RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 KIAA0232Q92628 1395 aa18.83■□□□□ 0.6
TNFSF13-201ENST00000338784 IL27Q8NEV9 243 aa18.82■□□□□ 0.6
TNFSF13-201ENST00000338784 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
TNFSF13-201ENST00000338784 KLHL34Q8N239 644 aa18.82■□□□□ 0.6
TNFSF13-201ENST00000338784 AMOTL2Q9Y2J4 779 aa18.82■□□□□ 0.6
TNFSF13-201ENST00000338784 TTC21AQ8NDW8 1320 aa18.82■□□□□ 0.6
TNFSF13-201ENST00000338784 CHMP5Q9NZZ3 219 aa18.81■□□□□ 0.6
TNFSF13-201ENST00000338784 THEMISQ8N1K5 641 aaPredicted RBP18.81■□□□□ 0.6
TNFSF13-201ENST00000338784 ZNF142P52746 1687 aaPredicted RBP18.8■□□□□ 0.6
TNFSF13-201ENST00000338784 SOX12O15370 315 aa18.8■□□□□ 0.6
TNFSF13-201ENST00000338784 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
TNFSF13-201ENST00000338784 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
TNFSF13-201ENST00000338784 SNX21Q969T3 373 aa18.79■□□□□ 0.6
TNFSF13-201ENST00000338784 TBX22Q9Y458 520 aa18.79■□□□□ 0.6
TNFSF13-201ENST00000338784 DCTPP1Q9H773 170 aa18.79■□□□□ 0.6
TNFSF13-201ENST00000338784 NALCNQ8IZF0 1738 aa18.79■□□□□ 0.6
TNFSF13-201ENST00000338784 PEAK1Q9H792 1746 aa18.79■□□□□ 0.6
TNFSF13-201ENST00000338784 PTPRCP08575 1304 aa18.79■□□□□ 0.6
TNFSF13-201ENST00000338784 MAP3K19Q56UN5 1328 aa18.79■□□□□ 0.6
TNFSF13-201ENST00000338784 XRN1Q8IZH2 1706 aaKnown RBP18.78■□□□□ 0.6
TNFSF13-201ENST00000338784 TBC1D9Q6ZT07 1266 aa18.78■□□□□ 0.6
TNFSF13-201ENST00000338784 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
TNFSF13-201ENST00000338784 RGS12O14924 1447 aa18.77■□□□□ 0.6
TNFSF13-201ENST00000338784 CRB1P82279 1406 aa18.77■□□□□ 0.6
TNFSF13-201ENST00000338784 SBNO1A3KN83 1393 aa18.77■□□□□ 0.59
TNFSF13-201ENST00000338784 FLT4P35916 1363 aa18.77■□□□□ 0.59
TNFSF13-201ENST00000338784 RPAP2Q8IXW5 612 aaPredicted RBP18.77■□□□□ 0.59
TNFSF13-201ENST00000338784 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.59
TNFSF13-201ENST00000338784 RGPD1P0DJD0 1748 aa18.76■□□□□ 0.59
TNFSF13-201ENST00000338784 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
TNFSF13-201ENST00000338784 RTF1Q92541 710 aaKnown RBP18.76■□□□□ 0.59
TNFSF13-201ENST00000338784 CDC45O75419 566 aa18.75■□□□□ 0.59
TNFSF13-201ENST00000338784 MCM4P33991 863 aa18.75■□□□□ 0.59
TNFSF13-201ENST00000338784 MTHFSDQ2M296 383 aaKnown RBP18.75■□□□□ 0.59
TNFSF13-201ENST00000338784 PLEKHM2Q8IWE5 1019 aa18.74■□□□□ 0.59
TNFSF13-201ENST00000338784 NCOA3Q9Y6Q9 1424 aa18.74■□□□□ 0.59
TNFSF13-201ENST00000338784 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
TNFSF13-201ENST00000338784 AMPHP49418 695 aa18.73■□□□□ 0.59
TNFSF13-201ENST00000338784 ATP10DQ9P241 1426 aa18.73■□□□□ 0.59
TNFSF13-201ENST00000338784 KDRP35968 1356 aa18.73■□□□□ 0.59
TNFSF13-201ENST00000338784 FOXO3O43524 673 aa18.73■□□□□ 0.59
TNFSF13-201ENST00000338784 CEP85Q6P2H3 762 aa18.73■□□□□ 0.59
TNFSF13-201ENST00000338784 KIF2CQ99661 725 aa18.73■□□□□ 0.59
TNFSF13-201ENST00000338784 GSPT1P15170 499 aaKnown RBP18.72■□□□□ 0.59
TNFSF13-201ENST00000338784 MIS18AQ9NYP9 233 aa18.72■□□□□ 0.59
TNFSF13-201ENST00000338784 TSPYL4Q9UJ04 414 aa18.72■□□□□ 0.59
TNFSF13-201ENST00000338784 MSH6P52701 1360 aa18.72■□□□□ 0.59
TNFSF13-201ENST00000338784 GAS2L2Q8NHY3 880 aa18.72■□□□□ 0.59
TNFSF13-201ENST00000338784 RTL1A6NKG5 1358 aa18.71■□□□□ 0.59
TNFSF13-201ENST00000338784 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
TNFSF13-201ENST00000338784 IGSF1Q8N6C5 1336 aa18.71■□□□□ 0.59
TNFSF13-201ENST00000338784 DDIT3P35638 169 aa18.71■□□□□ 0.59
TNFSF13-201ENST00000338784 EYA1Q99502 592 aa18.71■□□□□ 0.59
TNFSF13-201ENST00000338784 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
TNFSF13-201ENST00000338784 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
TNFSF13-201ENST00000338784 TTC22Q5TAA0 569 aa18.7■□□□□ 0.58
TNFSF13-201ENST00000338784 MEIS3Q99687 375 aa18.7■□□□□ 0.58
TNFSF13-201ENST00000338784 TULP1O00294 542 aaPredicted RBP18.68■□□□□ 0.58
TNFSF13-201ENST00000338784 HTATSF1O43719 755 aaKnown RBP18.68■□□□□ 0.58
TNFSF13-201ENST00000338784 NLRP6P59044 892 aa18.68■□□□□ 0.58
TNFSF13-201ENST00000338784 C16orf71Q8IYS4 520 aaPredicted RBP18.68■□□□□ 0.58
TNFSF13-201ENST00000338784 CIZ1Q9ULV3 898 aaPredicted RBP18.68■□□□□ 0.58
TNFSF13-201ENST00000338784 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
TNFSF13-201ENST00000338784 L1TD1Q5T7N2 865 aaKnown RBP18.67■□□□□ 0.58
TNFSF13-201ENST00000338784 HMMRO75330 724 aa18.66■□□□□ 0.58
TNFSF13-201ENST00000338784 KCNA4P22459 653 aa18.66■□□□□ 0.58
TNFSF13-201ENST00000338784 ANKARQ7Z5J8 1434 aa18.66■□□□□ 0.58
TNFSF13-201ENST00000338784 DDX11L8A8MPP1 907 aa18.66■□□□□ 0.58
TNFSF13-201ENST00000338784 K7ELQ4 463 aaPredicted RBP18.66■□□□□ 0.58
TNFSF13-201ENST00000338784 SLC4A10Q6U841 1118 aa18.65■□□□□ 0.58
TNFSF13-201ENST00000338784 G2E3Q7L622 706 aa18.65■□□□□ 0.58
TNFSF13-201ENST00000338784 FMN2Q9NZ56 1722 aa18.65■□□□□ 0.58
TNFSF13-201ENST00000338784 TRAK2O60296 914 aa18.64■□□□□ 0.58
TNFSF13-201ENST00000338784 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.58
TNFSF13-201ENST00000338784 HOMEZQ8IX15 550 aa18.64■□□□□ 0.58
TNFSF13-201ENST00000338784 STK31Q9BXU1 1019 aa18.64■□□□□ 0.58
TNFSF13-201ENST00000338784 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
TNFSF13-201ENST00000338784 GNAT3A8MTJ3 354 aa18.64■□□□□ 0.57
TNFSF13-201ENST00000338784 CD2BP2O95400 341 aaKnown RBP18.64■□□□□ 0.57
TNFSF13-201ENST00000338784 HOXC9P31274 260 aa18.64■□□□□ 0.57
TNFSF13-201ENST00000338784 OTUD7AQ8TE49 926 aaPredicted RBP18.64■□□□□ 0.57
TNFSF13-201ENST00000338784 CHD2O14647 1828 aaKnown RBP18.64■□□□□ 0.57
TNFSF13-201ENST00000338784 F6X3S4 739 aa18.63■□□□□ 0.57
TNFSF13-201ENST00000338784 KCNA6P17658 529 aa18.63■□□□□ 0.57
TNFSF13-201ENST00000338784 RBM42Q9BTD8 480 aaKnown RBP18.63■□□□□ 0.57
TNFSF13-201ENST00000338784 APBB1O00213 710 aa18.62■□□□□ 0.57
TNFSF13-201ENST00000338784 SMARCA5O60264 1052 aaPredicted RBP18.62■□□□□ 0.57
TNFSF13-201ENST00000338784 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
TNFSF13-201ENST00000338784 TNPO1Q92973 898 aaKnown RBP18.62■□□□□ 0.57
TNFSF13-201ENST00000338784 SDSP20132 328 aa18.61■□□□□ 0.57
TNFSF13-201ENST00000338784 RAB3GAP1Q15042 981 aa18.61■□□□□ 0.57
TNFSF13-201ENST00000338784 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
TNFSF13-201ENST00000338784 NUTM2GQ5VZR2 741 aa18.61■□□□□ 0.57
TNFSF13-201ENST00000338784 ABTB2Q8N961 1025 aa18.61■□□□□ 0.57
TNFSF13-201ENST00000338784 RABEP1Q15276 862 aa18.61■□□□□ 0.57
TNFSF13-201ENST00000338784 USP26Q9BXU7 913 aa18.61■□□□□ 0.57
TNFSF13-201ENST00000338784 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
TNFSF13-201ENST00000338784 GOLGA6L3A6NEY3 463 aa18.6■□□□□ 0.57
TNFSF13-201ENST00000338784 GNAI2P04899 355 aa18.6■□□□□ 0.57
TNFSF13-201ENST00000338784 GBP4Q96PP9 640 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms