9ULH0 1771 aa21.91■■□□□ 1.1
TUBGCP3-202ENST00000375669 TSC1Q92574 1164 aa21.91■■□□□ 1.1
TUBGCP3-202ENST00000375669 LETM1O95202 739 aaPredicted RBP21.9■■□□□ 1.1
TUBGCP3-202ENST00000375669 GTF2F1P35269 517 aaKnown RBP eCLIP21.9■■□□□ 1.13e-9■■■■■ 33.4
TUBGCP3-202ENST00000375669 HMGN5P82970 282 aaKnown RBP21.9■■□□□ 1.1
TUBGCP3-202ENST00000375669 DCTPP1Q9H773 170 aa21.9■■□□□ 1.1
TUBGCP3-202ENST00000375669 UHRF1BP1LA0JNW5 1464 aa21.9■■□□□ 1.1
TUBGCP3-202ENST00000375669 ARHGAP45Q92619 1136 aa21.89■■□□□ 1.1
TUBGCP3-202ENST00000375669 MEIS3Q99687 375 aa21.89■■□□□ 1.1
TUBGCP3-202ENST00000375669 GDPD2Q9HCC8 539 aa21.89■■□□□ 1.1
TUBGCP3-202ENST00000375669 MIS18AQ9NYP9 233 aa21.89■■□□□ 1.1
TUBGCP3-202ENST00000375669 PNPLA6Q8IY17 1366 aa21.89■■□□□ 1.09
TUBGCP3-202ENST00000375669 PUS7Q96PZ0 661 aaKnown RBP21.89■■□□□ 1.09
TUBGCP3-202ENST00000375669 DTNBO60941 627 aa21.88■■□□□ 1.09
TUBGCP3-202ENST00000375669 INTS3Q68E01 1043 aaKnown RBP21.88■■□□□ 1.09
TUBGCP3-202ENST00000375669 ARHGEF28Q8N1W1 1705 aaKnown RBP21.88■■□□□ 1.09
TUBGCP3-202ENST00000375669 FBXO31Q5XUX0 539 aaPredicted RBP21.88■■□□□ 1.09
TUBGCP3-202ENST00000375669 IFT57Q9NWB7 429 aa21.88■■□□□ 1.09
TUBGCP3-202ENST00000375669 ATP2B3Q16720 1220 aa21.87■■□□□ 1.09
TUBGCP3-202ENST00000375669 FAM135BQ49AJ0 1406 aa21.87■■□□□ 1.09
TUBGCP3-202ENST00000375669 MCM10Q7L590 875 aa21.87■■□□□ 1.09
TUBGCP3-202ENST00000375669 ABCA9Q8IUA7 1624 aa21.87■■□□□ 1.09
TUBGCP3-202ENST00000375669 ASXL2Q76L83 1435 aa21.87■■□□□ 1.09
TUBGCP3-202ENST00000375669 SOX12O15370 315 aa21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 NEK4P51957 841 aa21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 BRPF1P55201 1214 aaPredicted RBP21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 AEBP1Q8IUX7 1158 aa21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 BBXQ8WY36 941 aaPredicted RBP21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 ST18O60284 1047 aa21.86■■□□□ 1.09
TUBGCP3-202ENST00000375669 ZNF853P0CG23 659 aa21.85■■□□□ 1.09
TUBGCP3-202ENST00000375669 API5Q9BZZ5 524 aaKnown RBP21.85■■□□□ 1.09
TUBGCP3-202ENST00000375669 IL13P35225 146 aa21.85■■□□□ 1.09
TUBGCP3-202ENST00000375669 CEP85Q6P2H3 762 aa21.85■■□□□ 1.09
TUBGCP3-202ENST00000375669 PIBF1Q8WXW3 757 aa21.85■■□□□ 1.09
TUBGCP3-202ENST00000375669 CHMP4BQ9H444 224 aaKnown RBP21.85■■□□□ 1.09
TUBGCP3-202ENST00000375669 F6X3S4 739 aa21.84■■□□□ 1.09
TUBGCP3-202ENST00000375669 MBD3O95983 291 aa21.84■■□□□ 1.09
TUBGCP3-202ENST00000375669 NOLC1Q14978 699 aaKnown RBP eCLIP21.84■■□□□ 1.09
TUBGCP3-202ENST00000375669 ZNF428Q96B54 188 aa21.84■■□□□ 1.09
TUBGCP3-202ENST00000375669 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.09
TUBGCP3-202ENST00000375669 YTHDC2Q9H6S0 1430 aaKnown RBP21.83■■□□□ 1.09
TUBGCP3-202ENST00000375669 TSPY26PQ9H489 355 aa21.83■■□□□ 1.09
TUBGCP3-202ENST00000375669 KIF3AQ9Y496 699 aa21.83■■□□□ 1.09
TUBGCP3-202ENST00000375669 PIK3R4Q99570 1358 aa21.83■■□□□ 1.08
TUBGCP3-202ENST00000375669 STAG3Q9UJ98 1225 aa21.82■■□□□ 1.08
TUBGCP3-202ENST00000375669 REREQ9P2R6 1566 aa21.82■■□□□ 1.08
TUBGCP3-202ENST00000375669 ZNF830Q96NB3 372 aaPredicted RBP21.82■■□□□ 1.08
TUBGCP3-202ENST00000375669 EXOC6BQ9Y2D4 811 aa21.82■■□□□ 1.08
TUBGCP3-202ENST00000375669 PDE4CQ08493 712 aa21.81■■□□□ 1.08
TUBGCP3-202ENST00000375669 ANKRD44Q8N8A2 993 aa21.81■■□□□ 1.08
TUBGCP3-202ENST00000375669 GTF2E1P29083 439 aaPredicted RBP21.81■■□□□ 1.08
TUBGCP3-202ENST00000375669 PALD1Q9ULE6 856 aa21.81■■□□□ 1.08
TUBGCP3-202ENST00000375669 MSH6P52701 1360 aa21.81■■□□□ 1.08
TUBGCP3-202ENST00000375669 NEXMIFQ5QGS0 1516 aa21.8■■□□□ 1.08
TUBGCP3-202ENST00000375669 LMTK2Q8IWU2 1503 aa21.8■■□□□ 1.08
TUBGCP3-202ENST00000375669 TMX3Q96JJ7 454 aa21.8■■□□□ 1.08
TUBGCP3-202ENST00000375669 UPF3BQ9BZI7 483 aaKnown RBP21.8■■□□□ 1.08
TUBGCP3-202ENST00000375669 CASC1Q6TDU7 716 aa21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 LARP6Q9BRS8 491 aaKnown RBP21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 KNDC1Q76NI1 1749 aa21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 FAM177BA6PVY3 158 aa21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 PTPRMP28827 1452 aa21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 FRMPD1Q5SYB0 1578 aa21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 NUTM2FA1L443 756 aa21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 BCL2L12Q9HB09 334 aa21.79■■□□□ 1.08
TUBGCP3-202ENST00000375669 SIGLEC1Q9BZZ2 1709 aa21.78■■□□□ 1.08
TUBGCP3-202ENST00000375669 SLC4A2P04920 1241 aa21.78■■□□□ 1.08
TUBGCP3-202ENST00000375669 NECTIN2Q92692 538 aa21.78■■□□□ 1.08
TUBGCP3-202ENST00000375669 ABCC3O15438 1527 aa21.77■■□□□ 1.08
TUBGCP3-202ENST00000375669 SULT6B1Q6IMI4 303 aa21.77■■□□□ 1.08
TUBGCP3-202ENST00000375669 PDCL2Q8N4E4 241 aa21.77■■□□□ 1.08
TUBGCP3-202ENST00000375669 RILPL2Q969X0 211 aa21.77■■□□□ 1.08
TUBGCP3-202ENST00000375669 SPDYE4A6NLX3 237 aa21.77■■□□□ 1.07
TUBGCP3-202ENST00000375669 ERC2O15083 957 aa21.77■■□□□ 1.07
TUBGCP3-202ENST00000375669 GADD45BO75293 160 aaPredicted RBP21.77■■□□□ 1.07
TUBGCP3-202ENST00000375669 G2E3Q7L622 706 aa21.77■■□□□ 1.07
TUBGCP3-202ENST00000375669 C17orf53Q8N3J3 647 aaPredicted RBP21.77■■□□□ 1.07
TUBGCP3-202ENST00000375669 FKBP5Q13451 457 aaPredicted RBP21.76■■□□□ 1.07
TUBGCP3-202ENST00000375669 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.76■■□□□ 1.07
TUBGCP3-202ENST00000375669 ATP10DQ9P241 1426 aa21.76■■□□□ 1.07
TUBGCP3-202ENST00000375669 REC8O95072 547 aa21.75■■□□□ 1.07
TUBGCP3-202ENST00000375669 SPTLC3Q9NUV7 552 aa21.75■■□□□ 1.07
TUBGCP3-202ENST00000375669 RIMS2Q9UQ26 1411 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms