RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 RGPD1P0DJD0 1748 aa16.49■□□□□ 0.23
SRP54-201ENST00000216774 NALCNQ8IZF0 1738 aa16.49■□□□□ 0.23
SRP54-201ENST00000216774 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
SRP54-201ENST00000216774 MLECQ14165 292 aa16.48■□□□□ 0.23
SRP54-201ENST00000216774 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
SRP54-201ENST00000216774 RRAGDQ9NQL2 400 aaPredicted RBP16.48■□□□□ 0.23
SRP54-201ENST00000216774 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
SRP54-201ENST00000216774 PANK2Q9BZ23 570 aa16.48■□□□□ 0.23
SRP54-201ENST00000216774 ROBO2Q9HCK4 1378 aa16.47■□□□□ 0.23
SRP54-201ENST00000216774 CEP85Q6P2H3 762 aa16.47■□□□□ 0.23
SRP54-201ENST00000216774 ARXQ96QS3 562 aa16.47■□□□□ 0.23
SRP54-201ENST00000216774 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
SRP54-201ENST00000216774 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
SRP54-201ENST00000216774 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
SRP54-201ENST00000216774 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
SRP54-201ENST00000216774 ESF1Q9H501 851 aaKnown RBP16.47■□□□□ 0.23
SRP54-201ENST00000216774 USP31Q70CQ4 1352 aa16.46■□□□□ 0.23
SRP54-201ENST00000216774 MSH6P52701 1360 aa16.46■□□□□ 0.23
SRP54-201ENST00000216774 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
SRP54-201ENST00000216774 TNRQ92752 1358 aa16.45■□□□□ 0.22
SRP54-201ENST00000216774 USP6P35125 1406 aa16.45■□□□□ 0.22
SRP54-201ENST00000216774 CRB1P82279 1406 aa16.45■□□□□ 0.22
SRP54-201ENST00000216774 CASC1Q6TDU7 716 aa16.45■□□□□ 0.22
SRP54-201ENST00000216774 PEAK1Q9H792 1746 aa16.45■□□□□ 0.22
SRP54-201ENST00000216774 GOLGA6L22H0YM25 854 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 MCM10Q7L590 875 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 USP26Q9BXU7 913 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 ACEP12821 1306 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 UBR1Q8IWV7 1749 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 KRT24Q2M2I5 525 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
SRP54-201ENST00000216774 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.44■□□□□ 0.22
SRP54-201ENST00000216774 C16orf71Q8IYS4 520 aaPredicted RBP16.43■□□□□ 0.22
SRP54-201ENST00000216774 HMMRO75330 724 aa16.42■□□□□ 0.22
SRP54-201ENST00000216774 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
SRP54-201ENST00000216774 SDSP20132 328 aa16.42■□□□□ 0.22
SRP54-201ENST00000216774 HSP90AB2PQ58FF8 381 aa16.42■□□□□ 0.22
SRP54-201ENST00000216774 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
SRP54-201ENST00000216774 IBTKQ9P2D0 1353 aaPredicted RBP16.41■□□□□ 0.22
SRP54-201ENST00000216774 SSFA2P28290 1259 aa16.41■□□□□ 0.22
SRP54-201ENST00000216774 CLCN1P35523 988 aa16.41■□□□□ 0.22
SRP54-201ENST00000216774 MEIS3Q99687 375 aa16.41■□□□□ 0.22
SRP54-201ENST00000216774 PLEKHG1Q9ULL1 1385 aa16.41■□□□□ 0.22
SRP54-201ENST00000216774 NUCB2P80303 420 aa16.4■□□□□ 0.22
SRP54-201ENST00000216774 REC8O95072 547 aa16.4■□□□□ 0.22
SRP54-201ENST00000216774 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
SRP54-201ENST00000216774 CCT4P50991 539 aaKnown RBP16.4■□□□□ 0.22
SRP54-201ENST00000216774 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
SRP54-201ENST00000216774 TTC21AQ8NDW8 1320 aa16.39■□□□□ 0.22
SRP54-201ENST00000216774 BAG4O95429 457 aaKnown RBP16.39■□□□□ 0.21
SRP54-201ENST00000216774 KLHL40Q2TBA0 621 aa16.39■□□□□ 0.21
SRP54-201ENST00000216774 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
SRP54-201ENST00000216774 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
SRP54-201ENST00000216774 FMN2Q9NZ56 1722 aa16.39■□□□□ 0.21
SRP54-201ENST00000216774 KDRP35968 1356 aa16.39■□□□□ 0.21
SRP54-201ENST00000216774 ST18O60284 1047 aa16.38■□□□□ 0.21
SRP54-201ENST00000216774 GAS2L3Q86XJ1 694 aa16.38■□□□□ 0.21
SRP54-201ENST00000216774 RTF1Q92541 710 aaKnown RBP16.38■□□□□ 0.21
SRP54-201ENST00000216774 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
SRP54-201ENST00000216774 FLT4P35916 1363 aa16.38■□□□□ 0.21
SRP54-201ENST00000216774 MAP3K19Q56UN5 1328 aa16.37■□□□□ 0.21
SRP54-201ENST00000216774 SMARCA5O60264 1052 aaPredicted RBP16.37■□□□□ 0.21
SRP54-201ENST00000216774 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
SRP54-201ENST00000216774 TSPYL4Q9UJ04 414 aa16.36■□□□□ 0.21
SRP54-201ENST00000216774 ERC2O15083 957 aa16.36■□□□□ 0.21
SRP54-201ENST00000216774 MTHFSDQ2M296 383 aaKnown RBP16.35■□□□□ 0.21
SRP54-201ENST00000216774 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
SRP54-201ENST00000216774 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
SRP54-201ENST00000216774 APBB1O00213 710 aa16.34■□□□□ 0.21
SRP54-201ENST00000216774 GNAI2P04899 355 aa16.34■□□□□ 0.21
SRP54-201ENST00000216774 PDE1AP54750 535 aa16.34■□□□□ 0.21
SRP54-201ENST00000216774 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
SRP54-201ENST00000216774 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
SRP54-201ENST00000216774 PTPRUQ92729 1446 aa16.33■□□□□ 0.21
SRP54-201ENST00000216774 ESPNB1AK53 854 aa16.33■□□□□ 0.2
SRP54-201ENST00000216774 MIS18AQ9NYP9 233 aa16.33■□□□□ 0.2
SRP54-201ENST00000216774 SOS1Q07889 1333 aaPredicted RBP16.33■□□□□ 0.2
SRP54-201ENST00000216774 FOXO3O43524 673 aa16.33■□□□□ 0.2
SRP54-201ENST00000216774 SLC4A10Q6U841 1118 aa16.33■□□□□ 0.2
SRP54-201ENST00000216774 G2E3Q7L622 706 aa16.33■□□□□ 0.2
SRP54-201ENST00000216774 TRIM44Q96DX7 344 aaPredicted RBP16.33■□□□□ 0.2
SRP54-201ENST00000216774 STK31Q9BXU1 1019 aa16.33■□□□□ 0.2
SRP54-201ENST00000216774 LTKP29376 864 aa16.32■□□□□ 0.2
SRP54-201ENST00000216774 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
SRP54-201ENST00000216774 GNAI3P08754 354 aa16.31■□□□□ 0.2
SRP54-201ENST00000216774 RIMS1Q86UR5 1692 aaKnown RBP16.31■□□□□ 0.2
SRP54-201ENST00000216774 F6X3S4 739 aa16.31■□□□□ 0.2
SRP54-201ENST00000216774 ZNF445P59923 1031 aa16.31■□□□□ 0.2
SRP54-201ENST00000216774 CCDC173Q0VFZ6 552 aa16.31■□□□□ 0.2
SRP54-201ENST00000216774 SALL3Q9BXA9 1300 aa16.31■□□□□ 0.2
SRP54-201ENST00000216774 CEP170BQ9Y4F5 1589 aaPredicted RBP16.31■□□□□ 0.2
SRP54-201ENST00000216774 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
SRP54-201ENST00000216774 MCTP1Q6DN14 999 aa16.3■□□□□ 0.2
SRP54-201ENST00000216774 SOX12O15370 315 aa16.3■□□□□ 0.2
SRP54-201ENST00000216774 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
SRP54-201ENST00000216774 PPP1R9BQ96SB3 815 aa16.3■□□□□ 0.2
SRP54-201ENST00000216774 EYA1Q99502 592 aa16.3■□□□□ 0.2
SRP54-201ENST00000216774 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
SRP54-201ENST00000216774 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms