Protein–RNA interactions for Protein: Q8CC12

Cdan1, Codanin-1, mousemouse

Predictions only

Length 1,239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdan1Q8CC12 Gm25239-201ENSMUST00000174915 86 ntBASIC43.25■■■■■ 4.51
Cdan1Q8CC12 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.83■■■■□ 3.97
Cdan1Q8CC12 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.36■■■■□ 3.89
Cdan1Q8CC12 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
Cdan1Q8CC12 Gm15042-201ENSMUST00000120212 883 ntBASIC38.16■■■■□ 3.7
Cdan1Q8CC12 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Cdan1Q8CC12 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37.55■■■■□ 3.6
Cdan1Q8CC12 Gm15045-201ENSMUST00000117359 883 ntBASIC37.34■■■■□ 3.57
Cdan1Q8CC12 Gm24109-201ENSMUST00000175489 103 ntBASIC37.3■■■■□ 3.56
Cdan1Q8CC12 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Cdan1Q8CC12 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.48■■■■□ 3.43
Cdan1Q8CC12 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Cdan1Q8CC12 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Cdan1Q8CC12 Gm23366-201ENSMUST00000175022 89 ntBASIC36.21■■■■□ 3.39
Cdan1Q8CC12 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.98■■■■□ 3.35
Cdan1Q8CC12 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
Cdan1Q8CC12 Psd-208ENSMUST00000224556 2034 ntBASIC35.84■■■■□ 3.33
Cdan1Q8CC12 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.69■■■■□ 3.3
Cdan1Q8CC12 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
Cdan1Q8CC12 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
Cdan1Q8CC12 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
Cdan1Q8CC12 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Cdan1Q8CC12 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.29■■■■□ 3.24
Cdan1Q8CC12 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.27■■■■□ 3.24
Cdan1Q8CC12 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
Cdan1Q8CC12 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.16■■■■□ 3.22
Cdan1Q8CC12 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.14■■■■□ 3.22
Cdan1Q8CC12 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
Cdan1Q8CC12 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.01■■■■□ 3.2
Cdan1Q8CC12 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
Cdan1Q8CC12 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Cdan1Q8CC12 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.65■■■■□ 3.14
Cdan1Q8CC12 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.5■■■■□ 3.11
Cdan1Q8CC12 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Cdan1Q8CC12 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.4■■■■□ 3.1
Cdan1Q8CC12 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.26■■■■□ 3.08
Cdan1Q8CC12 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Cdan1Q8CC12 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Cdan1Q8CC12 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.05■■■■□ 3.04
Cdan1Q8CC12 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Cdan1Q8CC12 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.01■■■■□ 3.03
Cdan1Q8CC12 Gm25238-201ENSMUST00000174914 89 ntBASIC34.01■■■■□ 3.03
Cdan1Q8CC12 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Cdan1Q8CC12 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.93■■■■□ 3.02
Cdan1Q8CC12 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Cdan1Q8CC12 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Cdan1Q8CC12 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.65■■■□□ 2.98
Cdan1Q8CC12 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Cdan1Q8CC12 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Cdan1Q8CC12 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.96
Cdan1Q8CC12 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Cdan1Q8CC12 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.51■■■□□ 2.95
Cdan1Q8CC12 Gm27325-201ENSMUST00000175467 74 ntBASIC33.49■■■□□ 2.95
Cdan1Q8CC12 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.46■■■□□ 2.95
Cdan1Q8CC12 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
Cdan1Q8CC12 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Cdan1Q8CC12 Gm10524-201ENSMUST00000181931 1893 ntBASIC33.37■■■□□ 2.93
Cdan1Q8CC12 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Cdan1Q8CC12 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
Cdan1Q8CC12 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.25■■■□□ 2.91
Cdan1Q8CC12 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Cdan1Q8CC12 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Cdan1Q8CC12 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Cdan1Q8CC12 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.12■■■□□ 2.89
Cdan1Q8CC12 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
Cdan1Q8CC12 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.08■■■□□ 2.89
Cdan1Q8CC12 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Cdan1Q8CC12 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
Cdan1Q8CC12 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Cdan1Q8CC12 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.02■■■□□ 2.88
Cdan1Q8CC12 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Cdan1Q8CC12 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
Cdan1Q8CC12 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.87■■■□□ 2.85
Cdan1Q8CC12 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
Cdan1Q8CC12 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cdan1Q8CC12 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Cdan1Q8CC12 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.73■■■□□ 2.83
Cdan1Q8CC12 Rab21-202ENSMUST00000218831 843 ntBASIC32.67■■■□□ 2.82
Cdan1Q8CC12 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.65■■■□□ 2.82
Cdan1Q8CC12 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Cdan1Q8CC12 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cdan1Q8CC12 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cdan1Q8CC12 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.53■■■□□ 2.8
Cdan1Q8CC12 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Cdan1Q8CC12 Gm25262-201ENSMUST00000174934 133 ntBASIC32.45■■■□□ 2.79
Cdan1Q8CC12 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Cdan1Q8CC12 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Cdan1Q8CC12 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Cdan1Q8CC12 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Cdan1Q8CC12 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Cdan1Q8CC12 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.26■■■□□ 2.75
Cdan1Q8CC12 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Cdan1Q8CC12 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Cdan1Q8CC12 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.15■■■□□ 2.74
Cdan1Q8CC12 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Cdan1Q8CC12 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Cdan1Q8CC12 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Cdan1Q8CC12 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Cdan1Q8CC12 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Cdan1Q8CC12 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms