RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 ATP10DQ9P241 1426 aa30.12■■■□□ 2.41
SNTA1-201ENST00000217381 MCM10Q7L590 875 aa30.12■■■□□ 2.41
SNTA1-201ENST00000217381 RGPD8O14715 1765 aaPredicted RBP30.11■■■□□ 2.41
SNTA1-201ENST00000217381 DIP2AQ14689 1571 aa30.1■■■□□ 2.41
SNTA1-201ENST00000217381 GSPT1P15170 499 aaKnown RBP30.1■■■□□ 2.41
SNTA1-201ENST00000217381 AMOTL2Q9Y2J4 779 aa30.1■■■□□ 2.41
SNTA1-201ENST00000217381 RIMS1Q86UR5 1692 aaKnown RBP30.1■■■□□ 2.41
SNTA1-201ENST00000217381 CDC45O75419 566 aa30.1■■■□□ 2.41
SNTA1-201ENST00000217381 PLEKHM2Q8IWE5 1019 aa30.1■■■□□ 2.41
SNTA1-201ENST00000217381 CRB1P82279 1406 aa30.09■■■□□ 2.41
SNTA1-201ENST00000217381 ARHGEF10O15013 1369 aa30.08■■■□□ 2.41
SNTA1-201ENST00000217381 TRAK2O60296 914 aa30.08■■■□□ 2.41
SNTA1-201ENST00000217381 ANKRD44Q8N8A2 993 aa30.08■■■□□ 2.41
SNTA1-201ENST00000217381 EID1Q9Y6B2 187 aa30.08■■■□□ 2.41
SNTA1-201ENST00000217381 MAP3K19Q56UN5 1328 aa30.08■■■□□ 2.41
SNTA1-201ENST00000217381 HSP90AB1P08238 724 aaKnown RBP30.07■■■□□ 2.4
SNTA1-201ENST00000217381 TTC21AQ8NDW8 1320 aa30.07■■■□□ 2.4
SNTA1-201ENST00000217381 CIZ1Q9ULV3 898 aaPredicted RBP30.07■■■□□ 2.4
SNTA1-201ENST00000217381 PIK3C2AO00443 1686 aa30.06■■■□□ 2.4
SNTA1-201ENST00000217381 FSD2A1L4K1 749 aa30.06■■■□□ 2.4
SNTA1-201ENST00000217381 TBX22Q9Y458 520 aa30.06■■■□□ 2.4
SNTA1-201ENST00000217381 DDX11L8A8MPP1 907 aa30.06■■■□□ 2.4
SNTA1-201ENST00000217381 CD2BP2O95400 341 aaKnown RBP30.06■■■□□ 2.4
SNTA1-201ENST00000217381 MSH6P52701 1360 aa30.05■■■□□ 2.4
SNTA1-201ENST00000217381 PTPRCP08575 1304 aa30.05■■■□□ 2.4
SNTA1-201ENST00000217381 SOX12O15370 315 aa30.05■■■□□ 2.4
SNTA1-201ENST00000217381 RPAP2Q8IXW5 612 aaPredicted RBP30.04■■■□□ 2.4
SNTA1-201ENST00000217381 XRN1Q8IZH2 1706 aaKnown RBP30.04■■■□□ 2.4
SNTA1-201ENST00000217381 TTC22Q5TAA0 569 aa30.03■■■□□ 2.4
SNTA1-201ENST00000217381 CEP85Q6P2H3 762 aa30.03■■■□□ 2.4
SNTA1-201ENST00000217381 SBNO1A3KN83 1393 aa30.03■■■□□ 2.4
SNTA1-201ENST00000217381 RTL1A6NKG5 1358 aa30.03■■■□□ 2.4
SNTA1-201ENST00000217381 FAM43AQ8N2R8 423 aa30.02■■■□□ 2.4
SNTA1-201ENST00000217381 GZF1Q9H116 711 aaPredicted RBP30.02■■■□□ 2.4
SNTA1-201ENST00000217381 KDRP35968 1356 aa30.02■■■□□ 2.4
SNTA1-201ENST00000217381 GOLGA6L3A6NEY3 463 aa30.02■■■□□ 2.4
SNTA1-201ENST00000217381 FLT4P35916 1363 aa30.02■■■□□ 2.4
SNTA1-201ENST00000217381 K7ELQ4 463 aaPredicted RBP30.01■■■□□ 2.4
SNTA1-201ENST00000217381 TNPO1Q92973 898 aaKnown RBP30.01■■■□□ 2.4
SNTA1-201ENST00000217381 FER1L4A9Z1Z3 1794 aa30.01■■■□□ 2.39
SNTA1-201ENST00000217381 CEP170BQ9Y4F5 1589 aaPredicted RBP30.01■■■□□ 2.39
SNTA1-201ENST00000217381 RBM42Q9BTD8 480 aaKnown RBP30■■■□□ 2.39
SNTA1-201ENST00000217381 FOXO3O43524 673 aa30■■■□□ 2.39
SNTA1-201ENST00000217381 RAB3GAP1Q15042 981 aa30■■■□□ 2.39
SNTA1-201ENST00000217381 C16orf71Q8IYS4 520 aaPredicted RBP30■■■□□ 2.39
SNTA1-201ENST00000217381 MARF1Q9Y4F3 1742 aaKnown RBP29.99■■■□□ 2.39
SNTA1-201ENST00000217381 MTHFSDQ2M296 383 aaKnown RBP29.99■■■□□ 2.39
SNTA1-201ENST00000217381 XRCC6P12956 609 aaKnown RBP eCLIP29.98■■■□□ 2.39
SNTA1-201ENST00000217381 EIF5BO60841 1220 aaKnown RBP29.97■■■□□ 2.39
SNTA1-201ENST00000217381 MEIS3Q99687 375 aa29.97■■■□□ 2.39
SNTA1-201ENST00000217381 IGSF1Q8N6C5 1336 aa29.96■■■□□ 2.39
SNTA1-201ENST00000217381 SLC4A2P04920 1241 aa29.95■■■□□ 2.39
SNTA1-201ENST00000217381 OTUD7AQ8TE49 926 aaPredicted RBP29.95■■■□□ 2.39
SNTA1-201ENST00000217381 NGDNQ8NEJ9 315 aaKnown RBP29.95■■■□□ 2.38
SNTA1-201ENST00000217381 MIS18AQ9NYP9 233 aa29.95■■■□□ 2.38
SNTA1-201ENST00000217381 LRRC37A3O60309 1634 aa29.94■■■□□ 2.38
SNTA1-201ENST00000217381 HSP90AA1P07900 732 aaKnown RBP29.94■■■□□ 2.38
SNTA1-201ENST00000217381 EYA1Q99502 592 aa29.94■■■□□ 2.38
SNTA1-201ENST00000217381 GBP4Q96PP9 640 aa29.93■■■□□ 2.38
SNTA1-201ENST00000217381 ARXQ96QS3 562 aa29.93■■■□□ 2.38
SNTA1-201ENST00000217381 USP54Q70EL1 1684 aa29.92■■■□□ 2.38
SNTA1-201ENST00000217381 FOXD4L1Q9NU39 408 aa29.91■■■□□ 2.38
SNTA1-201ENST00000217381 ANKARQ7Z5J8 1434 aa29.91■■■□□ 2.38
SNTA1-201ENST00000217381 GAS2L2Q8NHY3 880 aa29.91■■■□□ 2.38
SNTA1-201ENST00000217381 TSPYL4Q9UJ04 414 aa29.91■■■□□ 2.38
SNTA1-201ENST00000217381 SMARCA5O60264 1052 aaPredicted RBP29.9■■■□□ 2.38
SNTA1-201ENST00000217381 RTF1Q92541 710 aaKnown RBP29.9■■■□□ 2.38
SNTA1-201ENST00000217381 NWD1Q149M9 1564 aa29.9■■■□□ 2.38
SNTA1-201ENST00000217381 THEMISQ8N1K5 641 aaPredicted RBP29.9■■■□□ 2.38
SNTA1-201ENST00000217381 USP26Q9BXU7 913 aa29.9■■■□□ 2.38
SNTA1-201ENST00000217381 ANO8Q9HCE9 1232 aaPredicted RBP29.9■■■□□ 2.38
SNTA1-201ENST00000217381 RABEP1Q15276 862 aa29.89■■■□□ 2.38
SNTA1-201ENST00000217381 SDSP20132 328 aa29.89■■■□□ 2.37
SNTA1-201ENST00000217381 AMPHP49418 695 aa29.89■■■□□ 2.37
SNTA1-201ENST00000217381 G2E3Q7L622 706 aa29.89■■■□□ 2.37
SNTA1-201ENST00000217381 PANK2Q9BZ23 570 aa29.87■■■□□ 2.37
SNTA1-201ENST00000217381 APBB1O00213 710 aa29.86■■■□□ 2.37
SNTA1-201ENST00000217381 MRE11P49959 708 aa29.85■■■□□ 2.37
SNTA1-201ENST00000217381 HMMRO75330 724 aa29.85■■■□□ 2.37
SNTA1-201ENST00000217381 KCNA6P17658 529 aa29.85■■■□□ 2.37
SNTA1-201ENST00000217381 CCT4P50991 539 aaKnown RBP29.85■■■□□ 2.37
SNTA1-201ENST00000217381 F6X3S4 739 aa29.84■■■□□ 2.37
SNTA1-201ENST00000217381 FAM208AQ9UK61 1670 aaKnown RBP29.84■■■□□ 2.37
SNTA1-201ENST00000217381 PTMSP20962 102 aa29.84■■■□□ 2.37
SNTA1-201ENST00000217381 NLRP6P59044 892 aa29.84■■■□□ 2.37
SNTA1-201ENST00000217381 SLC4A10Q6U841 1118 aa29.83■■■□□ 2.37
SNTA1-201ENST00000217381 ISY1Q9ULR0 285 aaKnown RBP29.83■■■□□ 2.37
SNTA1-201ENST00000217381 HOXC9P31274 260 aa29.82■■■□□ 2.36
SNTA1-201ENST00000217381 CASC1Q6TDU7 716 aa29.82■■■□□ 2.36
SNTA1-201ENST00000217381 SSFA2P28290 1259 aa29.82■■■□□ 2.36
SNTA1-201ENST00000217381 SKOR2Q2VWA4 1001 aaPredicted RBP29.82■■■□□ 2.36
SNTA1-201ENST00000217381 CLEC17AQ6ZS10 378 aa29.81■■■□□ 2.36
SNTA1-201ENST00000217381 OSBPL3Q9H4L5 887 aa29.8■■■□□ 2.36
SNTA1-201ENST00000217381 GRPEL1Q9HAV7 217 aa29.8■■■□□ 2.36
SNTA1-201ENST00000217381 RRAGDQ9NQL2 400 aaPredicted RBP29.8■■■□□ 2.36
SNTA1-201ENST00000217381 HTATSF1O43719 755 aaKnown RBP29.79■■■□□ 2.36
SNTA1-201ENST00000217381 NUTM2GQ5VZR2 741 aa29.79■■■□□ 2.36
SNTA1-201ENST00000217381 STK31Q9BXU1 1019 aa29.77■■■□□ 2.36
SNTA1-201ENST00000217381 GNAI2P04899 355 aa29.76■■■□□ 2.35
SNTA1-201ENST00000217381 PDE1AP54750 535 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms