RNA–Protein interactions for RNA: ENSMUST00000115578.9

Ufd1-202, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ufd1, Length 2,078 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-202ENSMUST00000115578 Gm35339A0A140LHH9 1649 aa23.63■■□□□ 1.37
Ufd1-202ENSMUST00000115578 NischQ80TM9 1593 aa23.51■■□□□ 1.35
Ufd1-202ENSMUST00000115578 Abcc9P70170 1546 aa22.87■■□□□ 1.25
Ufd1-202ENSMUST00000115578 Abcc8B2RUS7 1588 aa22.57■■□□□ 1.2
Ufd1-202ENSMUST00000115578 ScribQ80U72 1612 aa21.46■■□□□ 1.03
Ufd1-202ENSMUST00000115578 Dcaf1Q80TR8 1506 aa20.94■□□□□ 0.94
Ufd1-202ENSMUST00000115578 Kdm5dQ62240 1548 aa20.84■□□□□ 0.93
Ufd1-202ENSMUST00000115578 Rhox8Q6VSS7 320 aa20.78■□□□□ 0.92
Ufd1-202ENSMUST00000115578 NacadQ5SWP3 1504 aa20.72■□□□□ 0.91
Ufd1-202ENSMUST00000115578 Rb1cc1Q9ESK9 1588 aa20.56■□□□□ 0.88
Ufd1-202ENSMUST00000115578 Ccdc180J3QNE4 1664 aa20.43■□□□□ 0.86
Ufd1-202ENSMUST00000115578 Sycp2Q9CUU3 1500 aa20.32■□□□□ 0.84
Ufd1-202ENSMUST00000115578 Baz1aO88379 1555 aa20.31■□□□□ 0.84
Ufd1-202ENSMUST00000115578 Rtl1Q7M732 1744 aa20.15■□□□□ 0.82
Ufd1-202ENSMUST00000115578 Crybg2B7ZCC2 1516 aa20.09■□□□□ 0.81
Ufd1-202ENSMUST00000115578 BicraF8VPZ9 1578 aa20.02■□□□□ 0.79
Ufd1-202ENSMUST00000115578 Smarca2Q6DIC0 1577 aa19.83■□□□□ 0.77
Ufd1-202ENSMUST00000115578 Zcchc6Q5BLK4 1491 aaKnown RBP19.83■□□□□ 0.76
Ufd1-202ENSMUST00000115578 Cecr2E9Q2Z1 1453 aa19.48■□□□□ 0.71
Ufd1-202ENSMUST00000115578 Ccdc136Q3TVA9 1136 aa19.4■□□□□ 0.7
Ufd1-202ENSMUST00000115578 Smarca4Q3TKT4 1613 aaKnown RBP19.28■□□□□ 0.68
Ufd1-202ENSMUST00000115578 Synj1Q8CHC4 1574 aa19.19■□□□□ 0.66
Ufd1-202ENSMUST00000115578 Brd4Q9ESU6 1400 aaKnown RBP19.17■□□□□ 0.66
Ufd1-202ENSMUST00000115578 Pds5bQ4VA53 1446 aaKnown RBP19.14■□□□□ 0.65
Ufd1-202ENSMUST00000115578 Atad2bE9Q166 1460 aaKnown RBP19.14■□□□□ 0.65
Ufd1-202ENSMUST00000115578 CftrP26361 1476 aa19.13■□□□□ 0.65
Ufd1-202ENSMUST00000115578 Cttnbp2B9EJA2 1648 aa19.1■□□□□ 0.65
Ufd1-202ENSMUST00000115578 Iqgap2Q3UQ44 1575 aa19.1■□□□□ 0.65
Ufd1-202ENSMUST00000115578 Rpgrip1Q9EPQ2 1331 aa19.07■□□□□ 0.64
Ufd1-202ENSMUST00000115578 Trim41Q5NCC3 630 aa19.06■□□□□ 0.64
Ufd1-202ENSMUST00000115578 Thoc2B1AZI6 1594 aaKnown RBP18.87■□□□□ 0.61
Ufd1-202ENSMUST00000115578 Wdr62Q3U3T8 1523 aa18.84■□□□□ 0.61
Ufd1-202ENSMUST00000115578 Frmpd1A2AKB4 1549 aa18.81■□□□□ 0.6
Ufd1-202ENSMUST00000115578 Golga3P55937 1487 aa18.79■□□□□ 0.6
Ufd1-202ENSMUST00000115578 Top2bQ64511 1612 aa18.78■□□□□ 0.6
Ufd1-202ENSMUST00000115578 Ercc6F8VPZ5 1481 aa18.74■□□□□ 0.59
Ufd1-202ENSMUST00000115578 Unc13aQ4KUS2 1712 aa18.71■□□□□ 0.59
Ufd1-202ENSMUST00000115578 HrcG5E8J6 738 aa18.65■□□□□ 0.58
Ufd1-202ENSMUST00000115578 Esf1Q3V1V3 845 aaKnown RBP18.63■□□□□ 0.57
Ufd1-202ENSMUST00000115578 Cc2d2aQ8CFW7 1633 aa18.59■□□□□ 0.57
Ufd1-202ENSMUST00000115578 Cngb1E1AZ71 1325 aa18.58■□□□□ 0.57
Ufd1-202ENSMUST00000115578 Fam135aQ6NS59 1506 aa18.54■□□□□ 0.56
Ufd1-202ENSMUST00000115578 Rsf1E9PWW9 1441 aaKnown RBP18.54■□□□□ 0.56
Ufd1-202ENSMUST00000115578 Ccdc88bQ4QRL3 1481 aa18.52■□□□□ 0.56
Ufd1-202ENSMUST00000115578 TnnQ80Z71 1560 aa18.46■□□□□ 0.55
Ufd1-202ENSMUST00000115578 Phldb1Q6PDH0 1371 aaKnown RBP18.45■□□□□ 0.54
Ufd1-202ENSMUST00000115578 Fmn1Q05860 1466 aa18.44■□□□□ 0.54
Ufd1-202ENSMUST00000115578 Cep164Q5DU05 1446 aa18.43■□□□□ 0.54
Ufd1-202ENSMUST00000115578 Dnajc5bQ9CQ94 199 aa18.43■□□□□ 0.54
Ufd1-202ENSMUST00000115578 Lamc3Q9R0B6 1581 aa18.42■□□□□ 0.54
Ufd1-202ENSMUST00000115578 Chic1Q8CBW7 227 aa18.42■□□□□ 0.54
Ufd1-202ENSMUST00000115578 Top2aQ01320 1528 aaKnown RBP18.28■□□□□ 0.52
Ufd1-202ENSMUST00000115578 Kif15Q6P9L6 1387 aa18.26■□□□□ 0.51
Ufd1-202ENSMUST00000115578 Baz1bQ9Z277 1479 aa18.22■□□□□ 0.51
Ufd1-202ENSMUST00000115578 Ubl4bQ9CQ84 188 aa18.19■□□□□ 0.5
Ufd1-202ENSMUST00000115578 Camsap1A2AHC3 1581 aa18.18■□□□□ 0.5
Ufd1-202ENSMUST00000115578 Acin1Q9JIX8 1338 aaKnown RBP18.17■□□□□ 0.5
Ufd1-202ENSMUST00000115578 Cux2P70298 1426 aa18.13■□□□□ 0.49
Ufd1-202ENSMUST00000115578 Mrc2Q64449 1479 aa18.05■□□□□ 0.48
Ufd1-202ENSMUST00000115578 Ccdc18Q640L5 1455 aa18.03■□□□□ 0.48
Ufd1-202ENSMUST00000115578 Gab3Q8BSM5 595 aa17.99■□□□□ 0.47
Ufd1-202ENSMUST00000115578 Rapgef2Q8CHG7 1496 aa17.98■□□□□ 0.47
Ufd1-202ENSMUST00000115578 Grin2bQ01097 1482 aa17.96■□□□□ 0.47
Ufd1-202ENSMUST00000115578 Kif21aQ9QXL2 1672 aa17.94■□□□□ 0.46
Ufd1-202ENSMUST00000115578 PtprkP35822 1457 aa17.93■□□□□ 0.46
Ufd1-202ENSMUST00000115578 Il27Q8K3I6 234 aa17.92■□□□□ 0.46
Ufd1-202ENSMUST00000115578 NrkQ9R0G8 1455 aa17.92■□□□□ 0.46
Ufd1-202ENSMUST00000115578 Eif4g1Q6NZJ6 1600 aaKnown RBP17.92■□□□□ 0.46
Ufd1-202ENSMUST00000115578 LrpprcQ6PB66 1392 aaKnown RBP17.88■□□□□ 0.45
Ufd1-202ENSMUST00000115578 Shroom4Q1W617 1475 aa17.87■□□□□ 0.45
Ufd1-202ENSMUST00000115578 Npm1Q61937 292 aaKnown RBP17.86■□□□□ 0.45
Ufd1-202ENSMUST00000115578 PogzQ8BZH4 1409 aaKnown RBP17.85■□□□□ 0.45
Ufd1-202ENSMUST00000115578 Cep162Q6ZQ06 1403 aa17.81■□□□□ 0.44
Ufd1-202ENSMUST00000115578 Duox2A2AQ99 1517 aa17.8■□□□□ 0.44
Ufd1-202ENSMUST00000115578 Dhx29Q6PGC1 1365 aaKnown RBP17.79■□□□□ 0.44
Ufd1-202ENSMUST00000115578 Crocc2F6XLV1 1638 aa17.77■□□□□ 0.43
Ufd1-202ENSMUST00000115578 Efcab5A0JP43 1406 aa17.75■□□□□ 0.43
Ufd1-202ENSMUST00000115578 Arhgap35Q91YM2 1499 aa17.75■□□□□ 0.43
Ufd1-202ENSMUST00000115578 Samd9lQ69Z37 1561 aa17.74■□□□□ 0.43
Ufd1-202ENSMUST00000115578 Lrriq1Q0P5X1 1673 aa17.69■□□□□ 0.42
Ufd1-202ENSMUST00000115578 Mroh2bQ7M6Y6 1581 aa17.68■□□□□ 0.42
Ufd1-202ENSMUST00000115578 Map3k1P53349 1493 aa17.67■□□□□ 0.42
Ufd1-202ENSMUST00000115578 Npm2Q80W85 207 aa17.66■□□□□ 0.42
Ufd1-202ENSMUST00000115578 Urb2E9Q7L1 1524 aaKnown RBP17.65■□□□□ 0.42
Ufd1-202ENSMUST00000115578 Plb1Q3TTY0 1478 aa17.63■□□□□ 0.41
Ufd1-202ENSMUST00000115578 Pcgf6Q99NA9 353 aa17.61■□□□□ 0.41
Ufd1-202ENSMUST00000115578 SynmQ70IV5 1561 aa17.59■□□□□ 0.41
Ufd1-202ENSMUST00000115578 Setd1bQ8CFT2 1985 aa17.58■□□□□ 0.4
Ufd1-202ENSMUST00000115578 AqrQ8CFQ3 1481 aaKnown RBP17.56■□□□□ 0.4
Ufd1-202ENSMUST00000115578 Rad54l2Q99NG0 1466 aa17.55■□□□□ 0.4
Ufd1-202ENSMUST00000115578 Magi3Q9EQJ9 1476 aa17.52■□□□□ 0.4
Ufd1-202ENSMUST00000115578 Disp1Q3TDN0 1521 aa17.52■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Myt1lP97500 1187 aa17.51■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Gpatch8A2A6A1 1505 aa17.49■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Pla2r1Q62028 1487 aa17.49■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Ift140E9PY46 1464 aa17.47■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Clip1Q922J3 1391 aa17.47■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Carmil1Q6EDY6 1374 aa17.46■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Pbrm1Q8BSQ9 1634 aaKnown RBP17.46■□□□□ 0.39
Ufd1-202ENSMUST00000115578 Grin2aP35436 1464 aa17.45■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 153.9 ms