RNA–Protein interactions for RNA: ENSMUST00000200043.4

Pdlim5-212, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-212ENSMUST00000200043 Tjp1P39447 1745 aaKnown RBP20.6■□□□□ 0.89
Pdlim5-212ENSMUST00000200043 Ccdc6D3YZP9 469 aa20.59■□□□□ 0.89
Pdlim5-212ENSMUST00000200043 Apaf1O88879 1249 aa20.59■□□□□ 0.89
Pdlim5-212ENSMUST00000200043 Q4VA45 678 aa20.59■□□□□ 0.89
Pdlim5-212ENSMUST00000200043 Aox2Q5SGK3 1345 aa20.59■□□□□ 0.89
Pdlim5-212ENSMUST00000200043 Ppfibp2O35711 882 aa20.59■□□□□ 0.89
Pdlim5-212ENSMUST00000200043 Ubr2Q6WKZ8 1755 aa20.58■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Esx1O88933 382 aa20.58■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Zcrb1Q9CZ96 217 aaKnown RBP20.58■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Mapk8ip3Q9ESN9 1337 aa20.57■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 TmpoQ61033 693 aaKnown RBP20.57■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Pdzd9Q9D9M4 266 aa20.57■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Phkg2Q9DB30 406 aa20.57■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Myo5bP21271 1818 aa20.57■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Slc4a2P13808 1237 aaKnown RBP20.56■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Rab11fip3Q8CHD8 1047 aa20.56■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Eif3bQ8JZQ9 803 aaKnown RBP20.56■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Gm21663A0A0G2JE01 267 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Gm7361D3Z6R1 267 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 5031410I06RikE9Q4E0 267 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Gm1979E9QAN3 267 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Gm5862K7N5V5 267 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Gm10220K7N660 267 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Snap23O09044 210 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Golga2Q921M4 999 aa20.55■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Znf541Q0GGX2 1363 aa20.54■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 GalcP54818 684 aa20.54■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Asic4Q7TNS7 539 aa20.54■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Usp19Q3UJD6 1360 aa20.53■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Slc5a1Q8C3K6 665 aa20.53■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Iqcf3Q9D498 203 aa20.53■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Map4k4P97820 1233 aaKnown RBP20.52■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 ApobrQ8VBT6 942 aa20.52■□□□□ 0.88
Pdlim5-212ENSMUST00000200043 Chmp7Q8R1T1 451 aa20.51■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Nkx2-3P97334 362 aa20.51■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Ccnl1Q52KE7 532 aaKnown RBP20.51■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 NrdcQ8BHG1 1161 aa20.51■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Arhgap33Q80YF9 1305 aa20.5■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Nsd3Q6P2L6 1439 aa20.5■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Crb1Q8VHS2 1405 aa20.5■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Ssfa2Q922B9 1252 aa20.5■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Erbb3Q61526 1339 aa20.49■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Afg3l2Q8JZQ2 802 aaKnown RBP20.48■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Ints5Q8CHT3 1018 aa20.46■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Cavin4A2AMM0 362 aa20.46■□□□□ 0.87
Pdlim5-212ENSMUST00000200043 Vars2Q3U2A8 1060 aa20.45■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Ccdc155Q80VJ8 648 aa20.45■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Abcc12Q80WJ6 1366 aa20.45■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Uhrf1bp1B2KF50 1429 aa20.45■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Uspl1Q3ULM6 1089 aa20.44■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Tiam2Q6ZPF3 1715 aa20.43■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Sos2Q02384 1333 aa20.43■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Snapc4Q8BP86 1333 aa20.43■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Rtf1A2AQ19 715 aaKnown RBP20.43■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Stra8P70278 393 aa20.43■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Rps6ka4Q9Z2B9 773 aa20.43■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Sos1Q62245 1319 aa20.42■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Dusp27Q148W8 1138 aa20.42■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Klc3Q91W40 508 aa20.41■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 CrbnQ8C7D2 445 aa20.4■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Swt1Q9DBQ9 907 aa20.4■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Hdac6Q9Z2V5 1149 aa20.4■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 VirmaA2AIV2 1811 aaKnown RBP20.39■□□□□ 0.86
Pdlim5-212ENSMUST00000200043 Q8BT18 775 aa20.39■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Apba2P98084 750 aa20.38■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Mak16Q8BGS0 296 aaKnown RBP20.38■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Prim1P20664 417 aa20.37■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Kiaa0319lQ8K135 1048 aa20.37■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Ggnbp2Q5SV77 696 aa20.36■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Pim2Q62070 370 aa20.36■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Ciz1Q8VEH2 845 aa20.36■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Dlg5E9Q9R9 1921 aa20.36■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Atg3Q9CPX6 314 aa20.35■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Kndc1Q0KK55 1742 aa20.35■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 AceP09470 1312 aa20.34■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Cap2Q9CYT6 476 aa20.34■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 Nav1Q8CH77 1875 aa20.33■□□□□ 0.85
Pdlim5-212ENSMUST00000200043 OscarQ8VBT3 265 aa20.33■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Atxn3Q9CVD2 355 aa20.33■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Senp3Q9EP97 568 aaKnown RBP20.33■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Btbd11Q6GQW0 1109 aa20.32■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Efcab2Q9CQ46 164 aa20.32■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Ildr2B5TVM2 661 aa20.31■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Rad21Q61550 635 aaKnown RBP20.31■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Neurod2Q62414 383 aa20.31■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Ankrd13dQ6PD24 605 aa20.31■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Speer4f1Q9D5Q6 258 aa20.31■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Klhdc4Q921I2 584 aa20.3■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Bicdl1A0JNT9 577 aa20.29■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 C4bP01029 1738 aa20.29■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Dcaf5Q80T85 946 aa20.29■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Jmjd4Q8BFT6 427 aa20.29■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Irx6Q9ER75 438 aa20.29■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Smg7Q5RJH6 1138 aaKnown RBP20.28■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Ezh2Q61188 746 aaKnown RBP20.27■□□□□ 0.84
Pdlim5-212ENSMUST00000200043 Pibf1E9Q6K3 756 aa20.25■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Ncbp3Q8BZR9 615 aaKnown RBP20.25■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 PigbQ9JJQ0 542 aa20.25■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 U2surpQ6NV83 1029 aaKnown RBP20.24■□□□□ 0.83
Pdlim5-212ENSMUST00000200043 Cdc37l1Q9CZP7 335 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms