RNA–Protein interactions for RNA: ENSMUST00000115578.9

Ufd1-202, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ufd1, Length 2,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-202ENSMUST00000115578 Kcnh8P59111 1102 aa14.34□□□□□ -0.11
Ufd1-202ENSMUST00000115578 Simc1E9Q6E9 1354 aa14.33□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Larp1bA0A0A6YXJ7 370 aaKnown RBP14.33□□□□□ -0.12
Ufd1-202ENSMUST00000115578 CanxP35564 591 aaKnown RBP14.33□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Rwdd1Q9CQK7 243 aa14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Cdc37l1Q9CZP7 335 aa14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 ChgaP26339 463 aaKnown RBP14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 CrklP47941 303 aa14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Gimap5Q8BWF2 308 aa14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Ccar1Q8CH18 1146 aaKnown RBP14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 OptnQ8K3K8 584 aa14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 HypkQ9CR41 129 aa14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Txnrd1Q9JMH6 613 aa14.32□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Smim5Q8BT42 78 aa14.31□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Dnttip2Q8R2M2 758 aaKnown RBP14.31□□□□□ -0.12
Ufd1-202ENSMUST00000115578 AU015836B2RUM3 263 aa14.3□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Klhdc4Q921I2 584 aa14.3□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Cdhr2E9Q7P9 1308 aa14.3□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Gnai1B2RSH2 354 aa14.3□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Znf526Q8BI66 675 aa14.3□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Gnai3Q9DC51 354 aa14.3□□□□□ -0.12
Ufd1-202ENSMUST00000115578 NudcO35685 332 aaKnown RBP14.29□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Apbb1Q9QXJ1 710 aa14.29□□□□□ -0.12
Ufd1-202ENSMUST00000115578 DmtnQ9WV69 405 aa14.29□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Kdm2bQ6P1G2 1309 aa14.29□□□□□ -0.12
Ufd1-202ENSMUST00000115578 RgmbQ7TQ33 436 aa14.29□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Acsbg1Q99PU5 721 aa14.29□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Amotl1Q9D4H4 968 aa14.29□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Gsdma3Q5Y4Y6 464 aa14.28□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Rab11fip3Q8CHD8 1047 aa14.28□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Prim1P20664 417 aa14.27□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Htatsf1Q8BGC0 757 aa14.27□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Slx1bQ8BX32 270 aa14.27□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Ybx3Q9JKB3 361 aaKnown RBP14.27□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Aox2Q5SGK3 1345 aa14.27□□□□□ -0.12
Ufd1-202ENSMUST00000115578 Vamp4O70480 141 aa14.27□□□□□ -0.13
Ufd1-202ENSMUST00000115578 TkfcQ8VC30 578 aa14.27□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Tns2Q8CGB6 1400 aa14.27□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Rrp9Q91WM3 475 aaKnown RBP14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Trim26Q99PN3 545 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Bcl11bQ99PV8 884 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Bcl2l12Q9D3J3 255 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Sos1Q62245 1319 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Dlg5E9Q9R9 1921 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Znf521Q6KAS7 1311 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Pard3Q99NH2 1333 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Hspa1lP16627 641 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Nkx2-3P97334 362 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Ggnbp2Q5SV77 696 aa14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Senp3Q9EP97 568 aaKnown RBP14.26□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Gm10471E9Q1C7 252 aa14.25□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Sart3Q9JLI8 962 aaKnown RBP14.25□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Akap11E9Q777 1895 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Ccdc171E9Q1U1 1324 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Kif20aP97329 887 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Ccdc60Q8C4J0 545 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 ZgpatQ8VDM1 511 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Usp16Q99LG0 825 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Ubr2Q6WKZ8 1755 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Polr3glQ8R0C0 218 aa14.24□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Nsd3Q6P2L6 1439 aa14.23□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Msh6P54276 1358 aaKnown RBP14.23□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Pank1Q8K4K6 548 aa14.23□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Abcc12Q80WJ6 1366 aa14.23□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Rtf1A2AQ19 715 aaKnown RBP14.22□□□□□ -0.13
Ufd1-202ENSMUST00000115578 U2surpQ6NV83 1029 aaKnown RBP14.22□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Ppp1r3fQ9JIG4 799 aa14.22□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Trim58Q5NCC9 485 aa14.21□□□□□ -0.13
Ufd1-202ENSMUST00000115578 ThemisQ8BGW0 636 aa14.21□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Phf14Q9D4H9 881 aa14.21□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Igsf1Q7TQA1 1317 aa14.21□□□□□ -0.13
Ufd1-202ENSMUST00000115578 Zranb3Q6NZP1 1069 aa14.21□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Smc5Q8CG46 1101 aaKnown RBP14.21□□□□□ -0.14
Ufd1-202ENSMUST00000115578 KarsQ99MN1 595 aaKnown RBP14.21□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Tom1O88746 492 aa14.2□□□□□ -0.14
Ufd1-202ENSMUST00000115578 HdgfP51859 237 aaKnown RBP14.2□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Tspyl2Q7TQI8 677 aa14.2□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Plekhm2Q80TQ5 1018 aa14.2□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Chmp5Q9D7S9 219 aa14.2□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Foxp4Q9DBY0 795 aaKnown RBP14.2□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Qtrt2B8ZXI1 415 aa14.19□□□□□ -0.14
Ufd1-202ENSMUST00000115578 G3bp1P97855 465 aaKnown RBP14.19□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Ipo8Q7TMY7 1010 aa14.19□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Cyp2d12Q8BVD2 504 aa14.18□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Rtn4Q99P72 1162 aaKnown RBP14.18□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Kat6bQ8BRB7 1872 aa14.18□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Gm6268A2A3U9 297 aa14.18□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Arhgef1Q61210 920 aaKnown RBP14.18□□□□□ -0.14
Ufd1-202ENSMUST00000115578 MarsQ68FL6 902 aaKnown RBP14.18□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Pdzd9Q9D9M4 266 aa14.18□□□□□ -0.14
Ufd1-202ENSMUST00000115578 BcorQ8CGN4 1759 aa14.17□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Cavin2Q63918 418 aaKnown RBP14.17□□□□□ -0.14
Ufd1-202ENSMUST00000115578 PappaQ8R4K8 1624 aa14.17□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Fer1l6E0CZ42 1862 aa14.17□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Pibf1E9Q6K3 756 aa14.16□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Lrrc59Q922Q8 307 aaKnown RBP14.16□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Nectin2P32507 530 aa14.16□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Chl1P70232 1209 aa14.16□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Ppp1r9bQ6R891 817 aaKnown RBP14.16□□□□□ -0.14
Ufd1-202ENSMUST00000115578 Rbm10Q99KG3 930 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms