RNA–Protein interactions for RNA: ENST00000249269.8

PMPCB-201, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMPCB, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-201ENST00000249269 ERCC6L2Q5T890 1561 aa18.41■□□□□ 0.54
PMPCB-201ENST00000249269 KIF3BO15066 747 aa18.41■□□□□ 0.54
PMPCB-201ENST00000249269 NRDCO43847 1150 aa18.41■□□□□ 0.54
PMPCB-201ENST00000249269 ATF7IPQ6VMQ6 1270 aa18.41■□□□□ 0.54
PMPCB-201ENST00000249269 ANKRD13AQ8IZ07 590 aa18.41■□□□□ 0.54
PMPCB-201ENST00000249269 AFAP1Q8N556 730 aa18.41■□□□□ 0.54
PMPCB-201ENST00000249269 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
PMPCB-201ENST00000249269 SLC20A2Q08357 652 aa18.41■□□□□ 0.54
PMPCB-201ENST00000249269 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 GOLGA6CA6NDK9 693 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 GOLGA6BA6NDN3 693 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 GOLGA6DP0CG33 693 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 SCP2P22307 547 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 GOLGA6AQ9NYA3 693 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 CDC42BPGQ6DT37 1551 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 CFAP74Q9C0B2 1584 aa18.4■□□□□ 0.54
PMPCB-201ENST00000249269 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
PMPCB-201ENST00000249269 BANK1Q8NDB2 785 aa18.39■□□□□ 0.53
PMPCB-201ENST00000249269 STK24Q9Y6E0 443 aa18.39■□□□□ 0.53
PMPCB-201ENST00000249269 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
PMPCB-201ENST00000249269 UGGT1Q9NYU2 1555 aa18.38■□□□□ 0.53
PMPCB-201ENST00000249269 NUCB1Q02818 461 aa18.38■□□□□ 0.53
PMPCB-201ENST00000249269 KIDINS220Q9ULH0 1771 aa18.38■□□□□ 0.53
PMPCB-201ENST00000249269 ARHGEF28Q8N1W1 1705 aaKnown RBP18.38■□□□□ 0.53
PMPCB-201ENST00000249269 COL3A1P02461 1466 aaPredicted RBP18.38■□□□□ 0.53
PMPCB-201ENST00000249269 BMP2KLQ5H9B9 411 aa18.38■□□□□ 0.53
PMPCB-201ENST00000249269 STK26Q9P289 416 aa18.38■□□□□ 0.53
PMPCB-201ENST00000249269 PIK3C2BO00750 1634 aa18.37■□□□□ 0.53
PMPCB-201ENST00000249269 GLI2P10070 1586 aa18.37■□□□□ 0.53
PMPCB-201ENST00000249269 ZBTB40Q9NUA8 1239 aa18.37■□□□□ 0.53
PMPCB-201ENST00000249269 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
PMPCB-201ENST00000249269 RNF217Q8TC41 542 aa18.37■□□□□ 0.53
PMPCB-201ENST00000249269 GCC1Q96CN9 775 aa18.37■□□□□ 0.53
PMPCB-201ENST00000249269 SMC4Q9NTJ3 1288 aa18.37■□□□□ 0.53
PMPCB-201ENST00000249269 DMTNQ08495 405 aa18.36■□□□□ 0.53
PMPCB-201ENST00000249269 MTA1Q13330 715 aa18.36■□□□□ 0.53
PMPCB-201ENST00000249269 ATL2Q8NHH9 583 aa18.36■□□□□ 0.53
PMPCB-201ENST00000249269 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
PMPCB-201ENST00000249269 PLEKHF1Q96S99 279 aa18.36■□□□□ 0.53
PMPCB-201ENST00000249269 RAI14Q9P0K7 980 aa18.36■□□□□ 0.53
PMPCB-201ENST00000249269 TRIM27P14373 513 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 KRBA2Q6ZNG9 492 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 CHMP4CQ96CF2 233 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 ASXL2Q76L83 1435 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 SSR1P43307 286 aaKnown RBP18.35■□□□□ 0.53
PMPCB-201ENST00000249269 ANKRD23Q86SG2 305 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 HECW2Q9P2P5 1572 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
PMPCB-201ENST00000249269 RIOK3O14730 519 aaKnown RBP18.34■□□□□ 0.53
PMPCB-201ENST00000249269 RAB3GAP1Q15042 981 aa18.34■□□□□ 0.53
PMPCB-201ENST00000249269 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
PMPCB-201ENST00000249269 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
PMPCB-201ENST00000249269 U2AF1L5P0DN76 240 aaPredicted RBP18.34■□□□□ 0.53
PMPCB-201ENST00000249269 U2AF1Q01081 240 aaKnown RBP eCLIP18.34■□□□□ 0.53
PMPCB-201ENST00000249269 SPATA32Q96LK8 384 aa18.33■□□□□ 0.53
PMPCB-201ENST00000249269 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.52
PMPCB-201ENST00000249269 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
PMPCB-201ENST00000249269 EP400NLQ6ZTU2 488 aa18.33■□□□□ 0.52
PMPCB-201ENST00000249269 GET4Q7L5D6 327 aaPredicted RBP18.33■□□□□ 0.52
PMPCB-201ENST00000249269 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
PMPCB-201ENST00000249269 MLH3Q9UHC1 1453 aa18.33■□□□□ 0.52
PMPCB-201ENST00000249269 KIF24Q5T7B8 1368 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 KIF20AO95235 890 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 PNPLA6Q8IY17 1366 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 TPM2P07951 284 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 RHBDL3P58872 404 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 SATB1Q01826 763 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 FRMPD1Q5SYB0 1578 aa18.32■□□□□ 0.52
PMPCB-201ENST00000249269 ESPNB1AK53 854 aa18.31■□□□□ 0.52
PMPCB-201ENST00000249269 GOLGA6L22H0YM25 854 aa18.31■□□□□ 0.52
PMPCB-201ENST00000249269 TERF1P54274 439 aa18.31■□□□□ 0.52
PMPCB-201ENST00000249269 SETDB1Q15047 1291 aa18.31■□□□□ 0.52
PMPCB-201ENST00000249269 ZNF280DQ6N043 979 aa18.31■□□□□ 0.52
PMPCB-201ENST00000249269 NPATQ14207 1427 aa18.31■□□□□ 0.52
PMPCB-201ENST00000249269 CD109Q6YHK3 1445 aa18.31■□□□□ 0.52
PMPCB-201ENST00000249269 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
PMPCB-201ENST00000249269 ABCC3O15438 1527 aa18.3■□□□□ 0.52
PMPCB-201ENST00000249269 ERCC3P19447 782 aa18.3■□□□□ 0.52
PMPCB-201ENST00000249269 EXOSC9Q06265 439 aaKnown RBP18.3■□□□□ 0.52
PMPCB-201ENST00000249269 CHD1LQ86WJ1 897 aa18.3■□□□□ 0.52
PMPCB-201ENST00000249269 ITPRIPQ8IWB1 547 aa18.3■□□□□ 0.52
PMPCB-201ENST00000249269 MSL3Q8N5Y2 521 aaKnown RBP18.3■□□□□ 0.52
PMPCB-201ENST00000249269 BORCS6Q96GS4 357 aa18.3■□□□□ 0.52
PMPCB-201ENST00000249269 CAMSAP1Q5T5Y3 1602 aa18.3■□□□□ 0.52
PMPCB-201ENST00000249269 PPFIA4O75335 1185 aa18.29■□□□□ 0.52
PMPCB-201ENST00000249269 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
PMPCB-201ENST00000249269 PEX14O75381 377 aa18.29■□□□□ 0.52
PMPCB-201ENST00000249269 CCDC173Q0VFZ6 552 aa18.29■□□□□ 0.52
PMPCB-201ENST00000249269 ZKSCAN8Q15776 578 aaPredicted RBP18.29■□□□□ 0.52
PMPCB-201ENST00000249269 HS1BP3Q53T59 392 aa18.29■□□□□ 0.52
PMPCB-201ENST00000249269 TNNQ9UQP3 1299 aa18.29■□□□□ 0.52
PMPCB-201ENST00000249269 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
PMPCB-201ENST00000249269 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
PMPCB-201ENST00000249269 PPP1R9BQ96SB3 815 aa18.28■□□□□ 0.52
PMPCB-201ENST00000249269 PTCH1Q13635 1447 aa18.28■□□□□ 0.52
PMPCB-201ENST00000249269 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms