RNA–Protein interactions for RNA: ENST00000250241.12

ILF3-201, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-201ENST00000250241 ARHGAP23Q9P227 1491 aa16.23■□□□□ 0.19
ILF3-201ENST00000250241 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
ILF3-201ENST00000250241 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
ILF3-201ENST00000250241 SLIT1O75093 1534 aa16.23■□□□□ 0.19
ILF3-201ENST00000250241 ITSN1Q15811 1721 aa16.23■□□□□ 0.19
ILF3-201ENST00000250241 TSPYL6Q8N831 410 aa16.23■□□□□ 0.19
ILF3-201ENST00000250241 ISY1Q9ULR0 285 aaKnown RBP16.23■□□□□ 0.19
ILF3-201ENST00000250241 MAP3K19Q56UN5 1328 aa16.22■□□□□ 0.19
ILF3-201ENST00000250241 DMTNQ08495 405 aa16.22■□□□□ 0.19
ILF3-201ENST00000250241 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.22■□□□□ 0.19
ILF3-201ENST00000250241 MCM10Q7L590 875 aa16.22■□□□□ 0.19
ILF3-201ENST00000250241 PAXIP1Q6ZW49 1069 aaPredicted RBP16.21■□□□□ 0.19
ILF3-201ENST00000250241 ADGRB2O60241 1585 aa16.21■□□□□ 0.19
ILF3-201ENST00000250241 TRIM27P14373 513 aa16.21■□□□□ 0.19
ILF3-201ENST00000250241 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
ILF3-201ENST00000250241 OFD1O75665 1012 aa16.21■□□□□ 0.18
ILF3-201ENST00000250241 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
ILF3-201ENST00000250241 RGPD8O14715 1765 aaPredicted RBP16.2■□□□□ 0.18
ILF3-201ENST00000250241 FOXO3O43524 673 aa16.2■□□□□ 0.18
ILF3-201ENST00000250241 HSP90AB1P08238 724 aaKnown RBP16.2■□□□□ 0.18
ILF3-201ENST00000250241 TNPO1Q92973 898 aaKnown RBP16.2■□□□□ 0.18
ILF3-201ENST00000250241 MBIPQ9NS73 344 aa16.2■□□□□ 0.18
ILF3-201ENST00000250241 MIS18AQ9NYP9 233 aa16.2■□□□□ 0.18
ILF3-201ENST00000250241 PRDM10Q9NQV6 1147 aa16.19■□□□□ 0.18
ILF3-201ENST00000250241 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
ILF3-201ENST00000250241 RWDD1Q9H446 243 aaPredicted RBP16.19■□□□□ 0.18
ILF3-201ENST00000250241 CDK12Q9NYV4 1490 aaPredicted RBP16.19■□□□□ 0.18
ILF3-201ENST00000250241 PSME1Q06323 249 aa16.19■□□□□ 0.18
ILF3-201ENST00000250241 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
ILF3-201ENST00000250241 MON2Q7Z3U7 1717 aa16.18■□□□□ 0.18
ILF3-201ENST00000250241 MVPQ14764 893 aaKnown RBP16.18■□□□□ 0.18
ILF3-201ENST00000250241 GNAI1P63096 354 aa16.18■□□□□ 0.18
ILF3-201ENST00000250241 ATF7IPQ6VMQ6 1270 aa16.18■□□□□ 0.18
ILF3-201ENST00000250241 TMEM57Q8N5G2 664 aa16.18■□□□□ 0.18
ILF3-201ENST00000250241 DIP2AQ14689 1571 aa16.18■□□□□ 0.18
ILF3-201ENST00000250241 PPP4R3BQ5MIZ7 849 aa16.17■□□□□ 0.18
ILF3-201ENST00000250241 USHBP1Q8N6Y0 703 aa16.17■□□□□ 0.18
ILF3-201ENST00000250241 IL16Q14005 1332 aa16.17■□□□□ 0.18
ILF3-201ENST00000250241 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
ILF3-201ENST00000250241 AKAP12Q02952 1782 aa16.17■□□□□ 0.18
ILF3-201ENST00000250241 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
ILF3-201ENST00000250241 PTCH1Q13635 1447 aa16.16■□□□□ 0.18
ILF3-201ENST00000250241 TWISTNBQ3B726 338 aaPredicted RBP16.16■□□□□ 0.18
ILF3-201ENST00000250241 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
ILF3-201ENST00000250241 LNPKQ9C0E8 428 aa16.16■□□□□ 0.18
ILF3-201ENST00000250241 TTC21AQ8NDW8 1320 aa16.15■□□□□ 0.18
ILF3-201ENST00000250241 OVOS2A0A0J9YW53 1432 aa16.15■□□□□ 0.18
ILF3-201ENST00000250241 OVOS2Q6IE36 1432 aa16.15■□□□□ 0.18
ILF3-201ENST00000250241 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
ILF3-201ENST00000250241 ANP32BQ92688 251 aaKnown RBP16.15■□□□□ 0.18
ILF3-201ENST00000250241 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
ILF3-201ENST00000250241 PROSER2Q86WR7 435 aaPredicted RBP16.15■□□□□ 0.18
ILF3-201ENST00000250241 CD2BP2O95400 341 aaKnown RBP16.14■□□□□ 0.17
ILF3-201ENST00000250241 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
ILF3-201ENST00000250241 EYA1Q99502 592 aa16.14■□□□□ 0.17
ILF3-201ENST00000250241 SETD1BQ9UPS6 1966 aaKnown RBP16.14■□□□□ 0.17
ILF3-201ENST00000250241 VAMP4O75379 141 aa16.14■□□□□ 0.17
ILF3-201ENST00000250241 R3HCC1Q9Y3T6 440 aaKnown RBP16.14■□□□□ 0.17
ILF3-201ENST00000250241 KIF20AO95235 890 aa16.13■□□□□ 0.17
ILF3-201ENST00000250241 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
ILF3-201ENST00000250241 C1orf115Q9H7X2 142 aa16.13■□□□□ 0.17
ILF3-201ENST00000250241 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
ILF3-201ENST00000250241 IPO8O15397 1037 aaKnown RBP16.13■□□□□ 0.17
ILF3-201ENST00000250241 MSNP26038 577 aaKnown RBP16.13■□□□□ 0.17
ILF3-201ENST00000250241 ZSCAN30Q86W11 494 aa16.13■□□□□ 0.17
ILF3-201ENST00000250241 RTF1Q92541 710 aaKnown RBP16.13■□□□□ 0.17
ILF3-201ENST00000250241 TMEM51Q9NW97 253 aa16.13■□□□□ 0.17
ILF3-201ENST00000250241 SSFA2P28290 1259 aa16.12■□□□□ 0.17
ILF3-201ENST00000250241 MTHFSDQ2M296 383 aaKnown RBP16.12■□□□□ 0.17
ILF3-201ENST00000250241 CFAP44Q96MT7 982 aa16.12■□□□□ 0.17
ILF3-201ENST00000250241 VIRMAQ69YN4 1812 aaKnown RBP16.11■□□□□ 0.17
ILF3-201ENST00000250241 KIF16BQ96L93 1317 aa16.11■□□□□ 0.17
ILF3-201ENST00000250241 ZSCAN20P17040 1043 aaPredicted RBP16.11■□□□□ 0.17
ILF3-201ENST00000250241 HSPA2P54652 639 aa16.11■□□□□ 0.17
ILF3-201ENST00000250241 NASPP49321 788 aaPredicted RBP16.11■□□□□ 0.17
ILF3-201ENST00000250241 NECTIN2Q92692 538 aa16.11■□□□□ 0.17
ILF3-201ENST00000250241 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
ILF3-201ENST00000250241 FLT4P35916 1363 aa16.1■□□□□ 0.17
ILF3-201ENST00000250241 HOXC9P31274 260 aa16.1■□□□□ 0.17
ILF3-201ENST00000250241 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
ILF3-201ENST00000250241 GTPBP4Q9BZE4 634 aaKnown RBP16.1■□□□□ 0.17
ILF3-201ENST00000250241 MPNDQ8N594 471 aa16.09■□□□□ 0.17
ILF3-201ENST00000250241 CHAMP1Q96JM3 812 aa16.09■□□□□ 0.17
ILF3-201ENST00000250241 UQCRHLA0A096LP55 91 aa16.09■□□□□ 0.17
ILF3-201ENST00000250241 DYNC1I1O14576 645 aa16.09■□□□□ 0.17
ILF3-201ENST00000250241 UQCRHP07919 91 aa16.09■□□□□ 0.17
ILF3-201ENST00000250241 CCDC94Q9BW85 323 aaPredicted RBP16.09■□□□□ 0.17
ILF3-201ENST00000250241 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
ILF3-201ENST00000250241 SSH2Q76I76 1423 aa16.09■□□□□ 0.17
ILF3-201ENST00000250241 TOPAZ1Q8N9V7 1692 aa16.09■□□□□ 0.17
ILF3-201ENST00000250241 DDX17Q92841 729 aaKnown RBP16.08■□□□□ 0.17
ILF3-201ENST00000250241 USP31Q70CQ4 1352 aa16.08■□□□□ 0.17
ILF3-201ENST00000250241 NPHP4O75161 1426 aaPredicted RBP16.08■□□□□ 0.16
ILF3-201ENST00000250241 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.16
ILF3-201ENST00000250241 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
ILF3-201ENST00000250241 MRPL50Q8N5N7 158 aaKnown RBP16.08■□□□□ 0.16
ILF3-201ENST00000250241 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
ILF3-201ENST00000250241 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
ILF3-201ENST00000250241 CCDC173Q0VFZ6 552 aa16.08■□□□□ 0.16
ILF3-201ENST00000250241 GBP4Q96PP9 640 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms