RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 Krtap28-13A0A087WQP5 138 aa6.72□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Dmrtb1A2A9I7 359 aa6.72□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Kif3bQ61771 747 aa6.72□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 GphnQ8BUV3 769 aaKnown RBP6.72□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Zbtb7cQ8VCZ7 619 aa6.72□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 GmprQ9DCZ1 345 aa6.72□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Znf518aB2RRF6 1478 aaKnown RBP6.71□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Arhgap23Q69ZH9 1483 aa6.71□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Xrn1P97789 1719 aaKnown RBP6.71□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Caskin1Q6P9K8 1431 aa6.71□□□□□ -1.33
Hmgb1-203ENSMUST00000110505 Nek1P51954 1203 aa6.71□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Ppp1r3fQ9JIG4 799 aa6.71□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 DroshaQ5HZJ0 1373 aaKnown RBP6.71□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Pdcd11Q6NS46 1862 aaKnown RBP6.71□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Med14A2ABV5 1459 aaKnown RBP6.71□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Q9CYS6 286 aa6.7□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Rrp7aQ9D1C9 280 aaKnown RBP6.7□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Speer3W4VSP1 261 aa6.7□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Ccnb3Q810T2 1396 aa6.7□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Naip5Q9R016 1403 aa6.7□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Ppfia1B2RXQ2 1266 aa6.7□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Plcd4Q8K3R3 807 aa6.7□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Nop53Q8BK35 484 aaKnown RBP6.69□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Trim47Q8C0E3 641 aa6.69□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Cdan1Q8CC12 1239 aa6.69□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Spns2Q91VM4 549 aa6.69□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Spaca7Q9D2S4 182 aa6.69□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Naip1Q9QWK5 1403 aa6.69□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Krtap28-10A0A1Y7VP58 119 aa6.68□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 P01644 108 aa6.68□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Irs1P35569 1233 aa6.68□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Arid4bA2CG63 1314 aaKnown RBP6.68□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Abcc6Q9R1S7 1498 aa6.68□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Nfx1B1AY10 1114 aaKnown RBP6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 AlyrefO08583 255 aaKnown RBP6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Irf5P56477 497 aa6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Leng1Q9DB98 261 aa6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 PzpQ61838 1495 aa6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Bmp1P98063 991 aa6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Znf511Q6P0X2 227 aa6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Tll2Q9WVM6 1012 aa6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Zc3h13E9Q784 1729 aaKnown RBP6.67□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Pik3r2O08908 722 aa6.66□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Adamts19P59509 1210 aa6.66□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Epb42P49222 691 aa6.65□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Atf4Q06507 349 aa6.65□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Amigo3Q8C2S7 508 aa6.65□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Pcdhb16Q91Y03 802 aa6.65□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Uggt2E9Q4X2 1504 aa6.65□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Topbp1Q6ZQF0 1515 aa6.65□□□□□ -1.34
Hmgb1-203ENSMUST00000110505 Fmn2Q9JL04 1578 aa6.65□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Dsc3P55850 896 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 PtprnQ60673 979 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Chtf18Q8BIW9 969 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Usp3Q91W36 520 aaKnown RBP6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Lmtk2Q3TYD6 1471 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Iqgap1Q9JKF1 1657 aaKnown RBP6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 HrcG5E8J6 738 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 NppbP40753 121 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 MetrnlQ8VE43 311 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Tubgcp6G5E8P0 1769 aa6.64□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Hfm1D3Z4R1 1434 aa6.63□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Cypt2Q6P924 180 aa6.63□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Fnbp4Q6ZQ03 1031 aa6.63□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 5730596B20RikQ8BQ08 205 aa6.63□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Apbb1Q9QXJ1 710 aa6.63□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Robo2Q7TPD3 1470 aa6.63□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Asxl1P59598 1514 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Nrxn3Q6P9K9 1571 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 PrkcshO08795 521 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Dsg2O55111 1122 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Cdk11bP24788 784 aaKnown RBP6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Pcdhb3Q91XZ7 784 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Fam174aQ9D3L0 190 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Adgrb2Q8CGM1 1561 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 A030005K14RikA0A1Y7VNY1 122 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Vmn1r194J3JS27 296 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Ccdc102aQ3TMW1 549 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Igflr1Q3U4N7 345 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Kmt5bQ3U8K7 883 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Lrig3Q6P1C6 1117 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Themis2Q91YX0 663 aa6.62□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Spag9Q58A65 1321 aaKnown RBP6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Plch2A2AP18 1501 aa6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Usp54Q8BL06 1588 aaKnown RBP6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Rhox1B1APN4 224 aa6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Hcn4O70507 1186 aa6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Tom1O88746 492 aa6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 JundP15066 341 aa6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Fut2Q9JL27 347 aa6.61□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Fgd1P52734 960 aa6.6□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Zbtb42Q811H0 420 aa6.6□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Fbxo18Q8K2I9 1042 aa6.6□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Slit2Q9R1B9 1521 aa6.6□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 DnmbpQ6TXD4 1580 aa6.6□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Med1Q925J9 1575 aa6.6□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Chd2E9PZM4 1827 aaKnown RBP6.59□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Mtus2Q3UHD3 1353 aa6.59□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 Msx1P13297 303 aa6.59□□□□□ -1.35
Hmgb1-203ENSMUST00000110505 WasP70315 520 aa6.59□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms