RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 TAF4BQ92750 862 aa18.89■□□□□ 0.61
RXRA-201ENST00000356384 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.61
RXRA-201ENST00000356384 EIF5P55010 431 aaKnown RBP18.89■□□□□ 0.61
RXRA-201ENST00000356384 TXNDC2Q86VQ3 553 aa18.89■□□□□ 0.61
RXRA-201ENST00000356384 JAKMIP1Q96N16 626 aaKnown RBP18.89■□□□□ 0.61
RXRA-201ENST00000356384 CDKL5O76039 1030 aa18.88■□□□□ 0.61
RXRA-201ENST00000356384 ZSCAN25Q6NSZ9 544 aa18.88■□□□□ 0.61
RXRA-201ENST00000356384 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
RXRA-201ENST00000356384 FGD6Q6ZV73 1430 aa18.88■□□□□ 0.61
RXRA-201ENST00000356384 DDX54Q8TDD1 881 aaKnown RBP18.88■□□□□ 0.61
RXRA-201ENST00000356384 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
RXRA-201ENST00000356384 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
RXRA-201ENST00000356384 EPB41L2O43491 1005 aaKnown RBP18.88■□□□□ 0.61
RXRA-201ENST00000356384 TDO2P48775 406 aa18.88■□□□□ 0.61
RXRA-201ENST00000356384 PRG4Q92954 1404 aaPredicted RBP18.87■□□□□ 0.61
RXRA-201ENST00000356384 CWC27Q6UX04 472 aaKnown RBP18.87■□□□□ 0.61
RXRA-201ENST00000356384 CFAP45Q9UL16 551 aa18.87■□□□□ 0.61
RXRA-201ENST00000356384 MYOM3Q5VTT5 1437 aa18.87■□□□□ 0.61
RXRA-201ENST00000356384 MPHOSPH10O00566 681 aaKnown RBP18.87■□□□□ 0.61
RXRA-201ENST00000356384 PIP4K2BP78356 416 aa18.87■□□□□ 0.61
RXRA-201ENST00000356384 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
RXRA-201ENST00000356384 ZNF76P36508 570 aa18.87■□□□□ 0.61
RXRA-201ENST00000356384 ZSCAN29Q8IWY8 852 aaPredicted RBP18.86■□□□□ 0.61
RXRA-201ENST00000356384 PKNOX2Q96KN3 472 aa18.86■□□□□ 0.61
RXRA-201ENST00000356384 INCENPQ9NQS7 918 aa18.86■□□□□ 0.61
RXRA-201ENST00000356384 CCDC97Q96F63 343 aaPredicted RBP18.86■□□□□ 0.61
RXRA-201ENST00000356384 ARHGAP29Q52LW3 1261 aa18.86■□□□□ 0.61
RXRA-201ENST00000356384 JAKMIP3Q5VZ66 844 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 AFAP1Q8N556 730 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 DESP17661 470 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 CFAP70Q5T0N1 1121 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 IBSPP21815 317 aaPredicted RBP18.85■□□□□ 0.61
RXRA-201ENST00000356384 NCOA2Q15596 1464 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 FYCO1Q9BQS8 1478 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 SMTNL1A8MU46 457 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 USP8P40818 1118 aa18.85■□□□□ 0.61
RXRA-201ENST00000356384 SPINK5Q9NQ38 1064 aaPredicted RBP18.85■□□□□ 0.61
RXRA-201ENST00000356384 SF3B2Q13435 895 aaKnown RBP18.84■□□□□ 0.61
RXRA-201ENST00000356384 ABCA10Q8WWZ4 1543 aa18.84■□□□□ 0.61
RXRA-201ENST00000356384 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
RXRA-201ENST00000356384 RAI14Q9P0K7 980 aa18.84■□□□□ 0.61
RXRA-201ENST00000356384 CFAP100Q494V2 611 aa18.84■□□□□ 0.61
RXRA-201ENST00000356384 ZSCAN31Q96LW9 406 aaPredicted RBP18.84■□□□□ 0.61
RXRA-201ENST00000356384 USP5P45974 858 aa18.84■□□□□ 0.61
RXRA-201ENST00000356384 SRGAP3O43295 1099 aa18.83■□□□□ 0.61
RXRA-201ENST00000356384 UBXN4Q92575 508 aa18.83■□□□□ 0.61
RXRA-201ENST00000356384 PPP6R1Q9UPN7 881 aa18.83■□□□□ 0.61
RXRA-201ENST00000356384 ZNF530Q6P9A1 599 aaPredicted RBP18.83■□□□□ 0.6
RXRA-201ENST00000356384 DDX11Q96FC9 970 aa18.83■□□□□ 0.6
RXRA-201ENST00000356384 IL1RAPL2Q9NP60 686 aa18.83■□□□□ 0.6
RXRA-201ENST00000356384 CTNNA3Q9UI47 895 aa18.83■□□□□ 0.6
RXRA-201ENST00000356384 CCDC148Q8NFR7 591 aa18.83■□□□□ 0.6
RXRA-201ENST00000356384 CAMK4Q16566 473 aa18.82■□□□□ 0.6
RXRA-201ENST00000356384 EFCAB5A4FU69 1503 aa18.82■□□□□ 0.6
RXRA-201ENST00000356384 PNISRQ8TF01 805 aaKnown RBP18.81■□□□□ 0.6
RXRA-201ENST00000356384 PRAM1Q96QH2 718 aa18.81■□□□□ 0.6
RXRA-201ENST00000356384 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
RXRA-201ENST00000356384 ATF7IPQ6VMQ6 1270 aa18.81■□□□□ 0.6
RXRA-201ENST00000356384 TOM1L2Q6ZVM7 507 aa18.81■□□□□ 0.6
RXRA-201ENST00000356384 CCDC113Q9H0I3 377 aa18.81■□□□□ 0.6
RXRA-201ENST00000356384 BACH2Q9BYV9 841 aa18.81■□□□□ 0.6
RXRA-201ENST00000356384 MVPQ14764 893 aaKnown RBP18.8■□□□□ 0.6
RXRA-201ENST00000356384 ZNF397Q8NF99 534 aaPredicted RBP18.8■□□□□ 0.6
RXRA-201ENST00000356384 CRACR2AQ9BSW2 395 aa18.8■□□□□ 0.6
RXRA-201ENST00000356384 CEP126Q9P2H0 1117 aa18.8■□□□□ 0.6
RXRA-201ENST00000356384 DYDC1Q8WWB3 177 aa18.8■□□□□ 0.6
RXRA-201ENST00000356384 WASF1Q92558 559 aa18.8■□□□□ 0.6
RXRA-201ENST00000356384 LRP2BPQ9P2M1 347 aa18.8■□□□□ 0.6
RXRA-201ENST00000356384 MAP3K11Q16584 847 aa18.8■□□□□ 0.6
RXRA-201ENST00000356384 ESPNB1AK53 854 aa18.79■□□□□ 0.6
RXRA-201ENST00000356384 PDCL2Q8N4E4 241 aa18.79■□□□□ 0.6
RXRA-201ENST00000356384 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
RXRA-201ENST00000356384 GOLGA6L10A0A0M3HER8 536 aa18.79■□□□□ 0.6
RXRA-201ENST00000356384 IDH1O75874 414 aaKnown RBP18.79■□□□□ 0.6
RXRA-201ENST00000356384 XPCQ01831 940 aaPredicted RBP18.79■□□□□ 0.6
RXRA-201ENST00000356384 MAP2K1Q02750 393 aaPredicted RBP18.79■□□□□ 0.6
RXRA-201ENST00000356384 KRT32Q14532 448 aa18.79■□□□□ 0.6
RXRA-201ENST00000356384 SYCE3A1L190 88 aa18.79■□□□□ 0.6
RXRA-201ENST00000356384 CCDC85AQ96PX6 553 aaPredicted RBP18.79■□□□□ 0.6
RXRA-201ENST00000356384 CASTP20810 708 aaKnown RBP18.79■□□□□ 0.6
RXRA-201ENST00000356384 MCM4P33991 863 aa18.79■□□□□ 0.6
RXRA-201ENST00000356384 CCDC91Q7Z6B0 441 aa18.78■□□□□ 0.6
RXRA-201ENST00000356384 TMCO3Q6UWJ1 677 aa18.78■□□□□ 0.6
RXRA-201ENST00000356384 POTEJP0CG39 1038 aa18.78■□□□□ 0.6
RXRA-201ENST00000356384 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
RXRA-201ENST00000356384 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
RXRA-201ENST00000356384 AKNAQ7Z591 1439 aa18.77■□□□□ 0.6
RXRA-201ENST00000356384 SPA17Q15506 151 aa18.77■□□□□ 0.6
RXRA-201ENST00000356384 CEP131Q9UPN4 1083 aa18.77■□□□□ 0.6
RXRA-201ENST00000356384 SLC26A8Q96RN1 970 aa18.77■□□□□ 0.6
RXRA-201ENST00000356384 SLC12A5Q9H2X9 1139 aa18.77■□□□□ 0.6
RXRA-201ENST00000356384 CETN2P41208 172 aa18.76■□□□□ 0.59
RXRA-201ENST00000356384 IMMTQ16891 758 aaKnown RBP18.76■□□□□ 0.59
RXRA-201ENST00000356384 NUTM1Q86Y26 1132 aa18.76■□□□□ 0.59
RXRA-201ENST00000356384 AIDAQ96BJ3 306 aa18.76■□□□□ 0.59
RXRA-201ENST00000356384 PPP1R12BO60237 982 aaPredicted RBP18.76■□□□□ 0.59
RXRA-201ENST00000356384 ANKRD50Q9ULJ7 1429 aa18.76■□□□□ 0.59
RXRA-201ENST00000356384 SHTN1A0MZ66 631 aa18.76■□□□□ 0.59
RXRA-201ENST00000356384 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
RXRA-201ENST00000356384 KLHL10Q6JEL2 608 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms