RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 TNS3Q68CZ2 1445 aa8.21□□□□□ -1.09
SSX3-201ENST00000298396 SPDYE16A6NNV3 312 aaPredicted RBP8.21□□□□□ -1.1
SSX3-201ENST00000298396 CARD14Q9BXL6 1004 aa8.21□□□□□ -1.1
SSX3-201ENST00000298396 NPHP3Q7Z494 1330 aa8.21□□□□□ -1.1
SSX3-201ENST00000298396 SBNO1A3KN83 1393 aa8.21□□□□□ -1.1
SSX3-201ENST00000298396 PNPLA6Q8IY17 1366 aa8.21□□□□□ -1.1
SSX3-201ENST00000298396 COL18A1P39060 1754 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 TESPA1A2RU30 521 aaPredicted RBP8.2□□□□□ -1.1
SSX3-201ENST00000298396 DPYSL4O14531 572 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 NBR1Q14596 966 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 KRT28Q7Z3Y7 464 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 NGDNQ8NEJ9 315 aaKnown RBP8.2□□□□□ -1.1
SSX3-201ENST00000298396 TMC1Q8TDI8 760 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 LRP6O75581 1613 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 SPATA31A3Q5VYP0 1347 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 KTN1Q86UP2 1357 aaKnown RBP8.2□□□□□ -1.1
SSX3-201ENST00000298396 EDC4Q6P2E9 1401 aaKnown RBP8.2□□□□□ -1.1
SSX3-201ENST00000298396 NSD3Q9BZ95 1437 aa8.2□□□□□ -1.1
SSX3-201ENST00000298396 SLIT3O75094 1523 aa8.19□□□□□ -1.1
SSX3-201ENST00000298396 NFAT5O94916 1531 aa8.19□□□□□ -1.1
SSX3-201ENST00000298396 PLCH1Q4KWH8 1693 aa8.19□□□□□ -1.1
SSX3-201ENST00000298396 CDCA8Q53HL2 280 aa8.19□□□□□ -1.1
SSX3-201ENST00000298396 POLR3GLQ9BT43 218 aa8.19□□□□□ -1.1
SSX3-201ENST00000298396 TTC21BQ7Z4L5 1316 aa8.19□□□□□ -1.1
SSX3-201ENST00000298396 PEAK1Q9H792 1746 aa8.18□□□□□ -1.1
SSX3-201ENST00000298396 PSME1Q06323 249 aa8.18□□□□□ -1.1
SSX3-201ENST00000298396 ANO8Q9HCE9 1232 aaPredicted RBP8.18□□□□□ -1.1
SSX3-201ENST00000298396 ZSWIM6Q9HCJ5 1215 aa8.18□□□□□ -1.1
SSX3-201ENST00000298396 BRD4O60885 1362 aaPredicted RBP8.18□□□□□ -1.1
SSX3-201ENST00000298396 OVOS2A0A0J9YW53 1432 aa8.18□□□□□ -1.1
SSX3-201ENST00000298396 OVOS2Q6IE36 1432 aa8.18□□□□□ -1.1
SSX3-201ENST00000298396 LMO7Q8WWI1 1683 aa8.18□□□□□ -1.1
SSX3-201ENST00000298396 NRAPQ86VF7 1730 aa8.17□□□□□ -1.1
SSX3-201ENST00000298396 RGPD2P0DJD1 1756 aa8.17□□□□□ -1.1
SSX3-201ENST00000298396 PER1O15534 1290 aaPredicted RBP8.17□□□□□ -1.1
SSX3-201ENST00000298396 NME9Q86XW9 330 aa8.17□□□□□ -1.1
SSX3-201ENST00000298396 PANK3Q9H999 370 aa8.17□□□□□ -1.1
SSX3-201ENST00000298396 JCADQ9P266 1359 aa8.17□□□□□ -1.1
SSX3-201ENST00000298396 ZNF316A6NFI3 1004 aaPredicted RBP8.16□□□□□ -1.1
SSX3-201ENST00000298396 USP19O94966 1318 aa8.16□□□□□ -1.1
SSX3-201ENST00000298396 PTGER2P43116 358 aa8.16□□□□□ -1.1
SSX3-201ENST00000298396 DOK7Q18PE1 504 aa8.16□□□□□ -1.1
SSX3-201ENST00000298396 NUTM2GQ5VZR2 741 aa8.16□□□□□ -1.1
SSX3-201ENST00000298396 USP31Q70CQ4 1352 aa8.16□□□□□ -1.1
SSX3-201ENST00000298396 TERF2IPQ9NYB0 399 aa8.16□□□□□ -1.1
SSX3-201ENST00000298396 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.15□□□□□ -1.1
SSX3-201ENST00000298396 NWD2Q9ULI1 1742 aa8.15□□□□□ -1.1
SSX3-201ENST00000298396 ARHGEF10O15013 1369 aa8.15□□□□□ -1.1
SSX3-201ENST00000298396 TTC21AQ8NDW8 1320 aa8.15□□□□□ -1.1
SSX3-201ENST00000298396 SEMA3EO15041 775 aa8.15□□□□□ -1.1
SSX3-201ENST00000298396 HDGFL2Q7Z4V5 671 aaPredicted RBP8.15□□□□□ -1.1
SSX3-201ENST00000298396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.15□□□□□ -1.1
SSX3-201ENST00000298396 LRRC59Q96AG4 307 aaKnown RBP8.15□□□□□ -1.1
SSX3-201ENST00000298396 PCDHGA4Q9Y5G9 962 aa8.15□□□□□ -1.1
SSX3-201ENST00000298396 COL14A1Q05707 1796 aaKnown RBP8.15□□□□□ -1.11
SSX3-201ENST00000298396 FYB1O15117 783 aa8.14□□□□□ -1.11
SSX3-201ENST00000298396 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
SSX3-201ENST00000298396 GPR153Q6NV75 609 aa8.14□□□□□ -1.11
SSX3-201ENST00000298396 CABLES1Q8TDN4 633 aa8.14□□□□□ -1.11
SSX3-201ENST00000298396 UPF1Q92900 1129 aaKnown RBP eCLIP8.14□□□□□ -1.11
SSX3-201ENST00000298396 WNK3Q9BYP7 1800 aa8.13□□□□□ -1.11
SSX3-201ENST00000298396 POTEMA6NI47 508 aa8.13□□□□□ -1.11
SSX3-201ENST00000298396 SNPHO15079 494 aa8.13□□□□□ -1.11
SSX3-201ENST00000298396 TBC1D12O60347 775 aa8.13□□□□□ -1.11
SSX3-201ENST00000298396 ABTB2Q8N961 1025 aa8.13□□□□□ -1.11
SSX3-201ENST00000298396 FBLN1P23142 703 aa8.12□□□□□ -1.11
SSX3-201ENST00000298396 DDX10Q13206 875 aaKnown RBP8.12□□□□□ -1.11
SSX3-201ENST00000298396 LMOD2Q6P5Q4 547 aa8.12□□□□□ -1.11
SSX3-201ENST00000298396 GGNBP2Q9H3C7 697 aa8.12□□□□□ -1.11
SSX3-201ENST00000298396 NPC1L1Q9UHC9 1359 aa8.11□□□□□ -1.11
SSX3-201ENST00000298396 SPATA31A6Q5VVP1 1343 aa8.11□□□□□ -1.11
SSX3-201ENST00000298396 EVI5O60447 810 aa8.11□□□□□ -1.11
SSX3-201ENST00000298396 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.11□□□□□ -1.11
SSX3-201ENST00000298396 CAMTA1Q9Y6Y1 1673 aa8.11□□□□□ -1.11
SSX3-201ENST00000298396 CGNL1Q0VF96 1302 aa8.1□□□□□ -1.11
SSX3-201ENST00000298396 SLIT2O94813 1529 aa8.1□□□□□ -1.11
SSX3-201ENST00000298396 ABCC6O95255 1503 aa8.1□□□□□ -1.11
SSX3-201ENST00000298396 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
SSX3-201ENST00000298396 SMG6Q86US8 1419 aaKnown RBP8.1□□□□□ -1.11
SSX3-201ENST00000298396 CPDO75976 1380 aa8.1□□□□□ -1.11
SSX3-201ENST00000298396 NSD2O96028 1365 aa8.1□□□□□ -1.11
SSX3-201ENST00000298396 KIAA0232Q92628 1395 aa8.1□□□□□ -1.11
SSX3-201ENST00000298396 RGPD1P0DJD0 1748 aa8.09□□□□□ -1.11
SSX3-201ENST00000298396 FAM208AQ9UK61 1670 aaKnown RBP8.09□□□□□ -1.11
SSX3-201ENST00000298396 NUTM2BA6NNL0 878 aaPredicted RBP8.09□□□□□ -1.11
SSX3-201ENST00000298396 NUTM2EB1AL46 878 aaPredicted RBP8.09□□□□□ -1.11
SSX3-201ENST00000298396 RIMBP2O15034 1052 aa8.09□□□□□ -1.11
SSX3-201ENST00000298396 GCP02774 474 aa8.09□□□□□ -1.11
SSX3-201ENST00000298396 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
SSX3-201ENST00000298396 POTEGQ6S5H5 508 aa8.09□□□□□ -1.11
SSX3-201ENST00000298396 NLRP13Q86W25 1043 aa8.09□□□□□ -1.11
SSX3-201ENST00000298396 NUTM2AQ8IVF1 878 aaPredicted RBP8.09□□□□□ -1.11
SSX3-201ENST00000298396 KNSTRNQ9Y448 316 aa8.09□□□□□ -1.11
SSX3-201ENST00000298396 BRWD3Q6RI45 1802 aa8.08□□□□□ -1.12
SSX3-201ENST00000298396 BCL9LQ86UU0 1499 aa8.08□□□□□ -1.12
SSX3-201ENST00000298396 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
SSX3-201ENST00000298396 CC2D1BQ5T0F9 858 aaKnown RBP8.08□□□□□ -1.12
SSX3-201ENST00000298396 ARHGEF25Q86VW2 580 aa8.08□□□□□ -1.12
SSX3-201ENST00000298396 PARD3Q8TEW0 1356 aa8.08□□□□□ -1.12
SSX3-201ENST00000298396 VIRMAQ69YN4 1812 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms