RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 MS4A1P11836 297 aa16.69■□□□□ 0.26
CPNE1-201ENST00000317677 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
CPNE1-201ENST00000317677 RLBP1P12271 317 aa16.68■□□□□ 0.26
CPNE1-201ENST00000317677 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
CPNE1-201ENST00000317677 KRT28Q7Z3Y7 464 aa16.68■□□□□ 0.26
CPNE1-201ENST00000317677 FRAT1Q92837 279 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-201ENST00000317677 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
CPNE1-201ENST00000317677 USP19O94966 1318 aa16.67■□□□□ 0.26
CPNE1-201ENST00000317677 MEX3CQ5U5Q3 659 aaKnown RBP16.67■□□□□ 0.26
CPNE1-201ENST00000317677 SSH1Q8WYL5 1049 aa16.67■□□□□ 0.26
CPNE1-201ENST00000317677 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
CPNE1-201ENST00000317677 IFT57Q9NWB7 429 aa16.67■□□□□ 0.26
CPNE1-201ENST00000317677 IP6K1Q92551 441 aa16.66■□□□□ 0.26
CPNE1-201ENST00000317677 MBIPQ9NS73 344 aa16.66■□□□□ 0.26
CPNE1-201ENST00000317677 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
CPNE1-201ENST00000317677 MTHFSDQ2M296 383 aaKnown RBP16.66■□□□□ 0.26
CPNE1-201ENST00000317677 DDRGK1Q96HY6 314 aa16.66■□□□□ 0.26
CPNE1-201ENST00000317677 ZMYND15Q9H091 742 aa16.66■□□□□ 0.26
CPNE1-201ENST00000317677 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
CPNE1-201ENST00000317677 LTV1Q96GA3 475 aaPredicted RBP16.65■□□□□ 0.26
CPNE1-201ENST00000317677 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
CPNE1-201ENST00000317677 GNAI1P63096 354 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 TSPYL6Q8N831 410 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 RGS17Q9UGC6 210 aaPredicted RBP16.64■□□□□ 0.25
CPNE1-201ENST00000317677 LRRC37A3O60309 1634 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 RGPD5Q99666 1765 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 GCP02774 474 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
CPNE1-201ENST00000317677 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
CPNE1-201ENST00000317677 MCM10Q7L590 875 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 KCNH5Q8NCM2 988 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 BACH2Q9BYV9 841 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 CRB1P82279 1406 aa16.64■□□□□ 0.25
CPNE1-201ENST00000317677 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
CPNE1-201ENST00000317677 ARHGEF25Q86VW2 580 aa16.63■□□□□ 0.25
CPNE1-201ENST00000317677 SMC4Q9NTJ3 1288 aa16.63■□□□□ 0.25
CPNE1-201ENST00000317677 PXDNQ92626 1479 aa16.62■□□□□ 0.25
CPNE1-201ENST00000317677 PDE4AP27815 886 aa16.62■□□□□ 0.25
CPNE1-201ENST00000317677 USHBP1Q8N6Y0 703 aa16.62■□□□□ 0.25
CPNE1-201ENST00000317677 NPHP3Q7Z494 1330 aa16.62■□□□□ 0.25
CPNE1-201ENST00000317677 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-201ENST00000317677 NUTM2EB1AL46 878 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-201ENST00000317677 VAMP4O75379 141 aa16.62■□□□□ 0.25
CPNE1-201ENST00000317677 PLEKHG5O94827 1062 aa16.62■□□□□ 0.25
CPNE1-201ENST00000317677 NUTM2AQ8IVF1 878 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-201ENST00000317677 CAMTA1Q9Y6Y1 1673 aa16.61■□□□□ 0.25
CPNE1-201ENST00000317677 LRP6O75581 1613 aa16.61■□□□□ 0.25
CPNE1-201ENST00000317677 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
CPNE1-201ENST00000317677 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
CPNE1-201ENST00000317677 NFKBIBQ15653 356 aa16.6■□□□□ 0.25
CPNE1-201ENST00000317677 NBPF6Q5VWK0 638 aa16.6■□□□□ 0.25
CPNE1-201ENST00000317677 LMOD2Q6P5Q4 547 aa16.6■□□□□ 0.25
CPNE1-201ENST00000317677 C8orf58Q8NAV2 365 aa16.6■□□□□ 0.25
CPNE1-201ENST00000317677 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
CPNE1-201ENST00000317677 NBPF4Q96M43 638 aa16.6■□□□□ 0.25
CPNE1-201ENST00000317677 ZKSCAN2Q63HK3 967 aa16.6■□□□□ 0.25
CPNE1-201ENST00000317677 DAXXQ9UER7 740 aaPredicted RBP16.6■□□□□ 0.25
CPNE1-201ENST00000317677 ZBTB7CA1YPR0 619 aa16.59■□□□□ 0.25
CPNE1-201ENST00000317677 TRIM27P14373 513 aa16.59■□□□□ 0.25
CPNE1-201ENST00000317677 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
CPNE1-201ENST00000317677 NCAPD2Q15021 1401 aa16.59■□□□□ 0.25
CPNE1-201ENST00000317677 COL18A1P39060 1754 aa16.59■□□□□ 0.25
CPNE1-201ENST00000317677 CHL1O00533 1208 aa16.58■□□□□ 0.25
CPNE1-201ENST00000317677 ALDH1L2Q3SY69 923 aa16.58■□□□□ 0.25
CPNE1-201ENST00000317677 NOB1Q9ULX3 412 aaKnown RBP16.58■□□□□ 0.25
CPNE1-201ENST00000317677 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
CPNE1-201ENST00000317677 AXIN2Q9Y2T1 843 aa16.58■□□□□ 0.24
CPNE1-201ENST00000317677 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
CPNE1-201ENST00000317677 TNS3Q68CZ2 1445 aa16.57■□□□□ 0.24
CPNE1-201ENST00000317677 POTEAQ6S8J7 498 aa16.57■□□□□ 0.24
CPNE1-201ENST00000317677 LMO7Q8WWI1 1683 aa16.57■□□□□ 0.24
CPNE1-201ENST00000317677 BRPF1P55201 1214 aaPredicted RBP16.57■□□□□ 0.24
CPNE1-201ENST00000317677 MRPL50Q8N5N7 158 aaKnown RBP16.57■□□□□ 0.24
CPNE1-201ENST00000317677 GAS2L2Q8NHY3 880 aa16.57■□□□□ 0.24
CPNE1-201ENST00000317677 TWISTNBQ3B726 338 aaPredicted RBP16.56■□□□□ 0.24
CPNE1-201ENST00000317677 ATF7IPQ6VMQ6 1270 aa16.56■□□□□ 0.24
CPNE1-201ENST00000317677 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
CPNE1-201ENST00000317677 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
CPNE1-201ENST00000317677 RRP9O43818 475 aaKnown RBP16.55■□□□□ 0.24
CPNE1-201ENST00000317677 IGHDP01880 384 aa16.55■□□□□ 0.24
CPNE1-201ENST00000317677 MVPQ14764 893 aaKnown RBP16.55■□□□□ 0.24
CPNE1-201ENST00000317677 PODXL2Q9NZ53 605 aa16.55■□□□□ 0.24
CPNE1-201ENST00000317677 CENPQQ7L2Z9 268 aaPredicted RBP16.55■□□□□ 0.24
CPNE1-201ENST00000317677 ZNF428Q96B54 188 aa16.55■□□□□ 0.24
CPNE1-201ENST00000317677 NPM2Q86SE8 214 aaKnown RBP16.54■□□□□ 0.24
CPNE1-201ENST00000317677 MIS18AQ9NYP9 233 aa16.54■□□□□ 0.24
CPNE1-201ENST00000317677 COL22A1Q8NFW1 1626 aaPredicted RBP16.54■□□□□ 0.24
CPNE1-201ENST00000317677 SPATA31A3Q5VYP0 1347 aa16.54■□□□□ 0.24
CPNE1-201ENST00000317677 KIF16BQ96L93 1317 aa16.54■□□□□ 0.24
CPNE1-201ENST00000317677 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
CPNE1-201ENST00000317677 ZC3H6P61129 1189 aaKnown RBP16.53■□□□□ 0.24
CPNE1-201ENST00000317677 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
CPNE1-201ENST00000317677 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
CPNE1-201ENST00000317677 IL17REQ8NFR9 667 aa16.53■□□□□ 0.24
CPNE1-201ENST00000317677 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
CPNE1-201ENST00000317677 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
CPNE1-201ENST00000317677 KIAA0232Q92628 1395 aa16.52■□□□□ 0.24
CPNE1-201ENST00000317677 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.24
CPNE1-201ENST00000317677 GNAT3A8MTJ3 354 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms